PDB Short entry for 1N2K HEADER HYDROLASE 23-OCT-02 1N2K TITLE CRYSTAL STRUCTURE OF A COVALENT INTERMEDIATE OF ENDOGENOUS HUMAN TITLE 2 ARYLSULFATASE A CAVEAT 1N2K NAG A 650 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARYLSULFATASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ASA, CEREBROSIDE-3-SULFATE-SULFATASE; COMPND 5 EC: 3.1.6.8 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 ORGAN: PLACENTA; SOURCE 6 CELLULAR_LOCATION: LYSOSOME KEYWDS HYDROLASE, PHOSPHATE ESTERS HYDROLYSIS, LYSOSOMAL ENZYME, MODIFIED KEYWDS 2 FORMYLGLYCINE, INHIBITION, METAL ION EXPDTA X-RAY DIFFRACTION AUTHOR M.CHRUSZCZ,P.LAIDLER,M.MONKIEWICZ,E.ORTLUND,L.LEBIODA,K.LEWINSKI REVDAT 5 29-JUL-20 1N2K 1 CAVEAT COMPND REMARK SEQADV REVDAT 5 2 1 HET HETNAM FORMUL LINK REVDAT 5 3 1 SITE ATOM REVDAT 4 04-JUL-18 1N2K 1 REMARK REVDAT 3 13-JUL-11 1N2K 1 VERSN REVDAT 2 24-FEB-09 1N2K 1 VERSN REVDAT 1 23-DEC-03 1N2K 0 JRNL AUTH M.CHRUSZCZ,P.LAIDLER,M.MONKIEWICZ,E.ORTLUND,L.LEBIODA, JRNL AUTH 2 K.LEWINSKI JRNL TITL CRYSTAL STRUCTURE OF A COVALENT INTERMEDIATE OF ENDOGENOUS JRNL TITL 2 HUMAN ARYLSULFATASE A. JRNL REF J.INORG.BIOCHEM. V. 96 386 2003 JRNL REFN ISSN 0162-0134 JRNL PMID 12888274 JRNL DOI 10.1016/S0162-0134(03)00176-4 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 88.7 REMARK 3 NUMBER OF REFLECTIONS : 18877 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 931 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1963 REMARK 3 BIN R VALUE (WORKING SET) : 0.3150 REMARK 3 BIN FREE R VALUE : 0.3790 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.45 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 107 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.037 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3609 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 48 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM SIGMAA (A) : 0.45 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.56 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.004 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.140 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 4.680 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 7.200 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 6.920 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 9.700 ; 2.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : PARAM19.SOL REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH19.SOL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1N2K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-OCT-02. REMARK 100 THE DEPOSITION ID IS D_1000017438. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAY-99 REMARK 200 TEMPERATURE (KELVIN) : 294 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21542 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CACODYLATE, SODIUM FLUORIDE, PEG8000, REMARK 280 PH 6.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 65.76000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 65.76000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 96.08500 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 65.76000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 65.76000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 96.08500 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 65.76000 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 65.76000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 96.08500 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 65.76000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 65.76000 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 96.08500 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 65.76000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 65.76000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 96.08500 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 65.76000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 65.76000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 96.08500 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 65.76000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 65.76000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 96.08500 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 65.76000 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 65.76000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 96.08500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 444 REMARK 465 VAL A 445 REMARK 465 ALA A 446 REMARK 465 GLY A 447 REMARK 465 PRO A 505 REMARK 465 HIS A 506 REMARK 465 ALA A 507 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 19 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 67 43.36 -90.29 REMARK 500 TRP A 124 -67.67 -103.43 REMARK 500 PRO A 130 -87.99 -50.96 REMARK 500 ALA A 165 47.66 -151.09 REMARK 500 CYS A 172 -165.56 58.92 REMARK 500 ASN A 184 -109.91 61.14 REMARK 500 GLN A 190 99.08 -170.53 REMARK 500 PRO A 195 2.63 -66.53 REMARK 500 MET A 289 -134.60 55.31 REMARK 500 CYS A 300 -151.95 59.37 REMARK 500 TRP A 318 89.14 -176.98 REMARK 500 HIS A 321 -51.83 -136.17 REMARK 500 CYS A 502 67.62 177.13 REMARK 500 PRO A 503 -175.84 -63.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 600 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 29 OD1 REMARK 620 2 ASP A 30 OD1 86.7 REMARK 620 3 FGP A 69 O3P 91.7 65.3 REMARK 620 4 FGP A 69 OG2 99.1 118.8 53.7 REMARK 620 5 ASP A 281 OD1 82.4 98.5 163.1 142.7 REMARK 620 6 ASP A 281 OD2 81.7 149.2 143.0 91.3 51.8 REMARK 620 7 ASN A 282 OD1 160.9 85.1 100.4 99.9 81.8 96.8 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1N2L RELATED DB: PDB REMARK 900 1N2L CONTAINS THE SAME PROTEIN AT 3.20 DBREF 1N2K A 19 507 UNP P15289 ARSA_HUMAN 19 507 SEQADV 1N2K FGP A 69 UNP P15289 CYS 69 MODIFIED RESIDUE SEQRES 1 A 489 ARG PRO PRO ASN ILE VAL LEU ILE PHE ALA ASP ASP LEU SEQRES 2 A 489 GLY TYR GLY ASP LEU GLY CYS TYR GLY HIS PRO SER SER SEQRES 3 A 489 THR THR PRO ASN LEU ASP GLN LEU ALA ALA GLY GLY LEU SEQRES 4 A 489 ARG PHE THR ASP PHE TYR VAL PRO VAL SER LEU FGP THR SEQRES 5 A 489 PRO SER ARG ALA ALA LEU LEU THR GLY ARG LEU PRO VAL SEQRES 6 A 489 ARG MET GLY MET TYR PRO GLY VAL LEU VAL PRO SER SER SEQRES 7 A 489 ARG GLY GLY LEU PRO LEU GLU GLU VAL THR VAL ALA GLU SEQRES 8 A 489 VAL LEU ALA ALA ARG GLY TYR LEU THR GLY MET ALA GLY SEQRES 9 A 489 LYS TRP HIS LEU GLY VAL GLY PRO GLU GLY ALA PHE LEU SEQRES 10 A 489 PRO PRO HIS GLN GLY PHE HIS ARG PHE LEU GLY ILE PRO SEQRES 11 A 489 TYR SER HIS ASP GLN GLY PRO CYS GLN ASN LEU THR CYS SEQRES 12 A 489 PHE PRO PRO ALA THR PRO CYS ASP GLY GLY CYS ASP GLN SEQRES 13 A 489 GLY LEU VAL PRO ILE PRO LEU LEU ALA ASN LEU SER VAL SEQRES 14 A 489 GLU ALA GLN PRO PRO TRP LEU PRO GLY LEU GLU ALA ARG SEQRES 15 A 489 TYR MET ALA PHE ALA HIS ASP LEU MET ALA ASP ALA GLN SEQRES 16 A 489 ARG GLN ASP ARG PRO PHE PHE LEU TYR TYR ALA SER HIS SEQRES 17 A 489 HIS THR HIS TYR PRO GLN PHE SER GLY GLN SER PHE ALA SEQRES 18 A 489 GLU ARG SER GLY ARG GLY PRO PHE GLY ASP SER LEU MET SEQRES 19 A 489 GLU LEU ASP ALA ALA VAL GLY THR LEU MET THR ALA ILE SEQRES 20 A 489 GLY ASP LEU GLY LEU LEU GLU GLU THR LEU VAL ILE PHE SEQRES 21 A 489 THR ALA ASP ASN GLY PRO GLU THR MET ARG MET SER ARG SEQRES 22 A 489 GLY GLY CYS SER GLY LEU LEU ARG CYS GLY LYS GLY THR SEQRES 23 A 489 THR TYR GLU GLY GLY VAL ARG GLU PRO ALA LEU ALA PHE SEQRES 24 A 489 TRP PRO GLY HIS ILE ALA PRO GLY VAL THR HIS GLU LEU SEQRES 25 A 489 ALA SER SER LEU ASP LEU LEU PRO THR LEU ALA ALA LEU SEQRES 26 A 489 ALA GLY ALA PRO LEU PRO ASN VAL THR LEU ASP GLY PHE SEQRES 27 A 489 ASP LEU SER PRO LEU LEU LEU GLY THR GLY LYS SER PRO SEQRES 28 A 489 ARG GLN SER LEU PHE PHE TYR PRO SER TYR PRO ASP GLU SEQRES 29 A 489 VAL ARG GLY VAL PHE ALA VAL ARG THR GLY LYS TYR LYS SEQRES 30 A 489 ALA HIS PHE PHE THR GLN GLY SER ALA HIS SER ASP THR SEQRES 31 A 489 THR ALA ASP PRO ALA CYS HIS ALA SER SER SER LEU THR SEQRES 32 A 489 ALA HIS GLU PRO PRO LEU LEU TYR ASP LEU SER LYS ASP SEQRES 33 A 489 PRO GLY GLU ASN TYR ASN LEU LEU GLY GLY VAL ALA GLY SEQRES 34 A 489 ALA THR PRO GLU VAL LEU GLN ALA LEU LYS GLN LEU GLN SEQRES 35 A 489 LEU LEU LYS ALA GLN LEU ASP ALA ALA VAL THR PHE GLY SEQRES 36 A 489 PRO SER GLN VAL ALA ARG GLY GLU ASP PRO ALA LEU GLN SEQRES 37 A 489 ILE CYS CYS HIS PRO GLY CYS THR PRO ARG PRO ALA CYS SEQRES 38 A 489 CYS HIS CYS PRO ASP PRO HIS ALA MODRES 1N2K ASN A 158 ASN GLYCOSYLATION SITE MODRES 1N2K ASN A 184 ASN GLYCOSYLATION SITE MODRES 1N2K FGP A 69 SER HET FGP A 69 11 HET NAG B 1 14 HET NAG B 2 14 HET NAG A 650 14 HET CA A 600 1 HETNAM FGP 2-AMINO-3-HYDROXY-3-PHOSPHONOOXY-PROPIONIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION FORMUL 1 FGP C3 H8 N O7 P FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 4 CA CA 2+ FORMUL 5 HOH *48(H2 O) HELIX 1 1 LEU A 36 GLY A 40 5 5 HELIX 2 2 THR A 46 GLY A 55 1 10 HELIX 3 3 LEU A 68 GLY A 79 1 12 HELIX 4 4 THR A 106 ALA A 113 1 8 HELIX 5 5 LEU A 135 GLN A 139 5 5 HELIX 6 6 TRP A 193 PRO A 195 5 3 HELIX 7 7 GLY A 196 GLN A 215 1 20 HELIX 8 8 GLY A 245 LEU A 268 1 24 HELIX 9 9 LEU A 270 GLU A 272 5 3 HELIX 10 10 GLU A 285 GLY A 292 5 8 HELIX 11 11 TYR A 306 ARG A 311 1 6 HELIX 12 12 ASP A 335 GLY A 345 1 11 HELIX 13 13 LEU A 358 LEU A 363 1 6 HELIX 14 14 SER A 403 ASP A 407 5 5 HELIX 15 15 THR A 449 VAL A 470 1 22 HELIX 16 16 GLN A 476 GLY A 480 5 5 HELIX 17 17 ASP A 482 GLN A 486 5 5 SHEET 1 A10 SER A 186 ALA A 189 0 SHEET 2 A10 LEU A 181 ALA A 183 -1 N ALA A 183 O SER A 186 SHEET 3 A10 ARG A 143 GLY A 146 -1 N GLY A 146 O LEU A 182 SHEET 4 A10 LEU A 117 GLY A 122 1 N MET A 120 O LEU A 145 SHEET 5 A10 PHE A 219 ALA A 224 1 O TYR A 222 N GLY A 119 SHEET 6 A10 ASN A 22 ALA A 28 1 N PHE A 27 O TYR A 223 SHEET 7 A10 THR A 274 ALA A 280 1 O THR A 279 N ALA A 28 SHEET 8 A10 ALA A 314 PHE A 317 -1 O PHE A 317 N VAL A 276 SHEET 9 A10 LEU A 57 PHE A 59 -1 N LEU A 57 O ALA A 316 SHEET 10 A10 GLY A 325 THR A 327 1 O THR A 327 N ARG A 58 SHEET 1 B 2 PHE A 62 TYR A 63 0 SHEET 2 B 2 ALA A 331 SER A 332 1 O ALA A 331 N TYR A 63 SHEET 1 C 2 THR A 160 PHE A 162 0 SHEET 2 C 2 THR A 166 PRO A 167 -1 O THR A 166 N PHE A 162 SHEET 1 D 4 SER A 372 PHE A 375 0 SHEET 2 D 4 ALA A 388 THR A 391 -1 O ALA A 388 N PHE A 375 SHEET 3 D 4 TYR A 394 THR A 400 -1 O ALA A 396 N VAL A 389 SHEET 4 D 4 THR A 421 ASP A 430 -1 O TYR A 429 N LYS A 395 SSBOND 1 CYS A 156 CYS A 172 1555 1555 2.03 SSBOND 2 CYS A 161 CYS A 168 1555 1555 2.03 SSBOND 3 CYS A 300 CYS A 414 1555 1555 2.03 SSBOND 4 CYS A 488 CYS A 500 1555 1555 2.03 SSBOND 5 CYS A 489 CYS A 502 1555 1555 2.04 SSBOND 6 CYS A 493 CYS A 499 1555 1555 2.03 LINK C LEU A 68 N FGP A 69 1555 1555 1.33 LINK C FGP A 69 N THR A 70 1555 1555 1.33 LINK ND2 ASN A 158 C1 NAG A 650 1555 1555 1.46 LINK ND2 ASN A 184 C1 NAG B 1 1555 1555 1.46 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.41 LINK OD1 ASP A 29 CA CA A 600 1555 1555 2.41 LINK OD1 ASP A 30 CA CA A 600 1555 1555 2.59 LINK O3P FGP A 69 CA CA A 600 1555 1555 3.03 LINK OG2 FGP A 69 CA CA A 600 1555 1555 2.41 LINK OD1 ASP A 281 CA CA A 600 1555 1555 2.70 LINK OD2 ASP A 281 CA CA A 600 1555 1555 2.23 LINK OD1 ASN A 282 CA CA A 600 1555 1555 2.54 CISPEP 1 TYR A 88 PRO A 89 0 -0.37 CISPEP 2 PRO A 163 PRO A 164 0 0.15 CISPEP 3 GLN A 190 PRO A 191 0 -0.01 CISPEP 4 TYR A 230 PRO A 231 0 -0.75 CISPEP 5 GLU A 424 PRO A 425 0 -0.15 CISPEP 6 THR A 494 PRO A 495 0 -0.34 CISPEP 7 ARG A 496 PRO A 497 0 -0.24 CRYST1 131.520 131.520 192.170 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007603 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007603 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005204 0.00000