PDB Short entry for 1L43 HEADER HYDROLASE (O-GLYCOSYL) 28-JAN-91 1L43 TITLE CUMULATIVE SITE-DIRECTED CHARGE-CHANGE REPLACEMENTS IN BACTERIOPHAGE TITLE 2 T4 LYSOZYME SUGGEST THAT LONG-RANGE ELECTROSTATIC INTERACTIONS TITLE 3 CONTRIBUTE LITTLE TO PROTEIN STABILITY COMPND MOL_ID: 1; COMPND 2 MOLECULE: T4 LYSOZYME; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.17; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4; SOURCE 3 ORGANISM_TAXID: 10665; SOURCE 4 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 5 EXPRESSION_SYSTEM_PLASMID: M13 KEYWDS HYDROLASE (O-GLYCOSYL) EXPDTA X-RAY DIFFRACTION AUTHOR S.DAOPIN,B.W.MATTHEWS REVDAT 6 23-NOV-22 1L43 1 SOURCE JRNL SEQADV SCALE REVDAT 6 2 1 ATOM REVDAT 5 29-NOV-17 1L43 1 HELIX REVDAT 4 13-JUL-11 1L43 1 VERSN REVDAT 3 24-FEB-09 1L43 1 VERSN REVDAT 2 01-APR-03 1L43 1 JRNL REVDAT 1 15-OCT-91 1L43 0 JRNL AUTH D.P.SUN,E.SODERLIND,W.A.BAASE,J.A.WOZNIAK,U.SAUER, JRNL AUTH 2 B.W.MATTHEWS JRNL TITL CUMULATIVE SITE-DIRECTED CHARGE-CHANGE REPLACEMENTS IN JRNL TITL 2 BACTERIOPHAGE T4 LYSOZYME SUGGEST THAT LONG-RANGE JRNL TITL 3 ELECTROSTATIC INTERACTIONS CONTRIBUTE LITTLE TO PROTEIN JRNL TITL 4 STABILITY. JRNL REF J.MOL.BIOL. V. 221 873 1991 JRNL REFN ISSN 0022-2836 JRNL PMID 1942034 JRNL DOI 10.1016/0022-2836(91)80181-S REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.NICHOLSON,W.BECKTEL,B.W.MATTHEWS REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 1 REFERENCE 2 REMARK 1 AUTH S.DAOPIN,E.ANDERSON,W.BAASE,F.W.DAHLQUIST,B.W.MATTHEWS REMARK 1 TITL THE STRUCTURAL AND THERMODYNAMIC CONSEQUENCES OF BURYING A REMARK 1 TITL 2 CHARGED RESIDUE WITHIN THE HYDROPHOBIC CORE OF T4 LYSOZYME REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 1 REFERENCE 3 REMARK 1 AUTH X.-J.ZHANG,W.A.BAASE,B.W.MATTHEWS REMARK 1 TITL MULTIPLE STABILIZING ALANINE REPLACEMENTS WITHIN ALPHA-HELIX REMARK 1 TITL 2 126-134 OF T4 LYSOZYME HAVE INDEPENDENT, ADDITIVE EFFECTS ON REMARK 1 TITL 3 BOTH STRUCTURE AND STABILITY REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 1 REFERENCE 4 REMARK 1 AUTH U.H.SAUER,S.DAO-PIN,B.W.MATTHEWS REMARK 1 TITL TOLERANCE OF T4 LYSOZYME TO PROLINE SUBSTITUTIONS WITHIN THE REMARK 1 TITL 2 LONG INTERDOMAIN ALPHA-HELIX ILLUSTRATES THE ADAPTABILITY OF REMARK 1 TITL 3 PROTEINS TO POTENTIALLY DESTABILIZING LESIONS REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 1 REFERENCE 5 REMARK 1 AUTH D.W.HEINZ,W.A.BAASE,B.W.MATTHEWS REMARK 1 TITL TOLERANCE OF T4 LYSOZYME TO MULTIPLE XAA (RIGHT ARROW) ALA REMARK 1 TITL 2 SUBSTITUTIONS: A POLYALANINE ALPHA-HELIX CONTAINING TEN REMARK 1 TITL 3 CONSECUTIVE ALANINES REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 1 REFERENCE 6 REMARK 1 AUTH H.NICHOLSON,D.E.ANDERSON,S.DAO-PIN,B.W.MATTHEWS REMARK 1 TITL ANALYSIS OF THE INTERACTION BETWEEN CHARGED SIDE CHAINS AND REMARK 1 TITL 2 THE ALPHA-HELIX DIPOLE USING DESIGNED THERMOSTABLE MUTANTS REMARK 1 TITL 3 OF PHAGE T4 LYSOZYME REMARK 1 REF BIOCHEMISTRY V. 30 9816 1991 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 7 REMARK 1 AUTH S.DAO-PIN,U.SAUER,H.NICHOLSON,B.W.MATTHEWS REMARK 1 TITL CONTRIBUTIONS OF ENGINEERED SURFACE SALT BRIDGES TO THE REMARK 1 TITL 2 STABILITY OF T4 LYSOZYME DETERMINED BY DIRECTED MUTAGENESIS REMARK 1 REF BIOCHEMISTRY V. 30 7142 1991 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 8 REMARK 1 AUTH S.DAOPIN,T.ALBER,W.A.BAASE,J.A.WOZNIAK,B.W.MATTHEWS REMARK 1 TITL STRUCTURAL AND THERMODYNAMIC ANALYSIS OF THE PACKING OF TWO REMARK 1 TITL 2 ALPHA-HELICES IN BACTERIOPHAGE T4 LYSOZYME REMARK 1 REF J.MOL.BIOL. V. 221 647 1991 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 9 REMARK 1 AUTH X.-J.ZHANG,W.A.BAASE,B.W.MATTHEWS REMARK 1 TITL TOWARD A SIMPLIFICATION OF THE PROTEIN FOLDING PROBLEM: A REMARK 1 TITL 2 STABILIZING POLYALANINE ALPHA-HELIX ENGINEERED IN T4 REMARK 1 TITL 3 LYSOZYME REMARK 1 REF BIOCHEMISTRY V. 30 2012 1991 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 10 REMARK 1 AUTH P.E.PJURA,M.MATSUMURA,J.A.WOZNIAK,B.W.MATTHEWS REMARK 1 TITL STRUCTURE OF A THERMOSTABLE DISULFIDE-BRIDGE MUTANT OF PHAGE REMARK 1 TITL 2 T4 LYSOZYME SHOWS THAT AN ENGINEERED CROSSLINK IN A FLEXIBLE REMARK 1 TITL 3 REGION DOES NOT INCREASE THE RIGIDITY OF THE FOLDED PROTEIN REMARK 1 REF BIOCHEMISTRY V. 29 2592 1990 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 11 REMARK 1 AUTH M.MATSUMURA,J.A.WOZNIAK,S.DAO-PIN,B.W.MATTHEWS REMARK 1 TITL STRUCTURAL STUDIES OF MUTANTS OF T4 LYSOZYME THAT ALTER REMARK 1 TITL 2 HYDROPHOBIC STABILIZATION REMARK 1 REF J.BIOL.CHEM. V. 264 16059 1989 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 12 REMARK 1 AUTH L.H.WEAVER,T.M.GRAY,M.G.GRUETTER,D.E.ANDERSON,J.A.WOZNIAK, REMARK 1 AUTH 2 F.W.DAHLQUIST,B.W.MATTHEWS REMARK 1 TITL HIGH-RESOLUTION STRUCTURE OF THE TEMPERATURE-SENSITIVE REMARK 1 TITL 2 MUTANT OF PHAGE LYSOZYME, ARG 96 (RIGHT ARROW) HIS REMARK 1 REF BIOCHEMISTRY V. 28 3793 1989 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 13 REMARK 1 AUTH H.NICHOLSON,E.SODERLIND,D.E.TRONRUD,B.W.MATTHEWS REMARK 1 TITL CONTRIBUTIONS OF LEFT-HANDED HELICAL RESIDUES TO THE REMARK 1 TITL 2 STRUCTURE AND STABILITY OF BACTERIOPHAGE T4 LYSOZYME REMARK 1 REF J.MOL.BIOL. V. 210 181 1989 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 14 REMARK 1 AUTH M.MATSUMURA,W.J.BECKTEL,B.W.MATTHEWS REMARK 1 TITL HYDROPHOBIC STABILIZATION IN T4 LYSOZYME DETERMINED DIRECTLY REMARK 1 TITL 2 BY MULTIPLE SUBSTITUTIONS OF ILE 3 REMARK 1 REF NATURE V. 334 406 1988 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 15 REMARK 1 AUTH H.NICHOLSON,W.J.BECKTEL,B.W.MATTHEWS REMARK 1 TITL ENHANCED PROTEIN THERMOSTABILITY FROM DESIGNED MUTATIONS REMARK 1 TITL 2 THAT INTERACT WITH ALPHA-HELIX DIPOLES REMARK 1 REF NATURE V. 336 651 1988 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 16 REMARK 1 AUTH T.ALBER,J.A.BELL,S.DAO-PIN,H.NICHOLSON,J.A.WOZNIAK,S.COOK, REMARK 1 AUTH 2 B.W.MATTHEWS REMARK 1 TITL REPLACEMENTS OF PRO86 IN PHAGE T4 LYSOZYME EXTEND AN REMARK 1 TITL 2 ALPHA-HELIX BUT DO NOT ALTER PROTEIN STABILITY REMARK 1 REF SCIENCE V. 239 631 1988 REMARK 1 REFN ISSN 0036-8075 REMARK 1 REFERENCE 17 REMARK 1 AUTH B.W.MATTHEWS,H.NICHOLSON,W.J.BECKTEL REMARK 1 TITL ENHANCED PROTEIN THERMOSTABILITY FROM SITE-DIRECTED REMARK 1 TITL 2 MUTATIONS THAT DECREASE THE ENTROPY OF UNFOLDING REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 84 6663 1987 REMARK 1 REFN ISSN 0027-8424 REMARK 1 REFERENCE 18 REMARK 1 AUTH T.M.GRAY,B.W.MATTHEWS REMARK 1 TITL STRUCTURAL ANALYSIS OF THE TEMPERATURE-SENSITIVE MUTANT OF REMARK 1 TITL 2 BACTERIOPHAGE T4 LYSOZYME, GLYCINE 156 (RIGHT ARROW) REMARK 1 TITL 3 ASPARTIC ACID REMARK 1 REF J.BIOL.CHEM. V. 262 16858 1987 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 19 REMARK 1 AUTH T.ALBER,S.DAO-PIN,K.WILSON,J.A.WOZNIAK,S.P.COOK,B.W.MATTHEWS REMARK 1 TITL CONTRIBUTIONS OF HYDROGEN BONDS OF THR 157 TO THE REMARK 1 TITL 2 THERMODYNAMIC STABILITY OF PHAGE T4 LYSOZYME REMARK 1 REF NATURE V. 330 41 1987 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 20 REMARK 1 AUTH M.G.GRUETTER,T.M.GRAY,L.H.WEAVER,T.ALBER,K.WILSON, REMARK 1 AUTH 2 B.W.MATTHEWS REMARK 1 TITL STRUCTURAL STUDIES OF MUTANTS OF THE LYSOZYME OF REMARK 1 TITL 2 BACTERIOPHAGE T4. THE TEMPERATURE-SENSITIVE MUTANT PROTEIN REMARK 1 TITL 3 THR157 (RIGHT ARROW) ILE REMARK 1 REF J.MOL.BIOL. V. 197 315 1987 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 21 REMARK 1 AUTH L.H.WEAVER,B.W.MATTHEWS REMARK 1 TITL STRUCTURE OF BACTERIOPHAGE T4 LYSOZYME REFINED AT 1.7 REMARK 1 TITL 2 ANGSTROMS RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 193 189 1987 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 22 REMARK 1 AUTH T.ALBER,S.DAO-PIN,J.A.NYE,D.C.MUCHMORE,B.W.MATTHEWS REMARK 1 TITL TEMPERATURE-SENSITIVE MUTATIONS OF BACTERIOPHAGE T4 LYSOZYME REMARK 1 TITL 2 OCCUR AT SITES WITH LOW MOBILITY AND LOW SOLVENT REMARK 1 TITL 3 ACCESSIBILITY IN THE FOLDED PROTEIN REMARK 1 REF BIOCHEMISTRY V. 26 3754 1987 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 23 REMARK 1 AUTH B.W.MATTHEWS,M.G.GRUETTER,W.F.ANDERSON,S.J.REMINGTON REMARK 1 TITL COMMON PRECURSOR OF LYSOZYMES OF HEN EGG-WHITE AND REMARK 1 TITL 2 BACTERIOPHAGE T4 REMARK 1 REF NATURE V. 290 334 1981 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 24 REMARK 1 AUTH W.F.ANDERSON,M.G.GRUETTER,S.J.REMINGTON,L.H.WEAVER, REMARK 1 AUTH 2 B.W.MATTHEWS REMARK 1 TITL CRYSTALLOGRAPHIC DETERMINATION OF THE MODE OF BINDING OF REMARK 1 TITL 2 OLIGOSACCHARIDES TO T4 BACTERIOPHAGE LYSOZYME. IMPLICATIONS REMARK 1 TITL 3 FOR THE MECHANISM OF CATALYSIS REMARK 1 REF J.MOL.BIOL. V. 147 523 1981 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 25 REMARK 1 AUTH B.W.MATTHEWS,S.J.REMINGTON,M.G.GRUETTER,W.F.ANDERSON REMARK 1 TITL RELATION BETWEEN HEN EGG WHITE LYSOZYME AND BACTERIOPHAGE T4 REMARK 1 TITL 2 LYSOZYME. EVOLUTIONARY IMPLICATIONS REMARK 1 REF J.MOL.BIOL. V. 147 545 1981 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 26 REMARK 1 AUTH S.J.REMINGTON,W.F.ANDERSON,J.OWEN,L.F.TENEYCK,C.T.GRAINGER, REMARK 1 AUTH 2 B.W.MATTHEWS REMARK 1 TITL STRUCTURE OF THE LYSOZYME FROM BACTERIOPHAGE T4, AN ELECTRON REMARK 1 TITL 2 DENSITY MAP AT 2.4 ANGSTROMS RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 118 81 1978 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 27 REMARK 1 AUTH S.J.REMINGTON,L.F.TENEYCK,B.W.MATTHEWS REMARK 1 TITL ATOMIC COORDINATES FOR T4 PHAGE LYSOZYME REMARK 1 REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 75 265 1977 REMARK 1 REFN ISSN 0006-291X REMARK 1 REFERENCE 28 REMARK 1 AUTH B.W.MATTHEWS REMARK 1 TITL COMPARISON OF THE PREDICTED AND OBSERVED SECONDARY STRUCTURE REMARK 1 TITL 2 OF T4 PHAGE LYSOZYME REMARK 1 REF BIOCHIM.BIOPHYS.ACTA V. 405 442 1975 REMARK 1 REFN ISSN 0006-3002 REMARK 1 REFERENCE 29 REMARK 1 AUTH B.W.MATTHEWS,S.J.REMINGTON REMARK 1 TITL THE THREE DIMENSIONAL STRUCTURE OF THE LYSOZYME FROM REMARK 1 TITL 2 BACTERIOPHAGE T4 REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 71 4178 1974 REMARK 1 REFN ISSN 0027-8424 REMARK 1 REFERENCE 30 REMARK 1 AUTH B.W.MATTHEWS,F.W.DAHLQUIST,A.Y.MAYNARD REMARK 1 TITL CRYSTALLOGRAPHIC DATA FOR LYSOZYME FROM BACTERIOPHAGE T4 REMARK 1 REF J.MOL.BIOL. V. 78 575 1973 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1309 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 152 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.018 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.560 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 RESIDUES 162 - 164 IN WILD-TYPE AND ALL MUTANT LYSOZYMES REMARK 3 ARE EXTREMELY MOBILE. THUS THE COORDINATES FOR THESE REMARK 3 RESIDUES ARE VERY UNRELIABLE. REMARK 4 REMARK 4 1L43 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000174570. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.33333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.16667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 32.16667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 64.33333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 IN THIS MUTANT STRUCTURE THE SIDE CHAIN OF GLU 16 APPEARS REMARK 400 TO HAVE TWO DIFFERENT CONFORMATIONS. THE STRUCTURE WAS REMARK 400 REFINED WITH THE SIDE CHAIN IN THE TWO ALTERNATIVE REMARK 400 CONFORMATIONS. PROTEIN DATA BANK ENTRIES 1L42 AND 1L43 REMARK 400 CONTAIN COORDINATES CORRESPONDING TO THE TWO DIFFERENT REMARK 400 CONFORMATIONS OF GLU 16. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 16 CD GLU A 16 OE2 0.081 REMARK 500 GLU A 62 CD GLU A 62 OE2 0.068 REMARK 500 GLU A 64 CD GLU A 64 OE2 0.068 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 8 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 8 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP A 20 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 47 CB - CG - OD1 ANGL. DEV. = 8.5 DEGREES REMARK 500 ASP A 47 CB - CG - OD2 ANGL. DEV. = -9.5 DEGREES REMARK 500 ASP A 61 CB - CG - OD2 ANGL. DEV. = -7.2 DEGREES REMARK 500 ASP A 70 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP A 70 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP A 72 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG A 80 NE - CZ - NH1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG A 80 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 ASP A 92 CB - CG - OD1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ASP A 92 CB - CG - OD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 ARG A 125 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ASP A 127 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG A 154 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 154 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ASN A 163 N - CA - CB ANGL. DEV. = -18.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THERE ARE SEVERAL SUBTLE ASPECTS OF THE SECONDARY STRUCTURE REMARK 700 OF THIS MOLECULE WHICH CANNOT CONVENIENTLY BE REPRESENTED REMARK 700 IN THE HELIX AND SHEET RECORDS BELOW. THESE ASPECTS REMARK 700 INFLUENCE THE REPRESENTATION OF HELIX 6 AND STRAND 3 OF REMARK 700 SHEET *S1*. THE PAPER CITED AS REFERENCE 26 ABOVE SHOULD REMARK 700 BE CONSULTED FOR THESE SUBTLETIES. DBREF 1L43 A 1 164 UNP P00720 LYS_BPT4 1 164 SEQADV 1L43 GLU A 16 UNP P00720 LYS 16 ENGINEERED MUTATION SEQRES 1 A 164 MET ASN ILE PHE GLU MET LEU ARG ILE ASP GLU GLY LEU SEQRES 2 A 164 ARG LEU GLU ILE TYR LYS ASP THR GLU GLY TYR TYR THR SEQRES 3 A 164 ILE GLY ILE GLY HIS LEU LEU THR LYS SER PRO SER LEU SEQRES 4 A 164 ASN ALA ALA LYS SER GLU LEU ASP LYS ALA ILE GLY ARG SEQRES 5 A 164 ASN CYS ASN GLY VAL ILE THR LYS ASP GLU ALA GLU LYS SEQRES 6 A 164 LEU PHE ASN GLN ASP VAL ASP ALA ALA VAL ARG GLY ILE SEQRES 7 A 164 LEU ARG ASN ALA LYS LEU LYS PRO VAL TYR ASP SER LEU SEQRES 8 A 164 ASP ALA VAL ARG ARG CYS ALA LEU ILE ASN MET VAL PHE SEQRES 9 A 164 GLN MET GLY GLU THR GLY VAL ALA GLY PHE THR ASN SER SEQRES 10 A 164 LEU ARG MET LEU GLN GLN LYS ARG TRP ASP GLU ALA ALA SEQRES 11 A 164 VAL ASN LEU ALA LYS SER ARG TRP TYR ASN GLN THR PRO SEQRES 12 A 164 ASN ARG ALA LYS ARG VAL ILE THR THR PHE ARG THR GLY SEQRES 13 A 164 THR TRP ASP ALA TYR LYS ASN LEU FORMUL 2 HOH *152(H2 O) HELIX 1 H1 ILE A 3 GLU A 11 1 9 HELIX 2 H2 LEU A 39 ILE A 50 1 12 HELIX 3 H3 LYS A 60 ARG A 80 1 21 HELIX 4 H4 ALA A 82 SER A 90 1 9 HELIX 5 H5 ALA A 93 MET A 106 1 14 HELIX 6 H6 GLU A 108 GLY A 113 1 6 HELIX 7 H7 THR A 115 GLN A 123 1 9 HELIX 8 H8 TRP A 126 ALA A 134 1 9 HELIX 9 H9 ARG A 137 GLN A 141 1 5 HELIX 10 H10 PRO A 143 THR A 155 1 13 SHEET 1 S1 4 GLY A 56 ILE A 58 0 SHEET 2 S1 4 ARG A 14 ASP A 20 -1 O LEU A 15 N ILE A 58 SHEET 3 S1 4 TYR A 24 ILE A 27 -1 O TYR A 24 N ASP A 20 SHEET 4 S1 4 HIS A 31 LEU A 33 -1 N HIS A 31 O ILE A 27 CRYST1 61.100 61.100 96.500 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 0.866025 0.500000 0.000000 0.00000 ORIGX2 -0.500000 0.866025 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016367 0.009449 0.000000 0.00000 SCALE2 0.000000 0.018899 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010363 0.00000