PDB Short entry for 1M91 HEADER OXIDOREDUCTASE 26-JUL-02 1M91 TITLE A THEORETICAL MODEL OF NADH-CYTOCHROME B5 REDUCTASE (HUMAN) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NADH-CYTOCHROME B5 REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.6.2.2 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN KEYWDS OXIDOREDUCTASE, FLAVOPROTEIN, FAD, NAD, MEMBRANE, MYRISTATE, KEYWDS 2 LIPOPROTEIN, ENDOPLASMIC RETICULUM, DISEASE MUTATIO, KEYWDS 3 POLYMORPHISM EXPDTA THEORETICAL MODEL AUTHOR R.RAVULAPALLI,S.MURUGANANTHAM REVDAT 1 14-AUG-02 1M91 0 JRNL AUTH R.RAVULAPALLI,S.MURUGANANTHAM JRNL TITL A THEORETICAL MODEL OF NADH-CYTOCHROME B5 JRNL TITL 2 REDUCTASE (HUMAN) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : MODELER 2000 REMARK 3 AUTHORS : ANDREJ SALI ET AL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1M91 COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JUL-2002. REMARK 100 THE RCSB ID CODE IS RCSB016747. REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: REFINED USING INSIGHT II MODELER REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 11 C - N - CA ANGL. DEV. = 22.4 DEGREES REMARK 500 LEU A 12 N - CA - C ANGL. DEV. =-19.9 DEGREES REMARK 500 LEU A 12 C - N - CA ANGL. DEV. = 21.8 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 11 66.36 114.26 REMARK 500 ILE A 109 128.41 68.91 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NDH RELATED DB: PDB REMARK 900 1NDH CONTAINS NADH-CYTOCHROME B5 REDUCTASE FROM PIG LIVER REMARK 900 AT 2.4 A RESOLUTION REMARK 900 RELATED ID: 1I7P RELATED DB: PDB REMARK 900 1I7P CONTAINS RAT B5R IN COMPLEX WITH FAD DBREF 1M91 A 1 300 UNP P00387 NC5R_HUMAN 1 300 SEQRES 1 A 300 GLY ALA GLN LEU SER THR LEU GLY HIS MET VAL LEU PHE SEQRES 2 A 300 PRO VAL TRP PHE LEU TYR SER LEU LEU MET LYS LEU PHE SEQRES 3 A 300 GLN ARG SER THR PRO ALA ILE THR LEU GLU SER PRO ASP SEQRES 4 A 300 ILE LYS TYR PRO LEU ARG LEU ILE ASP ARG GLU ILE ILE SEQRES 5 A 300 SER HIS ASP THR ARG ARG PHE ARG PHE ALA LEU PRO SER SEQRES 6 A 300 PRO GLN HIS ILE LEU GLY LEU PRO VAL GLY GLN HIS ILE SEQRES 7 A 300 TYR LEU SER ALA ARG ILE ASP GLY ASN LEU VAL VAL ARG SEQRES 8 A 300 PRO TYR THR PRO ILE SER SER ASP ASP ASP LYS GLY PHE SEQRES 9 A 300 VAL ASP LEU VAL ILE LYS VAL TYR PHE LYS ASP THR HIS SEQRES 10 A 300 PRO LYS PHE PRO ALA GLY GLY LYS MET SER GLN TYR LEU SEQRES 11 A 300 GLU SER MET GLN ILE GLY ASP THR ILE GLU PHE ARG GLY SEQRES 12 A 300 PRO SER GLY LEU LEU VAL TYR GLN GLY LYS GLY LYS PHE SEQRES 13 A 300 ALA ILE ARG PRO ASP LYS LYS SER ASN PRO ILE ILE ARG SEQRES 14 A 300 THR VAL LYS SER VAL GLY MET ILE ALA GLY GLY THR GLY SEQRES 15 A 300 ILE THR PRO MET LEU GLN VAL ILE ARG ALA ILE MET LYS SEQRES 16 A 300 ASP PRO ASP ASP HIS THR VAL CYS HIS LEU LEU PHE ALA SEQRES 17 A 300 ASN GLN THR GLU LYS ASP ILE LEU LEU ARG PRO GLU LEU SEQRES 18 A 300 GLU GLU LEU ARG ASN LYS HIS SER ALA ARG PHE LYS LEU SEQRES 19 A 300 TRP TYR THR LEU ASP ARG ALA PRO GLU ALA TRP ASP TYR SEQRES 20 A 300 GLY GLN GLY PHE VAL ASN GLU GLU MET ILE ARG ASP HIS SEQRES 21 A 300 LEU PRO PRO PRO GLU GLU GLU PRO LEU VAL LEU MET CYS SEQRES 22 A 300 GLY PRO PRO PRO MET ILE GLN TYR ALA CYS LEU PRO ASN SEQRES 23 A 300 LEU ASP HIS VAL GLY HIS PRO THR GLU ARG CYS PHE VAL SEQRES 24 A 300 PHE HELIX 1 1 GLY A 124 MET A 133 1 10 HELIX 2 2 GLY A 182 ASP A 196 1 15 HELIX 3 3 THR A 211 ILE A 215 5 5 HELIX 4 4 ARG A 218 LEU A 221 5 4 HELIX 5 5 GLU A 222 SER A 229 1 8 HELIX 6 6 ASN A 253 LEU A 261 1 9 HELIX 7 7 PRO A 275 ALA A 282 1 8 HELIX 8 8 ALA A 282 GLY A 291 1 10 HELIX 9 9 PRO A 293 GLU A 295 5 3 SHEET 1 A 6 ASN A 87 TYR A 93 0 SHEET 2 A 6 HIS A 77 ILE A 84 -1 N ILE A 84 O ASN A 87 SHEET 3 A 6 THR A 138 SER A 145 -1 O SER A 145 N HIS A 77 SHEET 4 A 6 TYR A 42 ILE A 51 -1 N TYR A 42 O PHE A 141 SHEET 5 A 6 ARG A 57 ALA A 62 -1 O ARG A 60 N ASP A 48 SHEET 6 A 6 PHE A 104 VAL A 108 -1 O LEU A 107 N PHE A 59 SHEET 1 B 3 LEU A 148 GLY A 152 0 SHEET 2 B 3 LYS A 155 ILE A 158 -1 O ALA A 157 N VAL A 149 SHEET 3 B 3 ILE A 167 THR A 170 -1 O ILE A 167 N ILE A 158 SHEET 1 C 6 GLY A 248 GLN A 249 0 SHEET 2 C 6 PHE A 232 LEU A 238 1 N LEU A 238 O GLY A 248 SHEET 3 C 6 VAL A 202 ASN A 209 1 N LEU A 205 O LYS A 233 SHEET 4 C 6 SER A 173 GLY A 179 1 N ALA A 178 O ALA A 208 SHEET 5 C 6 PRO A 268 CYS A 273 1 O LEU A 271 N ILE A 177 SHEET 6 C 6 CYS A 297 VAL A 299 1 O PHE A 298 N VAL A 270 CISPEP 1 GLY A 143 PRO A 144 0 -3.04 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000