PDB Short entry for 1M51
HEADER    LYASE                                   06-JUL-02   1M51              
TITLE     PEPCK COMPLEX WITH A GTP-COMPETITIVE INHIBITOR                        
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PHOSPHOENOLPYRUVATE CARBOXYKINASE, CYTOSOLIC;              
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: PHOSPHOENOLPYRUVATE CARBOXYLASE, PEPCK-C;                   
COMPND   5 EC: 4.1.1.32;                                                        
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: PCK1;                                                          
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    GLUCONEOGENESIS, XANTHINE, INHIBITOR, LYASE                           
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    L.H.FOLEY,P.WANG,P.DUNTEN,S.J.WERTHEIMER                              
REVDAT   3   14-FEB-24 1M51    1       REMARK SEQADV LINK                       
REVDAT   2   24-FEB-09 1M51    1       VERSN                                    
REVDAT   1   30-SEP-03 1M51    0                                                
JRNL        AUTH   L.H.FOLEY,P.WANG,P.DUNTEN,G.RAMSEY,M.-L.GUBLER,              
JRNL        AUTH 2 S.J.WERTHEIMER                                               
JRNL        TITL   X-RAY STRUCTURES OF TWO XANTHINE INHIBITORS BOUND TO PEPCK   
JRNL        TITL 2 AND N-3 MODIFICATIONS OF SUBSTITUTED 1,8-DIBENZYLXANTHINES   
JRNL        REF    BIOORG.MED.CHEM.LETT.         V.  13  3871 2003              
JRNL        REFN                   ISSN 0960-894X                               
JRNL        PMID   14552798                                                     
JRNL        DOI    10.1016/S0960-894X(03)00723-6                                
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   P.DUNTEN,C.BELUNIS,R.CROWTHER,K.HOLLFELDER,U.KAMMLOTT,       
REMARK   1  AUTH 2 W.LEVIN,H.MICHEL,G.B.RAMSEY,A.SWAIN,D.WEBER,S.J.WERTHEIMER   
REMARK   1  TITL   CRYSTAL STRUCTURE OF HUMAN CYTOSOLIC PHOSPHOENOLPYRUVATE     
REMARK   1  TITL 2 CARBOXYKINASE REVEALS A NEW GTP-BINDING SITE                 
REMARK   1  REF    J.MOL.BIOL.                   V. 316   257 2002              
REMARK   1  REFN                   ISSN 0022-2836                               
REMARK   1  DOI    10.1006/JMBI.2001.5364                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.25 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.1.24                                        
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 50.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 94.0                           
REMARK   3   NUMBER OF REFLECTIONS             : 25224                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.181                           
REMARK   3   R VALUE            (WORKING SET) : 0.178                           
REMARK   3   FREE R VALUE                     : 0.237                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1331                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.25                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.31                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 1694                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.1810                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 89                           
REMARK   3   BIN FREE R VALUE                    : 0.2690                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 4720                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 42                                      
REMARK   3   SOLVENT ATOMS            : 183                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 17.05                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -0.60000                                             
REMARK   3    B22 (A**2) : 0.43000                                              
REMARK   3    B33 (A**2) : -0.01000                                             
REMARK   3    B12 (A**2) : 0.37000                                              
REMARK   3    B13 (A**2) : -0.03000                                             
REMARK   3    B23 (A**2) : -0.53000                                             
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.396         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.396         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.153         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.998         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.937                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.896                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  4880 ; 0.012 ; 0.021       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  6602 ; 1.237 ; 1.960       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   600 ; 6.170 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   696 ; 0.081 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  3717 ; 0.005 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  2263 ; 0.196 ; 0.200       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):   281 ; 0.133 ; 0.200       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):    23 ; 0.198 ; 0.200       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):     8 ; 0.188 ; 0.200       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  3007 ; 0.585 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  4836 ; 1.130 ; 2.000       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  1873 ; 1.825 ; 3.000       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  1766 ; 3.007 ; 4.500       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : BABINET MODEL WITH MASK                              
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.40                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1M51 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUL-02.                  
REMARK 100 THE DEPOSITION ID IS D_1000016606.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 29-SEP-98                          
REMARK 200  TEMPERATURE           (KELVIN) : 110                                
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU                             
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.5418                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : MARRESEARCH                        
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : NULL                               
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 26567                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.250                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 30.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 94.1                               
REMARK 200  DATA REDUNDANCY                : 1.900                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.04400                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 29.6000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.33                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 88.2                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 1.70                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : 0.06000                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: RIGID-BODY REFINEMENT        
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 44.34                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION                          
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1                              
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A    -2                                                      
REMARK 465     GLU A    -1                                                      
REMARK 465     LEU A     0                                                      
REMARK 465     MET A     1                                                      
REMARK 465     PRO A     2                                                      
REMARK 465     PRO A     3                                                      
REMARK 465     GLN A     4                                                      
REMARK 465     LEU A     5                                                      
REMARK 465     GLN A     6                                                      
REMARK 465     ASN A     7                                                      
REMARK 465     GLY A     8                                                      
REMARK 465     LEU A     9                                                      
REMARK 465     PRO A   152                                                      
REMARK 465     LEU A   153                                                      
REMARK 465     THR A   465                                                      
REMARK 465     ALA A   466                                                      
REMARK 465     ALA A   467                                                      
REMARK 465     ALA A   468                                                      
REMARK 465     GLU A   469                                                      
REMARK 465     HIS A   470                                                      
REMARK 465     LYS A   471                                                      
REMARK 465     GLY A   472                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ASP A  84   CB  -  CG  -  OD2 ANGL. DEV. =   5.5 DEGREES          
REMARK 500    ASP A 365   CB  -  CG  -  OD2 ANGL. DEV. =   6.2 DEGREES          
REMARK 500    ASP A 591   CB  -  CG  -  OD2 ANGL. DEV. =   5.9 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ARG A 129      -55.51   -123.48                                   
REMARK 500    LEU A 149       97.46    -55.29                                   
REMARK 500    LYS A 243      -91.51    -80.87                                   
REMARK 500    LEU A 248      -65.91   -104.76                                   
REMARK 500    TRP A 260     -168.14   -122.21                                   
REMARK 500    PRO A 285     -179.01    -66.87                                   
REMARK 500    LYS A 290      -63.44    -29.81                                   
REMARK 500    ASP A 311      -55.36   -136.17                                   
REMARK 500    PHE A 333       77.91   -109.98                                   
REMARK 500    ASN A 344       73.82   -161.58                                   
REMARK 500    GLU A 397      130.69   -175.11                                   
REMARK 500    ASP A 478       73.38   -150.61                                   
REMARK 500    PHE A 480       11.69     57.67                                   
REMARK 500    PHE A 530     -125.44     47.82                                   
REMARK 500    ASN A 601     -120.50     57.76                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 701  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 LYS A 244   NZ                                                     
REMARK 620 2 HIS A 264   NE2  89.7                                              
REMARK 620 3 ASP A 311   OD1  87.0  82.4                                        
REMARK 620 4 HOH A1068   O    93.0  98.0 179.7                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 701                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1004                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TSX A 1001                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1002                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1003                
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1KHB   RELATED DB: PDB                                   
REMARK 900 PEPCK COMPLEX WITH A GTP ANALOG                                      
DBREF  1M51 A    1   622  UNP    P35558   PPCKC_HUMAN      1    622             
SEQADV 1M51 GLY A   -2  UNP  P35558              CLONING ARTIFACT               
SEQADV 1M51 GLU A   -1  UNP  P35558              CLONING ARTIFACT               
SEQADV 1M51 LEU A    0  UNP  P35558              CLONING ARTIFACT               
SEQADV 1M51 VAL A  267  UNP  P35558    ILE   267 VARIANT                        
SEQADV 1M51 ASP A  586  UNP  P35558    GLU   586 VARIANT                        
SEQADV 1M51 VAL A  597  UNP  P35558    GLU   597 VARIANT                        
SEQRES   1 A  625  GLY GLU LEU MET PRO PRO GLN LEU GLN ASN GLY LEU ASN          
SEQRES   2 A  625  LEU SER ALA LYS VAL VAL GLN GLY SER LEU ASP SER LEU          
SEQRES   3 A  625  PRO GLN ALA VAL ARG GLU PHE LEU GLU ASN ASN ALA GLU          
SEQRES   4 A  625  LEU CYS GLN PRO ASP HIS ILE HIS ILE CYS ASP GLY SER          
SEQRES   5 A  625  GLU GLU GLU ASN GLY ARG LEU LEU GLY GLN MET GLU GLU          
SEQRES   6 A  625  GLU GLY ILE LEU ARG ARG LEU LYS LYS TYR ASP ASN CYS          
SEQRES   7 A  625  TRP LEU ALA LEU THR ASP PRO ARG ASP VAL ALA ARG ILE          
SEQRES   8 A  625  GLU SER LYS THR VAL ILE VAL THR GLN GLU GLN ARG ASP          
SEQRES   9 A  625  THR VAL PRO ILE PRO LYS THR GLY LEU SER GLN LEU GLY          
SEQRES  10 A  625  ARG TRP MET SER GLU GLU ASP PHE GLU LYS ALA PHE ASN          
SEQRES  11 A  625  ALA ARG PHE PRO GLY CYS MET LYS GLY ARG THR MET TYR          
SEQRES  12 A  625  VAL ILE PRO PHE SER MET GLY PRO LEU GLY SER PRO LEU          
SEQRES  13 A  625  SER LYS ILE GLY ILE GLU LEU THR ASP SER PRO TYR VAL          
SEQRES  14 A  625  VAL ALA SER MET ARG ILE MET THR ARG MET GLY THR PRO          
SEQRES  15 A  625  VAL LEU GLU ALA LEU GLY ASP GLY GLU PHE VAL LYS CYS          
SEQRES  16 A  625  LEU HIS SER VAL GLY CYS PRO LEU PRO LEU GLN LYS PRO          
SEQRES  17 A  625  LEU VAL ASN ASN TRP PRO CYS ASN PRO GLU LEU THR LEU          
SEQRES  18 A  625  ILE ALA HIS LEU PRO ASP ARG ARG GLU ILE ILE SER PHE          
SEQRES  19 A  625  GLY SER GLY TYR GLY GLY ASN SER LEU LEU GLY LYS LYS          
SEQRES  20 A  625  CYS PHE ALA LEU ARG MET ALA SER ARG LEU ALA LYS GLU          
SEQRES  21 A  625  GLU GLY TRP LEU ALA GLU HIS MET LEU VAL LEU GLY ILE          
SEQRES  22 A  625  THR ASN PRO GLU GLY GLU LYS LYS TYR LEU ALA ALA ALA          
SEQRES  23 A  625  PHE PRO SER ALA CYS GLY LYS THR ASN LEU ALA MET MET          
SEQRES  24 A  625  ASN PRO SER LEU PRO GLY TRP LYS VAL GLU CYS VAL GLY          
SEQRES  25 A  625  ASP ASP ILE ALA TRP MET LYS PHE ASP ALA GLN GLY HIS          
SEQRES  26 A  625  LEU ARG ALA ILE ASN PRO GLU ASN GLY PHE PHE GLY VAL          
SEQRES  27 A  625  ALA PRO GLY THR SER VAL LYS THR ASN PRO ASN ALA ILE          
SEQRES  28 A  625  LYS THR ILE GLN LYS ASN THR ILE PHE THR ASN VAL ALA          
SEQRES  29 A  625  GLU THR SER ASP GLY GLY VAL TYR TRP GLU GLY ILE ASP          
SEQRES  30 A  625  GLU PRO LEU ALA SER GLY VAL THR ILE THR SER TRP LYS          
SEQRES  31 A  625  ASN LYS GLU TRP SER SER GLU ASP GLY GLU PRO CYS ALA          
SEQRES  32 A  625  HIS PRO ASN SER ARG PHE CYS THR PRO ALA SER GLN CYS          
SEQRES  33 A  625  PRO ILE ILE ASP ALA ALA TRP GLU SER PRO GLU GLY VAL          
SEQRES  34 A  625  PRO ILE GLU GLY ILE ILE PHE GLY GLY ARG ARG PRO ALA          
SEQRES  35 A  625  GLY VAL PRO LEU VAL TYR GLU ALA LEU SER TRP GLN HIS          
SEQRES  36 A  625  GLY VAL PHE VAL GLY ALA ALA MET ARG SER GLU ALA THR          
SEQRES  37 A  625  ALA ALA ALA GLU HIS LYS GLY LYS ILE ILE MET HIS ASP          
SEQRES  38 A  625  PRO PHE ALA MET ARG PRO PHE PHE GLY TYR ASN PHE GLY          
SEQRES  39 A  625  LYS TYR LEU ALA HIS TRP LEU SER MET ALA GLN HIS PRO          
SEQRES  40 A  625  ALA ALA LYS LEU PRO LYS ILE PHE HIS VAL ASN TRP PHE          
SEQRES  41 A  625  ARG LYS ASP LYS GLU GLY LYS PHE LEU TRP PRO GLY PHE          
SEQRES  42 A  625  GLY GLU ASN SER ARG VAL LEU GLU TRP MET PHE ASN ARG          
SEQRES  43 A  625  ILE ASP GLY LYS ALA SER THR LYS LEU THR PRO ILE GLY          
SEQRES  44 A  625  TYR ILE PRO LYS GLU ASP ALA LEU ASN LEU LYS GLY LEU          
SEQRES  45 A  625  GLY HIS ILE ASN MET MET GLU LEU PHE SER ILE SER LYS          
SEQRES  46 A  625  GLU PHE TRP ASP LYS GLU VAL GLU ASP ILE GLU LYS TYR          
SEQRES  47 A  625  LEU VAL ASP GLN VAL ASN ALA ASP LEU PRO CYS GLU ILE          
SEQRES  48 A  625  GLU ARG GLU ILE LEU ALA LEU LYS GLN ARG ILE SER GLN          
SEQRES  49 A  625  MET                                                          
HET     MN  A 701       1                                                       
HET    ACT  A1004       4                                                       
HET    TSX  A1001      29                                                       
HET    EDO  A1002       4                                                       
HET    EDO  A1003       4                                                       
HETNAM      MN MANGANESE (II) ION                                               
HETNAM     ACT ACETATE ION                                                      
HETNAM     TSX N-[4-(1-ALLYL-3-BUTYL-2,6-DIOXO-2,3,6,7-TETRAHYDRO-1H-           
HETNAM   2 TSX  PURIN-8-YLMETHYL)-PHENYL]-ACETAMIDE                             
HETNAM     EDO 1,2-ETHANEDIOL                                                   
HETSYN     TSX 1-ALLYL-3-BUTYL-8-(N-ACETYL-4-AMINOBENZYL)-XANTHINE              
HETSYN     EDO ETHYLENE GLYCOL                                                  
FORMUL   2   MN    MN 2+                                                        
FORMUL   3  ACT    C2 H3 O2 1-                                                  
FORMUL   4  TSX    C21 H25 N5 O3                                                
FORMUL   5  EDO    2(C2 H6 O2)                                                  
FORMUL   7  HOH   *183(H2 O)                                                    
HELIX    1   1 ASN A   10  ALA A   13  5                                   4    
HELIX    2   2 SER A   19  LEU A   23  5                                   5    
HELIX    3   3 PRO A   24  GLN A   39  1                                  16    
HELIX    4   4 SER A   49  GLU A   63  1                                  15    
HELIX    5   5 ILE A   88  SER A   90  5                                   3    
HELIX    6   6 GLU A   98  THR A  102  5                                   5    
HELIX    7   7 SER A  118  ALA A  128  1                                  11    
HELIX    8   8 SER A  163  THR A  174  1                                  12    
HELIX    9   9 GLY A  177  GLY A  185  1                                   9    
HELIX   10  10 ASN A  213  THR A  217  5                                   5    
HELIX   11  11 TYR A  235  LEU A  240  1                                   6    
HELIX   12  12 LEU A  248  GLY A  259  1                                  12    
HELIX   13  13 GLY A  289  MET A  295  1                                   7    
HELIX   14  14 ASN A  344  ILE A  351  1                                   8    
HELIX   15  15 SER A  411  CYS A  413  5                                   3    
HELIX   16  16 SER A  449  ALA A  459  1                                  11    
HELIX   17  17 PRO A  479  MET A  482  5                                   4    
HELIX   18  18 ASN A  489  MET A  500  1                                  12    
HELIX   19  19 ALA A  501  HIS A  503  5                                   3    
HELIX   20  20 GLY A  529  GLY A  531  5                                   3    
HELIX   21  21 GLU A  532  ASP A  545  1                                  14    
HELIX   22  22 ASN A  573  SER A  579  1                                   7    
HELIX   23  23 SER A  581  ASN A  601  1                                  21    
HELIX   24  24 ALA A  602  LEU A  604  5                                   3    
HELIX   25  25 PRO A  605  GLN A  621  1                                  17    
SHEET    1   A 9 TRP A 116  MET A 117  0                                        
SHEET    2   A 9 THR A  92  VAL A  95  1  N  ILE A  94   O  MET A 117           
SHEET    3   A 9 LEU A 218  LEU A 222  1  O  ILE A 219   N  VAL A  93           
SHEET    4   A 9 GLU A 227  PHE A 231 -1  O  ILE A 229   N  ALA A 220           
SHEET    5   A 9 VAL A 190  SER A 195  1  N  LEU A 193   O  ILE A 228           
SHEET    6   A 9 LYS A 155  THR A 161  1  N  LEU A 160   O  CYS A 192           
SHEET    7   A 9 THR A 138  MET A 146 -1  N  TYR A 140   O  THR A 161           
SHEET    8   A 9 HIS A  42  ILE A  45  1  N  HIS A  42   O  MET A 139           
SHEET    9   A 9 VAL A  15  GLN A  17  1  N  GLN A  17   O  ILE A  45           
SHEET    1   B 8 TRP A 116  MET A 117  0                                        
SHEET    2   B 8 THR A  92  VAL A  95  1  N  ILE A  94   O  MET A 117           
SHEET    3   B 8 LEU A 218  LEU A 222  1  O  ILE A 219   N  VAL A  93           
SHEET    4   B 8 GLU A 227  PHE A 231 -1  O  ILE A 229   N  ALA A 220           
SHEET    5   B 8 VAL A 190  SER A 195  1  N  LEU A 193   O  ILE A 228           
SHEET    6   B 8 LYS A 155  THR A 161  1  N  LEU A 160   O  CYS A 192           
SHEET    7   B 8 THR A 138  MET A 146 -1  N  TYR A 140   O  THR A 161           
SHEET    8   B 8 ARG A 175  MET A 176 -1  O  ARG A 175   N  SER A 145           
SHEET    1   C 5 LEU A  66  LEU A  69  0                                        
SHEET    2   C 5 CYS A  75  ALA A  78 -1  O  CYS A  75   N  LEU A  69           
SHEET    3   C 5 ILE A 356  THR A 358  1  O  PHE A 357   N  ALA A  78           
SHEET    4   C 5 ARG A 405  PRO A 409 -1  O  ARG A 405   N  THR A 358           
SHEET    5   C 5 GLY A 331  VAL A 335 -1  N  PHE A 332   O  THR A 408           
SHEET    1   D 7 LYS A 304  GLY A 309  0                                        
SHEET    2   D 7 LEU A 266  THR A 271 -1  N  GLY A 269   O  GLU A 306           
SHEET    3   D 7 LYS A 277  ALA A 283 -1  O  LYS A 278   N  ILE A 270           
SHEET    4   D 7 VAL A 426  GLY A 434  1  O  ILE A 432   N  ALA A 281           
SHEET    5   D 7 LEU A 323  ILE A 326 -1  N  ALA A 325   O  VAL A 426           
SHEET    6   D 7 ALA A 313  PHE A 317 -1  N  TRP A 314   O  ILE A 326           
SHEET    7   D 7 LEU A 261  GLU A 263 -1  N  LEU A 261   O  MET A 315           
SHEET    1   E 6 LYS A 304  GLY A 309  0                                        
SHEET    2   E 6 LEU A 266  THR A 271 -1  N  GLY A 269   O  GLU A 306           
SHEET    3   E 6 LYS A 277  ALA A 283 -1  O  LYS A 278   N  ILE A 270           
SHEET    4   E 6 VAL A 426  GLY A 434  1  O  ILE A 432   N  ALA A 281           
SHEET    5   E 6 LYS A 510  VAL A 514  1  O  LYS A 510   N  ILE A 431           
SHEET    6   E 6 VAL A 444  GLU A 446 -1  N  TYR A 445   O  HIS A 513           
SHEET    1   F 4 VAL A 368  TYR A 369  0                                        
SHEET    2   F 4 ALA A 361  THR A 363 -1  N  ALA A 361   O  TYR A 369           
SHEET    3   F 4 ILE A 383  THR A 384 -1  O  THR A 384   N  GLU A 362           
SHEET    4   F 4 GLU A 390  TRP A 391 -1  O  TRP A 391   N  ILE A 383           
SHEET    1   G 2 ARG A 461  GLU A 463  0                                        
SHEET    2   G 2 ILE A 475  HIS A 477 -1  O  MET A 476   N  SER A 462           
SHEET    1   H 2 THR A 550  THR A 553  0                                        
SHEET    2   H 2 GLY A 556  PRO A 559 -1  O  ILE A 558   N  LYS A 551           
LINK         NZ  LYS A 244                MN    MN A 701     1555   1555  1.95  
LINK         NE2 HIS A 264                MN    MN A 701     1555   1555  2.21  
LINK         OD1 ASP A 311                MN    MN A 701     1555   1555  2.32  
LINK        MN    MN A 701                 O   HOH A1068     1555   1555  2.25  
CISPEP   1 LEU A  200    PRO A  201          0         6.85                     
SITE     1 AC1  4 LYS A 244  HIS A 264  ASP A 311  HOH A1068                    
SITE     1 AC2  5 ARG A  87  TYR A 235  LYS A 244  HOH A1068                    
SITE     2 AC2  5 HOH A1098                                                     
SITE     1 AC3 14 GLY A 289  ASN A 292  LEU A 293  ARG A 436                    
SITE     2 AC3 14 TRP A 516  PHE A 517  PHE A 525  TRP A 527                    
SITE     3 AC3 14 PRO A 528  GLY A 529  PHE A 530  ASN A 533                    
SITE     4 AC3 14 HOH A1023  HOH A1105                                          
SITE     1 AC4  8 ALA A 447  SER A 449  TRP A 450  PRO A 509                    
SITE     2 AC4  8 LYS A 510  ILE A 511  HOH A1173  HOH A1174                    
SITE     1 AC5  5 TYR A  72  GLN A 352  ILE A 373  GLU A 375                    
SITE     2 AC5  5 HOH A1063                                                     
CRYST1   45.407   61.067   62.007  88.91  70.21  72.62 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.022023 -0.006892 -0.008591        0.00000                         
SCALE2      0.000000  0.017159  0.001574        0.00000                         
SCALE3      0.000000  0.000000  0.017212        0.00000