PDB Short entry for 1L2J HEADER TRANSCRIPTION RECEPTOR 21-FEB-02 1L2J TITLE HUMAN ESTROGEN RECEPTOR BETA LIGAND-BINDING DOMAIN IN COMPLEX WITH (R, TITLE 2 R)-5,11-CIS-DIETHYL-5,6,11,12-TETRAHYDROCHRYSENE-2,8-DIOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR BETA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LIGAND-BINDING DOMAIN (RESIDUES 256-505); COMPND 5 SYNONYM: ER-BETA, OESTROGEN RECEPTOR BETA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS NUCLEAR RECEPTOR, TRANSCRIPTION FACTOR, ESTROGEN, ANTAGONIST, KEYWDS 2 TRANSCRIPTION RECEPTOR EXPDTA X-RAY DIFFRACTION AUTHOR A.K.SHIAU,D.BARSTAD,J.T.RADEK,M.J.MEYERS,K.W.NETTLES, AUTHOR 2 B.S.KATZENELLENBOGEN,J.A.KATZENELLENBOGEN,D.A.AGARD,G.L.GREENE REVDAT 4 16-AUG-23 1L2J 1 REMARK SEQADV REVDAT 3 13-JUL-11 1L2J 1 VERSN REVDAT 2 24-FEB-09 1L2J 1 VERSN REVDAT 1 01-MAY-02 1L2J 0 JRNL AUTH A.K.SHIAU,D.BARSTAD,J.T.RADEK,M.J.MEYERS,K.W.NETTLES, JRNL AUTH 2 B.S.KATZENELLENBOGEN,J.A.KATZENELLENBOGEN,D.A.AGARD, JRNL AUTH 3 G.L.GREENE JRNL TITL STRUCTURAL CHARACTERIZATION OF A SUBTYPE-SELECTIVE LIGAND JRNL TITL 2 REVEALS A NOVEL MODE OF ESTROGEN RECEPTOR ANTAGONISM. JRNL REF NAT.STRUCT.BIOL. V. 9 359 2002 JRNL REFN ISSN 1072-8368 JRNL PMID 11953755 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.C.W.PIKE,A.M.BRZOZOWSKI,R.E.HUBBARD,T.BONN,A.G.THORSELL, REMARK 1 AUTH 2 O.ENGSTROM,J.LJUNGGREN,J.A.GUSTAFSSON,M.CARLQUIST REMARK 1 TITL STRUCTURE OF THE LIGAND-BINDING DOMAIN OF OESTROGEN RECEPTOR REMARK 1 TITL 2 BETA IN THE PRESENCE OF A PARTIAL AGONIST AND A FULL REMARK 1 TITL 3 ANTAGONIST REMARK 1 REF EMBO J. V. 18 4608 1999 REMARK 1 REFN ISSN 0261-4189 REMARK 1 DOI 10.1093/EMBOJ/18.17.4608 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.J.MEYERS,J.SUN,K.E.CARLSON,B.S.KATZENELLENBOGEN, REMARK 1 AUTH 2 J.A.KATZENELLENBOGEN REMARK 1 TITL ESTROGEN RECEPTOR SUBTYPE-SELECTIVE LIGANDS: ASYMMETRIC REMARK 1 TITL 2 SYNTHESIS AND BIOLOGICAL EVALUATION OF CIS- AND REMARK 1 TITL 3 TRANS-5,11-DIALKYL-5,6,11,12-TETRAHYDROCHRYSENES REMARK 1 REF J.MED.CHEM. V. 42 2456 1999 REMARK 1 REFN ISSN 0022-2623 REMARK 1 DOI 10.1021/JM990101B REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 14893 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.259 REMARK 3 FREE R VALUE : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 741 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.011 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.06 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1445 REMARK 3 BIN R VALUE (WORKING SET) : 0.3397 REMARK 3 BIN FREE R VALUE : 0.3509 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 65 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.044 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3402 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 9 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 12.43400 REMARK 3 B22 (A**2) : 12.43400 REMARK 3 B33 (A**2) : -24.86700 REMARK 3 B12 (A**2) : 5.66200 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM SIGMAA (A) : 0.54 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.51 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.53 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.290 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 17.92 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.850 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.793 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.071 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.672 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.115 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 33.13 REMARK 3 REMARK 3 NCS MODEL : CONSTRAINED REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE WAS REFINED AGAINST DATA REMARK 3 WHICH HAD BEEN SHARPENED WITH A -55 A**2 CORRECTION FACTOR. REMARK 4 REMARK 4 1L2J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-02. REMARK 100 THE DEPOSITION ID IS D_1000015583. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-99 REMARK 200 TEMPERATURE (KELVIN) : 103 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.07 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14895 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 49.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.30200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRIES 1A52, 1ERE, 1ERR, 3ERD, 3ERT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5-1.75 M AMMONIUM SULFATE, 100 MM REMARK 280 SODIUM ACETATE PH 4.8-5.2 294-296 K, PH 4.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.57200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.62041 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 64.46100 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 49.57200 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 28.62041 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 64.46100 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 49.57200 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 28.62041 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 64.46100 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.24082 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 128.92200 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 57.24082 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 128.92200 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 57.24082 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 128.92200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A HOMODIMER WHICH IS NOT REMARK 300 OBSERVED IN THE CRYSTAL. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 49.57200 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 85.86122 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -49.57200 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 85.86122 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 235 REMARK 465 GLY A 236 REMARK 465 SER A 237 REMARK 465 SER A 238 REMARK 465 HIS A 239 REMARK 465 HIS A 240 REMARK 465 HIS A 241 REMARK 465 HIS A 242 REMARK 465 HIS A 243 REMARK 465 HIS A 244 REMARK 465 SER A 245 REMARK 465 SER A 246 REMARK 465 GLY A 247 REMARK 465 LEU A 248 REMARK 465 VAL A 249 REMARK 465 PRO A 250 REMARK 465 ARG A 251 REMARK 465 GLY A 252 REMARK 465 SER A 253 REMARK 465 HIS A 254 REMARK 465 MET A 255 REMARK 465 ARG A 256 REMARK 465 GLU A 257 REMARK 465 LEU A 258 REMARK 465 LEU A 259 REMARK 465 LEU A 260 REMARK 465 PRO A 285 REMARK 465 SER A 286 REMARK 465 ALA A 287 REMARK 465 PRO A 288 REMARK 465 PHE A 289 REMARK 465 SER A 409 REMARK 465 MET A 410 REMARK 465 TYR A 411 REMARK 465 PRO A 412 REMARK 465 GLY A 502 REMARK 465 CYS A 503 REMARK 465 LYS A 504 REMARK 465 SER A 505 REMARK 465 MET B 235 REMARK 465 GLY B 236 REMARK 465 SER B 237 REMARK 465 SER B 238 REMARK 465 HIS B 239 REMARK 465 HIS B 240 REMARK 465 HIS B 241 REMARK 465 HIS B 242 REMARK 465 HIS B 243 REMARK 465 HIS B 244 REMARK 465 SER B 245 REMARK 465 SER B 246 REMARK 465 GLY B 247 REMARK 465 LEU B 248 REMARK 465 VAL B 249 REMARK 465 PRO B 250 REMARK 465 ARG B 251 REMARK 465 GLY B 252 REMARK 465 SER B 253 REMARK 465 HIS B 254 REMARK 465 LEU B 281 REMARK 465 ILE B 282 REMARK 465 SER B 283 REMARK 465 ARG B 284 REMARK 465 PRO B 285 REMARK 465 SER B 286 REMARK 465 ALA B 287 REMARK 465 PRO B 288 REMARK 465 PHE B 289 REMARK 465 THR B 290 REMARK 465 GLU B 291 REMARK 465 ALA B 292 REMARK 465 SER B 293 REMARK 465 TYR B 411 REMARK 465 PRO B 412 REMARK 465 LYS B 480 REMARK 465 CYS B 481 REMARK 465 LYS B 482 REMARK 465 ASN B 483 REMARK 465 VAL B 484 REMARK 465 HIS B 498 REMARK 465 VAL B 499 REMARK 465 LEU B 500 REMARK 465 ARG B 501 REMARK 465 GLY B 502 REMARK 465 CYS B 503 REMARK 465 LYS B 504 REMARK 465 SER B 505 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 263 CG CD1 CD2 REMARK 470 GLN A 267 CG CD OE1 NE2 REMARK 470 GLU A 274 CG CD OE1 OE2 REMARK 470 HIS A 279 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A 281 CG CD1 CD2 REMARK 470 SER A 283 OG REMARK 470 ARG A 284 CG CD NE CZ NH1 NH2 REMARK 470 THR A 290 OG1 CG2 REMARK 470 GLU A 291 CG CD OE1 OE2 REMARK 470 GLU A 321 CG CD OE1 OE2 REMARK 470 SER A 333 OG REMARK 470 ASP A 359 CG OD1 OD2 REMARK 470 ASP A 365 CG OD1 OD2 REMARK 470 LYS A 368 CG CD CE NZ REMARK 470 GLU A 371 CG CD OE1 OE2 REMARK 470 LEU A 374 CG CD1 CD2 REMARK 470 ARG A 424 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 477 CG CD1 CD2 REMARK 470 ASN A 478 CG OD1 ND2 REMARK 470 MET A 479 CG SD CE REMARK 470 LYS A 480 CG CD CE NZ REMARK 470 CYS A 481 SG REMARK 470 ASN A 483 CG OD1 ND2 REMARK 470 TYR A 488 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 501 CG CD NE CZ NH1 NH2 REMARK 470 MET B 255 CG SD CE REMARK 470 GLU B 257 CG CD OE1 OE2 REMARK 470 LEU B 258 CG CD1 CD2 REMARK 470 VAL B 280 CG1 CG2 REMARK 470 MET B 296 CG SD CE REMARK 470 SER B 297 OG REMARK 470 LYS B 304 CG CD CE NZ REMARK 470 SER B 333 OG REMARK 470 LYS B 353 CG CD CE NZ REMARK 470 ASP B 359 CG OD1 OD2 REMARK 470 ARG B 364 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 365 CG OD1 OD2 REMARK 470 GLU B 366 CG CD OE1 OE2 REMARK 470 LYS B 368 CG CD CE NZ REMARK 470 VAL B 370 CG1 CG2 REMARK 470 GLU B 371 CG CD OE1 OE2 REMARK 470 GLU B 375 CG CD OE1 OE2 REMARK 470 ARG B 386 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 389 CG CD OE1 OE2 REMARK 470 MET B 410 CG SD CE REMARK 470 LEU B 413 CG CD1 CD2 REMARK 470 ARG B 424 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 450 CG CD OE1 NE2 REMARK 470 LEU B 477 CG CD1 CD2 REMARK 470 ASN B 478 CG OD1 ND2 REMARK 470 MET B 479 CG SD CE REMARK 470 TYR B 488 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 493 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 265 -70.68 -46.14 REMARK 500 ILE A 282 114.42 -165.88 REMARK 500 PRO A 351 148.53 -36.87 REMARK 500 GLU A 371 108.30 -49.28 REMARK 500 ILE A 446 165.83 -49.17 REMARK 500 LEU A 477 37.67 -88.75 REMARK 500 ASN A 478 46.94 170.66 REMARK 500 LYS A 482 -45.12 -142.04 REMARK 500 LEU A 500 -77.25 -75.99 REMARK 500 MET B 295 -36.92 -31.72 REMARK 500 PRO B 351 148.55 -36.39 REMARK 500 GLU B 371 108.00 -47.09 REMARK 500 LEU B 390 -5.02 -56.56 REMARK 500 SER B 408 -50.05 -14.97 REMARK 500 ILE B 446 166.57 -49.05 REMARK 500 ASN B 478 47.94 -140.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ETC A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ETC B 800 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1QKM RELATED DB: PDB REMARK 900 HUMAN ESTROGEN RECEPTOR BETA LIGAND-BINDING DOMAIN IN COMPLEX WITH REMARK 900 GENISTEIN REMARK 900 RELATED ID: 1L2I RELATED DB: PDB REMARK 900 HUMAN ESTROGEN RECEPTOR ALPHA LIGAND-BINDING DOMAIN IN COMPLEX WITH REMARK 900 (R,R)-5,11-CIS-DIETHYL-5,6,11,12-TETRAHYDROCHRYSENE-2,8-DIOL AND A REMARK 900 GLUCOCORTICOID RECEPTOR INTERACTING PROTEIN 1 NR BOX II PEPTIDE DBREF 1L2J A 256 505 UNP Q92731 ESR2_HUMAN 256 505 DBREF 1L2J B 256 505 UNP Q92731 ESR2_HUMAN 256 505 SEQADV 1L2J MET A 235 UNP Q92731 EXPRESSION TAG SEQADV 1L2J GLY A 236 UNP Q92731 EXPRESSION TAG SEQADV 1L2J SER A 237 UNP Q92731 EXPRESSION TAG SEQADV 1L2J SER A 238 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS A 239 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS A 240 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS A 241 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS A 242 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS A 243 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS A 244 UNP Q92731 EXPRESSION TAG SEQADV 1L2J SER A 245 UNP Q92731 EXPRESSION TAG SEQADV 1L2J SER A 246 UNP Q92731 EXPRESSION TAG SEQADV 1L2J GLY A 247 UNP Q92731 EXPRESSION TAG SEQADV 1L2J LEU A 248 UNP Q92731 EXPRESSION TAG SEQADV 1L2J VAL A 249 UNP Q92731 EXPRESSION TAG SEQADV 1L2J PRO A 250 UNP Q92731 EXPRESSION TAG SEQADV 1L2J ARG A 251 UNP Q92731 EXPRESSION TAG SEQADV 1L2J GLY A 252 UNP Q92731 EXPRESSION TAG SEQADV 1L2J SER A 253 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS A 254 UNP Q92731 EXPRESSION TAG SEQADV 1L2J MET A 255 UNP Q92731 EXPRESSION TAG SEQADV 1L2J MET B 235 UNP Q92731 EXPRESSION TAG SEQADV 1L2J GLY B 236 UNP Q92731 EXPRESSION TAG SEQADV 1L2J SER B 237 UNP Q92731 EXPRESSION TAG SEQADV 1L2J SER B 238 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS B 239 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS B 240 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS B 241 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS B 242 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS B 243 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS B 244 UNP Q92731 EXPRESSION TAG SEQADV 1L2J SER B 245 UNP Q92731 EXPRESSION TAG SEQADV 1L2J SER B 246 UNP Q92731 EXPRESSION TAG SEQADV 1L2J GLY B 247 UNP Q92731 EXPRESSION TAG SEQADV 1L2J LEU B 248 UNP Q92731 EXPRESSION TAG SEQADV 1L2J VAL B 249 UNP Q92731 EXPRESSION TAG SEQADV 1L2J PRO B 250 UNP Q92731 EXPRESSION TAG SEQADV 1L2J ARG B 251 UNP Q92731 EXPRESSION TAG SEQADV 1L2J GLY B 252 UNP Q92731 EXPRESSION TAG SEQADV 1L2J SER B 253 UNP Q92731 EXPRESSION TAG SEQADV 1L2J HIS B 254 UNP Q92731 EXPRESSION TAG SEQADV 1L2J MET B 255 UNP Q92731 EXPRESSION TAG SEQRES 1 A 271 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 271 LEU VAL PRO ARG GLY SER HIS MET ARG GLU LEU LEU LEU SEQRES 3 A 271 ASP ALA LEU SER PRO GLU GLN LEU VAL LEU THR LEU LEU SEQRES 4 A 271 GLU ALA GLU PRO PRO HIS VAL LEU ILE SER ARG PRO SER SEQRES 5 A 271 ALA PRO PHE THR GLU ALA SER MET MET MET SER LEU THR SEQRES 6 A 271 LYS LEU ALA ASP LYS GLU LEU VAL HIS MET ILE SER TRP SEQRES 7 A 271 ALA LYS LYS ILE PRO GLY PHE VAL GLU LEU SER LEU PHE SEQRES 8 A 271 ASP GLN VAL ARG LEU LEU GLU SER CYS TRP MET GLU VAL SEQRES 9 A 271 LEU MET MET GLY LEU MET TRP ARG SER ILE ASP HIS PRO SEQRES 10 A 271 GLY LYS LEU ILE PHE ALA PRO ASP LEU VAL LEU ASP ARG SEQRES 11 A 271 ASP GLU GLY LYS CYS VAL GLU GLY ILE LEU GLU ILE PHE SEQRES 12 A 271 ASP MET LEU LEU ALA THR THR SER ARG PHE ARG GLU LEU SEQRES 13 A 271 LYS LEU GLN HIS LYS GLU TYR LEU CYS VAL LYS ALA MET SEQRES 14 A 271 ILE LEU LEU ASN SER SER MET TYR PRO LEU VAL THR ALA SEQRES 15 A 271 THR GLN ASP ALA ASP SER SER ARG LYS LEU ALA HIS LEU SEQRES 16 A 271 LEU ASN ALA VAL THR ASP ALA LEU VAL TRP VAL ILE ALA SEQRES 17 A 271 LYS SER GLY ILE SER SER GLN GLN GLN SER MET ARG LEU SEQRES 18 A 271 ALA ASN LEU LEU MET LEU LEU SER HIS VAL ARG HIS ALA SEQRES 19 A 271 SER ASN LYS GLY MET GLU HIS LEU LEU ASN MET LYS CYS SEQRES 20 A 271 LYS ASN VAL VAL PRO VAL TYR ASP LEU LEU LEU GLU MET SEQRES 21 A 271 LEU ASN ALA HIS VAL LEU ARG GLY CYS LYS SER SEQRES 1 B 271 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 271 LEU VAL PRO ARG GLY SER HIS MET ARG GLU LEU LEU LEU SEQRES 3 B 271 ASP ALA LEU SER PRO GLU GLN LEU VAL LEU THR LEU LEU SEQRES 4 B 271 GLU ALA GLU PRO PRO HIS VAL LEU ILE SER ARG PRO SER SEQRES 5 B 271 ALA PRO PHE THR GLU ALA SER MET MET MET SER LEU THR SEQRES 6 B 271 LYS LEU ALA ASP LYS GLU LEU VAL HIS MET ILE SER TRP SEQRES 7 B 271 ALA LYS LYS ILE PRO GLY PHE VAL GLU LEU SER LEU PHE SEQRES 8 B 271 ASP GLN VAL ARG LEU LEU GLU SER CYS TRP MET GLU VAL SEQRES 9 B 271 LEU MET MET GLY LEU MET TRP ARG SER ILE ASP HIS PRO SEQRES 10 B 271 GLY LYS LEU ILE PHE ALA PRO ASP LEU VAL LEU ASP ARG SEQRES 11 B 271 ASP GLU GLY LYS CYS VAL GLU GLY ILE LEU GLU ILE PHE SEQRES 12 B 271 ASP MET LEU LEU ALA THR THR SER ARG PHE ARG GLU LEU SEQRES 13 B 271 LYS LEU GLN HIS LYS GLU TYR LEU CYS VAL LYS ALA MET SEQRES 14 B 271 ILE LEU LEU ASN SER SER MET TYR PRO LEU VAL THR ALA SEQRES 15 B 271 THR GLN ASP ALA ASP SER SER ARG LYS LEU ALA HIS LEU SEQRES 16 B 271 LEU ASN ALA VAL THR ASP ALA LEU VAL TRP VAL ILE ALA SEQRES 17 B 271 LYS SER GLY ILE SER SER GLN GLN GLN SER MET ARG LEU SEQRES 18 B 271 ALA ASN LEU LEU MET LEU LEU SER HIS VAL ARG HIS ALA SEQRES 19 B 271 SER ASN LYS GLY MET GLU HIS LEU LEU ASN MET LYS CYS SEQRES 20 B 271 LYS ASN VAL VAL PRO VAL TYR ASP LEU LEU LEU GLU MET SEQRES 21 B 271 LEU ASN ALA HIS VAL LEU ARG GLY CYS LYS SER HET ETC A 600 24 HET ETC B 800 24 HETNAM ETC (R,R)-5,11-CIS-DIETHYL-5,6,11,12-TETRAHYDROCHRYSENE-2, HETNAM 2 ETC 8-DIOL FORMUL 3 ETC 2(C22 H24 O2) FORMUL 5 HOH *9(H2 O) HELIX 1 1 SER A 264 GLU A 276 1 13 HELIX 2 2 THR A 290 LYS A 315 1 26 HELIX 3 3 GLY A 318 LEU A 322 5 5 HELIX 4 4 SER A 323 SER A 333 1 11 HELIX 5 5 CYS A 334 SER A 347 1 14 HELIX 6 6 ASP A 365 VAL A 370 5 6 HELIX 7 7 GLY A 372 LEU A 390 1 19 HELIX 8 8 GLN A 393 SER A 408 1 16 HELIX 9 9 ALA A 416 GLN A 418 5 3 HELIX 10 10 ASP A 419 LYS A 443 1 25 HELIX 11 11 SER A 447 LEU A 477 1 31 HELIX 12 12 PRO A 486 VAL A 499 1 14 HELIX 13 13 ARG B 256 LEU B 263 1 8 HELIX 14 14 SER B 264 GLU B 276 1 13 HELIX 15 15 MET B 294 LYS B 315 1 22 HELIX 16 16 GLY B 318 LEU B 322 5 5 HELIX 17 17 SER B 323 SER B 333 1 11 HELIX 18 18 CYS B 334 SER B 347 1 14 HELIX 19 19 ASP B 365 VAL B 370 5 6 HELIX 20 20 GLY B 372 LEU B 390 1 19 HELIX 21 21 GLN B 393 SER B 408 1 16 HELIX 22 22 ALA B 416 GLN B 418 5 3 HELIX 23 23 ASP B 419 LYS B 443 1 25 HELIX 24 24 SER B 447 LEU B 477 1 31 HELIX 25 25 PRO B 486 ALA B 497 1 12 SHEET 1 A 2 LYS A 353 LEU A 354 0 SHEET 2 A 2 LEU A 362 ASP A 363 -1 O LEU A 362 N LEU A 354 SHEET 1 B 2 LYS B 353 LEU B 354 0 SHEET 2 B 2 LEU B 362 ASP B 363 -1 O LEU B 362 N LEU B 354 SITE 1 AC1 9 LEU A 298 THR A 299 GLU A 305 LEU A 339 SITE 2 AC1 9 LEU A 343 ARG A 346 GLY A 472 HIS A 475 SITE 3 AC1 9 LEU A 476 SITE 1 AC2 9 LEU B 298 THR B 299 GLU B 305 LEU B 339 SITE 2 AC2 9 LEU B 343 ARG B 346 GLY B 472 HIS B 475 SITE 3 AC2 9 LEU B 476 CRYST1 99.144 99.144 193.383 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010086 0.005823 0.000000 0.00000 SCALE2 0.000000 0.011647 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005171 0.00000