PDB Short entry for 1NN6 HEADER HYDROLASE 12-JAN-03 1NN6 TITLE HUMAN PRO-CHYMASE CAVEAT 1NN6 NAG A 302 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHYMASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAST CELL PROTEASE I; COMPND 5 EC: 3.4.21.39; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HUMAN MAST CELL CHYMASE GENE; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HIGH FIVE (TRICHOPLUSIA NI) CELLS; SOURCE 10 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS SERINE PROTEASE, ZYMOGEN, CHYMASE, CONFORMATIONAL CHANGE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.K.REILING,J.KRUCINSKI,L.J.W.MIERCKE,W.W.RAYMOND,G.H.CAUGHEY, AUTHOR 2 R.M.STROUD REVDAT 7 16-AUG-23 1NN6 1 HETSYN REVDAT 6 29-JUL-20 1NN6 1 CAVEAT COMPND REMARK HETNAM REVDAT 6 2 1 LINK SITE ATOM REVDAT 5 31-JAN-18 1NN6 1 JRNL REVDAT 4 13-JUL-11 1NN6 1 VERSN REVDAT 3 24-FEB-09 1NN6 1 VERSN REVDAT 2 08-APR-03 1NN6 1 JRNL REVDAT 1 04-MAR-03 1NN6 0 JRNL AUTH K.K.REILING,J.KRUCINSKI,L.J.MIERCKE,W.W.RAYMOND,G.H.CAUGHEY, JRNL AUTH 2 R.M.STROUD JRNL TITL STRUCTURE OF HUMAN PRO-CHYMASE: A MODEL FOR THE ACTIVATING JRNL TITL 2 TRANSITION OF GRANULE-ASSOCIATED PROTEASES. JRNL REF BIOCHEMISTRY V. 42 2616 2003 JRNL REFN ISSN 0006-2960 JRNL PMID 12614156 JRNL DOI 10.1021/BI020594D REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.E.MCGRATH,T.MIRZADEGAN,B.F.SCHMIDT REMARK 1 TITL CRYSTAL STRUCTURE OF PHENYLMETHANESULFONYL FLUORIDE-TREATED REMARK 1 TITL 2 HUMAN CHYMASE AT 1.9 A REMARK 1 REF BIOCHEMISTRY V. 36 14318 1997 REMARK 1 REFN ISSN 0006-2960 REMARK 1 DOI 10.1021/BI971403N REMARK 1 REFERENCE 2 REMARK 1 AUTH P.J.PEREIRA,Z.M.WANG,H.RUBIN,R.HUBER,W.BODE,N.M.SCHECHTER, REMARK 1 AUTH 2 S.STROBL REMARK 1 TITL THE 2.2 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH REMARK 1 TITL 2 SUCCINYL-ALA-ALA-PRO-PHE-CHLOROMETHYLKETONE: STRUCTURAL REMARK 1 TITL 3 EXPLANATION FOR ITS DIPEPTIDYL CARBOXYPEPTIDASE SPECIFICITY REMARK 1 REF J.MOL.BIOL. V. 286 163 1999 REMARK 1 REFN ISSN 0022-2836 REMARK 1 DOI 10.1006/JMBI.1998.2462 REMARK 1 REFERENCE 3 REMARK 1 AUTH A.A.KOSSIAKOFF,J.L.CHAMBERS,L.M.KAY,R.M.STROUD REMARK 1 TITL STRUCTURE OF BOVINE TRYPSINOGEN AT 1.9 A RESOLUTION. REMARK 1 REF BIOCHEMISTRY V. 16 654 1977 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 4 REMARK 1 AUTH G.H.CAUGHEY,E.H.ZERWECK,P.VANDERSLICE REMARK 1 TITL STRUCTURE, CHROMOSOMAL ASSIGNMENT, AND DEDUCED AMINO ACID REMARK 1 TITL 2 SEQUENCE OF A HUMAN GENE FOR MAST CELL CHYMASE. REMARK 1 REF J.BIOL.CHEM. V. 266 12956 1991 REMARK 1 REFN ISSN 0021-9258 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 24317 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM WITHIN SHELLS REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1235 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1767 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE SET COUNT : 87 REMARK 3 BIN FREE R VALUE : 0.3880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1691 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 153 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1791 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1605 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2433 ; 1.803 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3722 ; 1.218 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 220 ; 5.018 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 307 ;19.044 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 273 ; 0.146 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1956 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 361 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 328 ; 0.246 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1483 ; 0.211 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 3 ; 0.621 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 173 ; 0.225 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.377 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 24 ; 0.235 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.456 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1104 ; 1.023 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1779 ; 1.776 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 687 ; 2.609 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 654 ; 4.144 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1NN6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JAN-03. REMARK 100 THE DEPOSITION ID IS D_1000018026. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAR-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.08 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(311) BENT REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 222007 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 28.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 26.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.55200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1KLT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 4K, 150MM NA FORMATE, AND 100 REMARK 280 MM TRIS , PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.34400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.34300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.81950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.34300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.34400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.81950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 14 REMARK 465 GLU A 15 REMARK 465 ILE A 16 REMARK 465 ILE A 17 REMARK 465 LYS A 190 REMARK 465 SER A 191 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 21 CG CD OE1 OE2 REMARK 470 LYS A 43 NZ REMARK 470 LYS A 89 CE NZ REMARK 470 GLN A 128 CG CD OE1 NE2 REMARK 470 ARG A 139 CD NE CZ NH1 NH2 REMARK 470 LEU A 149 CG CD1 CD2 REMARK 470 LYS A 150 CE NZ REMARK 470 GLN A 167 CD OE1 NE2 REMARK 470 ARG A 173 CZ NH1 NH2 REMARK 470 ARG A 187 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 188 CD CE NZ REMARK 470 LYS A 219 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 86 NZ LYS A 111 2.14 REMARK 500 O HOH A 377 O HOH A 378 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 79 NZ LYS A 111 4456 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 96 CZ TYR A 96 CE2 -0.080 REMARK 500 LYS A 111 CE LYS A 111 NZ 0.153 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR A 67 CA - CB - CG2 ANGL. DEV. = 9.2 DEGREES REMARK 500 GLY A 152 N - CA - C ANGL. DEV. = -15.3 DEGREES REMARK 500 ASP A 174 CB - CG - OD2 ANGL. DEV. = 7.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 57 -167.98 -161.33 REMARK 500 HIS A 73 -72.51 -129.19 REMARK 500 LYS A 188 -17.97 -144.28 REMARK 500 LYS A 194 27.13 -143.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1KLT RELATED DB: PDB DBREF 1NN6 A 14 241 UNP P23946 MCT1_HUMAN 20 247 SEQRES 1 A 228 GLY GLU ILE ILE GLY GLY THR GLU CYS LYS PRO HIS SER SEQRES 2 A 228 ARG PRO TYR MET ALA TYR LEU GLU ILE VAL THR SER ASN SEQRES 3 A 228 GLY PRO SER LYS PHE CYS GLY GLY PHE LEU ILE ARG ARG SEQRES 4 A 228 ASN PHE VAL LEU THR ALA ALA HIS CYS ALA GLY ARG SER SEQRES 5 A 228 ILE THR VAL THR LEU GLY ALA HIS ASN ILE THR GLU GLU SEQRES 6 A 228 GLU ASP THR TRP GLN LYS LEU GLU VAL ILE LYS GLN PHE SEQRES 7 A 228 ARG HIS PRO LYS TYR ASN THR SER THR LEU HIS HIS ASP SEQRES 8 A 228 ILE MET LEU LEU LYS LEU LYS GLU LYS ALA SER LEU THR SEQRES 9 A 228 LEU ALA VAL GLY THR LEU PRO PHE PRO SER GLN PHE ASN SEQRES 10 A 228 PHE VAL PRO PRO GLY ARG MET CYS ARG VAL ALA GLY TRP SEQRES 11 A 228 GLY ARG THR GLY VAL LEU LYS PRO GLY SER ASP THR LEU SEQRES 12 A 228 GLN GLU VAL LYS LEU ARG LEU MET ASP PRO GLN ALA CYS SEQRES 13 A 228 SER HIS PHE ARG ASP PHE ASP HIS ASN LEU GLN LEU CYS SEQRES 14 A 228 VAL GLY ASN PRO ARG LYS THR LYS SER ALA PHE LYS GLY SEQRES 15 A 228 ASP SER GLY GLY PRO LEU LEU CYS ALA GLY VAL ALA GLN SEQRES 16 A 228 GLY ILE VAL SER TYR GLY ARG SER ASP ALA LYS PRO PRO SEQRES 17 A 228 ALA VAL PHE THR ARG ILE SER HIS TYR ARG PRO TRP ILE SEQRES 18 A 228 ASN GLN ILE LEU GLN ALA ASN MODRES 1NN6 ASN A 74 ASN GLYCOSYLATION SITE MODRES 1NN6 ASN A 97 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET NAG A 302 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 4 HOH *153(H2 O) HELIX 1 1 ALA A 58 ALA A 62 5 5 HELIX 2 2 ASP A 165 SER A 170 5 6 HELIX 3 3 ILE A 227 ALA A 240 1 14 SHEET 1 A 7 THR A 20 GLU A 21 0 SHEET 2 A 7 GLN A 157 ARG A 162 -1 O GLU A 158 N THR A 20 SHEET 3 A 7 MET A 137 GLY A 142 -1 N CYS A 138 O LEU A 161 SHEET 4 A 7 PRO A 200 CYS A 203 -1 O LEU A 202 N ARG A 139 SHEET 5 A 7 VAL A 206 TYR A 213 -1 O GLY A 209 N LEU A 201 SHEET 6 A 7 ALA A 222 ARG A 226 -1 O VAL A 223 N TYR A 213 SHEET 7 A 7 GLN A 180 VAL A 183 -1 N LEU A 181 O PHE A 224 SHEET 1 B 7 MET A 30 VAL A 36 0 SHEET 2 B 7 SER A 42 ARG A 51 -1 O LYS A 43 N ILE A 35 SHEET 3 B 7 PHE A 54 THR A 57 -1 O LEU A 56 N PHE A 48 SHEET 4 B 7 MET A 106 LEU A 110 -1 O LEU A 108 N VAL A 55 SHEET 5 B 7 GLN A 83 ARG A 92 -1 N PHE A 91 O LEU A 107 SHEET 6 B 7 SER A 65 LEU A 70 -1 N VAL A 68 O LEU A 85 SHEET 7 B 7 MET A 30 VAL A 36 -1 N TYR A 32 O THR A 69 SSBOND 1 CYS A 45 CYS A 61 1555 1555 2.10 SSBOND 2 CYS A 138 CYS A 203 1555 1555 2.06 SSBOND 3 CYS A 169 CYS A 182 1555 1555 2.08 LINK ND2 ASN A 74 C1 NAG B 1 1555 1555 1.46 LINK ND2 ASN A 97 C1 NAG A 302 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.87 CISPEP 1 PRO A 151 GLY A 152 0 7.02 CISPEP 2 PRO A 220 PRO A 221 0 0.94 CRYST1 50.688 55.639 88.686 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019729 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017973 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011276 0.00000