PDB Short entry for 1MM8
HEADER    TRANSCRIPTION/DNA                       03-SEP-02   1MM8              
TITLE     CRYSTAL STRUCTURE OF TN5 TRANSPOSASE COMPLEXED WITH ME DNA            
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: ME DNA TRANSFERRED STRAND;                                 
COMPND   3 CHAIN: B;                                                            
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 MOL_ID: 2;                                                           
COMPND   6 MOLECULE: ME DNA NON-TRANSFERRED STRAND;                             
COMPND   7 CHAIN: C;                                                            
COMPND   8 ENGINEERED: YES;                                                     
COMPND   9 MOL_ID: 3;                                                           
COMPND  10 MOLECULE: TN5 TRANSPOSASE;                                           
COMPND  11 CHAIN: A;                                                            
COMPND  12 ENGINEERED: YES;                                                     
COMPND  13 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES;                                                      
SOURCE   3 OTHER_DETAILS: DNA SYNTHESIZED BY IDT;                               
SOURCE   4 MOL_ID: 2;                                                           
SOURCE   5 SYNTHETIC: YES;                                                      
SOURCE   6 OTHER_DETAILS: DNA SYNTHESIZED BY IDT;                               
SOURCE   7 MOL_ID: 3;                                                           
SOURCE   8 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;                               
SOURCE   9 ORGANISM_TAXID: 562;                                                 
SOURCE  10 GENE: TN5 TRANSPOSASES;                                              
SOURCE  11 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  12 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE  13 EXPRESSION_SYSTEM_STRAIN: ER2566;                                    
SOURCE  14 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  15 EXPRESSION_SYSTEM_PLASMID: PTYB4                                     
KEYWDS    PROTEIN-DNA COMPLEX, TRANSCRIPTION-DNA COMPLEX                        
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    M.STEINIGER-WHITE,A.BHASIN,S.LOVELL,I.RAYMENT,W.S.REZNIKOFF           
REVDAT   3   27-OCT-21 1MM8    1       REMARK DBREF  SEQADV LINK                
REVDAT   2   24-FEB-09 1MM8    1       VERSN                                    
REVDAT   1   13-DEC-02 1MM8    0                                                
JRNL        AUTH   M.STEINIGER-WHITE,A.BHASIN,S.LOVELL,I.RAYMENT,W.S.REZNIKOFF  
JRNL        TITL   EVIDENCE FOR "UNSEEN" TRANSPOSASE--DNA CONTACTS              
JRNL        REF    J.MOL.BIOL.                   V. 322   971 2002              
JRNL        REFN                   ISSN 0022-2836                               
JRNL        PMID   12367522                                                     
JRNL        DOI    10.1016/S0022-2836(02)00877-X                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.80 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS                                                  
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : ENGH & HUBER                                    
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 500.00                         
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : NULL                           
REMARK   3   NUMBER OF REFLECTIONS             : 22984                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : NULL                            
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.217                           
REMARK   3   FREE R VALUE                     : 0.271                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : 1034                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : NULL                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : NULL                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : NULL                         
REMARK   3   BIN FREE R VALUE                    : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : NULL                         
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 3563                                    
REMARK   3   NUCLEIC ACID ATOMS       : 814                                     
REMARK   3   HETEROGEN ATOMS          : 2                                       
REMARK   3   SOLVENT ATOMS            : 254                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : NULL                            
REMARK   3   ESD FROM SIGMAA              (A) : NULL                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : NULL                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : NULL                            
REMARK   3   BOND ANGLES            (DEGREES) : NULL                            
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : NULL                            
REMARK   3   IMPROPER ANGLES        (DEGREES) : NULL                            
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : ISOTROPIC                                 
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   KSOL        : NULL                                                 
REMARK   3   BSOL        : NULL                                                 
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1MM8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-SEP-02.                  
REMARK 100 THE DEPOSITION ID IS D_1000017014.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 22-MAR-01                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 8.                                 
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 19-ID                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.96486                            
REMARK 200  MONOCHROMATOR                  : SI                                 
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : CUSTOM-MADE                        
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 22984                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.800                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 500.000                            
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 90.0                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : 0.14500                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.80                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 50.0                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: EPMR                                                  
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 61.60                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.20                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 1500, 300 MM NA TARTRATE, 50     
REMARK 280  MM HEPES, 5 MM MNCL2, PH 8., VAPOR DIFFUSION, HANGING DROP,         
REMARK 280  TEMPERATURE 293K                                                    
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+2/3                                            
REMARK 290       3555   -X+Y,-X,Z+1/3                                           
REMARK 290       4555   -X,-Y,Z+1/2                                             
REMARK 290       5555   Y,-X+Y,Z+1/6                                            
REMARK 290       6555   X-Y,X,Z+5/6                                             
REMARK 290       7555   Y,X,-Z+2/3                                              
REMARK 290       8555   X-Y,-Y,-Z                                               
REMARK 290       9555   -X,-X+Y,-Z+1/3                                          
REMARK 290      10555   -Y,-X,-Z+1/6                                            
REMARK 290      11555   -X+Y,Y,-Z+1/2                                           
REMARK 290      12555   X,X-Y,-Z+5/6                                            
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000      155.66667            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       77.83333            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000      116.75000            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       38.91667            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000      194.58333            
REMARK 290   SMTRY1   7 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   7  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000      155.66667            
REMARK 290   SMTRY1   8  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   8  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   9 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   9 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   9  0.000000  0.000000 -1.000000       77.83333            
REMARK 290   SMTRY1  10  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2  10 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3  10  0.000000  0.000000 -1.000000       38.91667            
REMARK 290   SMTRY1  11 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2  11  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3  11  0.000000  0.000000 -1.000000      116.75000            
REMARK 290   SMTRY1  12  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2  12  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3  12  0.000000  0.000000 -1.000000      194.58333            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, A                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2  0.500000  0.866025  0.000000      -56.25000            
REMARK 350   BIOMT2   2  0.866025 -0.500000  0.000000       97.42786            
REMARK 350   BIOMT3   2  0.000000  0.000000 -1.000000      428.08333            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A    -3                                                      
REMARK 465     VAL A    -2                                                      
REMARK 465     THR A    -1                                                      
REMARK 465     PHE A     0                                                      
REMARK 465     MET A     1                                                      
REMARK 465     ILE A     2                                                      
REMARK 465     THR A     3                                                      
REMARK 465     SER A     4                                                      
REMARK 465     PRO A   373                                                      
REMARK 465     GLN A   374                                                      
REMARK 465     ALA A   375                                                      
REMARK 465     LEU A   376                                                      
REMARK 465     ARG A   377                                                      
REMARK 465     ALA A   378                                                      
REMARK 465     GLN A   379                                                      
REMARK 465     GLY A   380                                                      
REMARK 465     LEU A   381                                                      
REMARK 465     LEU A   382                                                      
REMARK 465     LYS A   383                                                      
REMARK 465     GLU A   384                                                      
REMARK 465     ALA A   385                                                      
REMARK 465     GLU A   386                                                      
REMARK 465     HIS A   387                                                      
REMARK 465     VAL A   388                                                      
REMARK 465     GLU A   389                                                      
REMARK 465     SER A   390                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     LYS A 120    CG   CD   CE   NZ                                   
REMARK 470     ASP A 158    CG   OD1  OD2                                       
REMARK 470     LYS A 249    CG   CD   CE   NZ                                   
REMARK 470     LYS A 273    CG   CD   CE   NZ                                   
REMARK 470     GLU A 394    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 418    CG   CD   CE   NZ                                   
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   NH1  ARG A   324     O    HOH A   747              2.00            
REMARK 500   OG   SER A    53     O    HOH A   755              2.07            
REMARK 500   O    VAL A   359     O    HOH A   736              2.17            
REMARK 500   OP1   DG B   116     O    HOH B   614              2.17            
REMARK 500   O    LEU A   422     O    HOH A   729              2.17            
REMARK 500   OG   SER A    19     O    HOH A   752              2.18            
REMARK 500   N    LEU A   363     O    HOH A   736              2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   O5'   DT C   209     O    HOH A   754    12566     2.10            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DC C 205   O4' -  C1' -  N1  ANGL. DEV. =   2.2 DEGREES          
REMARK 500    PRO A  67   C   -  N   -  CA  ANGL. DEV. =   9.1 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    LEU A   6      -94.65    -80.26                                   
REMARK 500    HIS A   7       53.44    -68.75                                   
REMARK 500    ALA A   9      -56.15    -28.89                                   
REMARK 500    TYR A  41       53.18   -113.22                                   
REMARK 500    PRO A  67       -1.73    -53.31                                   
REMARK 500    GLN A  87       -3.59    -53.38                                   
REMARK 500    GLN A 106      -46.14    -22.98                                   
REMARK 500    THR A 135      -75.23    -87.56                                   
REMARK 500    SER A 178       -3.34    -58.81                                   
REMARK 500    GLU A 190       -9.53    -52.56                                   
REMARK 500    ASP A 192       75.41    -62.78                                   
REMARK 500    LYS A 212      -60.84   -123.72                                   
REMARK 500    GLU A 219      -71.56    -72.51                                   
REMARK 500    LYS A 252     -138.33    -75.70                                   
REMARK 500    ARG A 259      140.87   -174.22                                   
REMARK 500    GLU A 286      172.35    -47.44                                   
REMARK 500    VAL A 306       16.55   -144.26                                   
REMARK 500    LYS A 333      -92.21    -94.54                                   
REMARK 500    LYS A 412       -9.00   -149.50                                   
REMARK 500    LYS A 418     -174.47    -56.98                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500     DA B 119         0.07    SIDE CHAIN                              
REMARK 500     DC C 205         0.07    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 500  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1  DG B 120   O3'                                                    
REMARK 620 2 ASP A  97   OD2 138.0                                              
REMARK 620 3 GLU A 326   OE1  62.5  77.2                                        
REMARK 620 4 HOH A 714   O    93.7  71.7  87.1                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 501  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A  97   OD1                                                    
REMARK 620 2 ASP A 188   OD2  75.9                                              
REMARK 620 N                    1                                               
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 500                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 501                  
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1F3I   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF TN5 TRANSPOSASE COMPLEXED WITH TRANSPOSON END   
REMARK 900 DNA                                                                  
REMARK 900 RELATED ID: 1L1A   RELATED DB: PDB                                   
REMARK 900 TN5 TRANSPOSASE: 20MER OUTSIDE END 2 MN COMPLEX                      
DBREF  1MM8 A   -3   476  UNP    Q46731   Q46731_ECOLI     1    480             
DBREF  1MM8 B  101   120  PDB    1MM8     1MM8           101    120             
DBREF  1MM8 C  201   220  PDB    1MM8     1MM8           201    220             
SEQADV 1MM8 LYS A   54  UNP  Q46731    GLU    58 ENGINEERED MUTATION            
SEQADV 1MM8 ALA A   56  UNP  Q46731    MET    60 ENGINEERED MUTATION            
SEQADV 1MM8 LYS A  345  UNP  Q46731    GLU   349 ENGINEERED MUTATION            
SEQADV 1MM8 PRO A  372  UNP  Q46731    LEU   376 ENGINEERED MUTATION            
SEQADV 1MM8 GLY A  477  UNP  Q46731              CLONING ARTIFACT               
SEQRES   1 B   20   DG  DA  DG  DA  DT  DG  DT  DG  DT  DA  DT  DA  DA          
SEQRES   2 B   20   DG  DA  DG  DA  DC  DA  DG                                  
SEQRES   1 C   20   DC  DT  DG  DT  DC  DT  DC  DT  DT  DA  DT  DA  DC          
SEQRES   2 C   20   DA  DC  DA  DT  DC  DT  DC                                  
SEQRES   1 A  481  MET VAL THR PHE MET ILE THR SER ALA LEU HIS ARG ALA          
SEQRES   2 A  481  ALA ASP TRP ALA LYS SER VAL PHE SER SER ALA ALA LEU          
SEQRES   3 A  481  GLY ASP PRO ARG ARG THR ALA ARG LEU VAL ASN VAL ALA          
SEQRES   4 A  481  ALA GLN LEU ALA LYS TYR SER GLY LYS SER ILE THR ILE          
SEQRES   5 A  481  SER SER GLU GLY SER LYS ALA ALA GLN GLU GLY ALA TYR          
SEQRES   6 A  481  ARG PHE ILE ARG ASN PRO ASN VAL SER ALA GLU ALA ILE          
SEQRES   7 A  481  ARG LYS ALA GLY ALA MET GLN THR VAL LYS LEU ALA GLN          
SEQRES   8 A  481  GLU PHE PRO GLU LEU LEU ALA ILE GLU ASP THR THR SER          
SEQRES   9 A  481  LEU SER TYR ARG HIS GLN VAL ALA GLU GLU LEU GLY LYS          
SEQRES  10 A  481  LEU GLY SER ILE GLN ASP LYS SER ARG GLY TRP TRP VAL          
SEQRES  11 A  481  HIS SER VAL LEU LEU LEU GLU ALA THR THR PHE ARG THR          
SEQRES  12 A  481  VAL GLY LEU LEU HIS GLN GLU TRP TRP MET ARG PRO ASP          
SEQRES  13 A  481  ASP PRO ALA ASP ALA ASP GLU LYS GLU SER GLY LYS TRP          
SEQRES  14 A  481  LEU ALA ALA ALA ALA THR SER ARG LEU ARG MET GLY SER          
SEQRES  15 A  481  MET MET SER ASN VAL ILE ALA VAL CYS ASP ARG GLU ALA          
SEQRES  16 A  481  ASP ILE HIS ALA TYR LEU GLN ASP LYS LEU ALA HIS ASN          
SEQRES  17 A  481  GLU ARG PHE VAL VAL ARG SER LYS HIS PRO ARG LYS ASP          
SEQRES  18 A  481  VAL GLU SER GLY LEU TYR LEU TYR ASP HIS LEU LYS ASN          
SEQRES  19 A  481  GLN PRO GLU LEU GLY GLY TYR GLN ILE SER ILE PRO GLN          
SEQRES  20 A  481  LYS GLY VAL VAL ASP LYS ARG GLY LYS ARG LYS ASN ARG          
SEQRES  21 A  481  PRO ALA ARG LYS ALA SER LEU SER LEU ARG SER GLY ARG          
SEQRES  22 A  481  ILE THR LEU LYS GLN GLY ASN ILE THR LEU ASN ALA VAL          
SEQRES  23 A  481  LEU ALA GLU GLU ILE ASN PRO PRO LYS GLY GLU THR PRO          
SEQRES  24 A  481  LEU LYS TRP LEU LEU LEU THR SER GLU PRO VAL GLU SER          
SEQRES  25 A  481  LEU ALA GLN ALA LEU ARG VAL ILE ASP ILE TYR THR HIS          
SEQRES  26 A  481  ARG TRP ARG ILE GLU GLU PHE HIS LYS ALA TRP LYS THR          
SEQRES  27 A  481  GLY ALA GLY ALA GLU ARG GLN ARG MET GLU LYS PRO ASP          
SEQRES  28 A  481  ASN LEU GLU ARG MET VAL SER ILE LEU SER PHE VAL ALA          
SEQRES  29 A  481  VAL ARG LEU LEU GLN LEU ARG GLU SER PHE THR PRO PRO          
SEQRES  30 A  481  GLN ALA LEU ARG ALA GLN GLY LEU LEU LYS GLU ALA GLU          
SEQRES  31 A  481  HIS VAL GLU SER GLN SER ALA GLU THR VAL LEU THR PRO          
SEQRES  32 A  481  ASP GLU CYS GLN LEU LEU GLY TYR LEU ASP LYS GLY LYS          
SEQRES  33 A  481  ARG LYS ARG LYS GLU LYS ALA GLY SER LEU GLN TRP ALA          
SEQRES  34 A  481  TYR MET ALA ILE ALA ARG LEU GLY GLY PHE MET ASP SER          
SEQRES  35 A  481  LYS ARG THR GLY ILE ALA SER TRP GLY ALA LEU TRP GLU          
SEQRES  36 A  481  GLY TRP GLU ALA LEU GLN SER LYS LEU ASP GLY PHE LEU          
SEQRES  37 A  481  ALA ALA LYS ASP LEU MET ALA GLN GLY ILE LYS ILE GLY          
HET     MN  A 500       1                                                       
HET     MN  A 501       1                                                       
HETNAM      MN MANGANESE (II) ION                                               
FORMUL   4   MN    2(MN 2+)                                                     
FORMUL   6  HOH   *254(H2 O)                                                    
HELIX    1   1 HIS A    7  SER A   18  1                                  12    
HELIX    2   2 ASP A   24  TYR A   41  1                                  18    
HELIX    3   3 SER A   45  SER A   50  1                                   6    
HELIX    4   4 SER A   53  ASN A   66  1                                  14    
HELIX    5   5 SER A   70  GLN A   87  1                                  18    
HELIX    6   6 HIS A  105  LEU A  111  5                                   7    
HELIX    7   7 ASP A  153  ALA A  157  5                                   5    
HELIX    8   8 LYS A  160  SER A  162  5                                   3    
HELIX    9   9 GLY A  163  GLY A  177  1                                  15    
HELIX   10  10 SER A  178  SER A  181  5                                   4    
HELIX   11  11 ASP A  188  ASP A  192  5                                   5    
HELIX   12  12 ILE A  193  HIS A  203  1                                  11    
HELIX   13  13 TYR A  223  LYS A  229  1                                   7    
HELIX   14  14 LYS A  273  ASN A  276  5                                   4    
HELIX   15  15 SER A  308  HIS A  321  1                                  14    
HELIX   16  16 TRP A  323  LYS A  333  1                                  11    
HELIX   17  17 GLY A  337  GLN A  341  5                                   5    
HELIX   18  18 LYS A  345  PHE A  370  1                                  26    
HELIX   19  19 SER A  392  VAL A  396  5                                   5    
HELIX   20  20 THR A  398  ASP A  409  1                                  12    
HELIX   21  21 GLN A  423  GLY A  434  1                                  12    
HELIX   22  22 SER A  445  ALA A  471  1                                  27    
SHEET    1   A 9 GLY A 235  ILE A 241  0                                        
SHEET    2   A 9 ARG A 259  THR A 271 -1  O  ALA A 261   N  ILE A 239           
SHEET    3   A 9 THR A 278  ILE A 287 -1  O  LEU A 279   N  ILE A 270           
SHEET    4   A 9 LYS A 297  THR A 302 -1  O  TRP A 298   N  ALA A 284           
SHEET    5   A 9 ARG A 206  ARG A 210 -1  N  VAL A 209   O  LEU A 301           
SHEET    6   A 9 VAL A 183  CYS A 187  1  N  ALA A 185   O  VAL A 208           
SHEET    7   A 9 LEU A  92  TYR A 103  1  N  ALA A  94   O  ILE A 184           
SHEET    8   A 9 ARG A 122  GLU A 133 -1  O  ARG A 122   N  TYR A 103           
SHEET    9   A 9 GLY A 112  LYS A 113 -1  N  GLY A 112   O  GLY A 123           
SHEET    1   B 9 GLY A 235  ILE A 241  0                                        
SHEET    2   B 9 ARG A 259  THR A 271 -1  O  ALA A 261   N  ILE A 239           
SHEET    3   B 9 THR A 278  ILE A 287 -1  O  LEU A 279   N  ILE A 270           
SHEET    4   B 9 LYS A 297  THR A 302 -1  O  TRP A 298   N  ALA A 284           
SHEET    5   B 9 ARG A 206  ARG A 210 -1  N  VAL A 209   O  LEU A 301           
SHEET    6   B 9 VAL A 183  CYS A 187  1  N  ALA A 185   O  VAL A 208           
SHEET    7   B 9 LEU A  92  TYR A 103  1  N  ALA A  94   O  ILE A 184           
SHEET    8   B 9 ARG A 122  GLU A 133 -1  O  ARG A 122   N  TYR A 103           
SHEET    9   B 9 THR A 139  TRP A 148 -1  O  GLY A 141   N  LEU A 131           
SHEET    1   C 2 LYS A 244  VAL A 246  0                                        
SHEET    2   C 2 LYS A 254  ARG A 256 -1  O  ARG A 256   N  LYS A 244           
LINK         O3'  DG B 120                MN    MN A 500     1555   1555  2.45  
LINK         OD2 ASP A  97                MN    MN A 500     1555   1555  2.09  
LINK         OD1 ASP A  97                MN    MN A 501     1555   1555  2.68  
LINK         OD2 ASP A 188                MN    MN A 501     1555   1555  2.68  
LINK         OE1 GLU A 326                MN    MN A 500     1555   1555  2.52  
LINK        MN    MN A 500                 O   HOH A 714     1555   1555  2.04  
SITE     1 AC1  5 ASP A  97  THR A  98  GLU A 326  HOH A 714                    
SITE     2 AC1  5  DG B 120                                                     
SITE     1 AC2  4 ASP A  97  ASP A 188  HOH A 692  HOH A 714                    
CRYST1  112.500  112.500  233.500  90.00  90.00 120.00 P 65 2 2     12          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.008889  0.005132  0.000000        0.00000                         
SCALE2      0.000000  0.010264  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.004283        0.00000