PDB Short entry for 1O3T HEADER GENE REGULATION/DNA 18-MAR-03 1O3T TITLE PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL TITLE 2 STRUCTURES OF CAP-DNA COMPLEXES COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*GP*CP*GP*AP*AP*AP*AP*AP*TP*GP*CP*GP*AP*T)-3'; COMPND 3 CHAIN: C, F; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 5'-D(*CP*TP*AP*GP*AP*TP*CP*GP*CP*AP*TP*TP*TP*TP*TP*CP*G)- COMPND 7 3'; COMPND 8 CHAIN: D, E; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: CATABOLITE GENE ACTIVATOR PROTEIN; COMPND 12 CHAIN: A, B; COMPND 13 SYNONYM: CAP, CAMP RECEPTOR PROTEIN, CAMP-REGULATORY PROTEIN; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 7 ORGANISM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN-DNA COMPLEX, CAP, CAP-DNA, CATABOLITE GENE ACTIVATOR PROTEIN, KEYWDS 2 CAMP RECEPTOR PROTEIN, CRP, GENE REGULATION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.CHEN,J.VOJTECHOVSKY,G.N.PARKINSON,R.H.EBRIGHT,H.M.BERMAN REVDAT 5 27-DEC-23 1O3T 1 REMARK REVDAT 4 04-OCT-17 1O3T 1 REMARK REVDAT 3 24-FEB-09 1O3T 1 VERSN REVDAT 2 10-JUN-03 1O3T 1 JRNL REVDAT 1 08-APR-03 1O3T 0 SPRSDE 08-APR-03 1O3T 1DBC JRNL AUTH S.CHEN,J.VOJTECHOVSKY,G.N.PARKINSON,R.H.EBRIGHT,H.M.BERMAN JRNL TITL INDIRECT READOUT OF DNA SEQUENCE AT THE PRIMARY-KINK SITE IN JRNL TITL 2 THE CAP-DNA COMPLEX: DNA BINDING SPECIFICITY BASED ON JRNL TITL 3 ENERGETICS OF DNA KINKING JRNL REF J.MOL.BIOL. V. 314 63 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11724532 JRNL DOI 10.1006/JMBI.2001.5089 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.CHEN,A.GUNASEKERA,X.ZHANG,T.A.KUNKEL,R.H.EBRIGHT, REMARK 1 AUTH 2 H.M.BERMAN REMARK 1 TITL INDIRECT READOUT OF DNA SEQUENCE AT THE PRIMARY-KINK SITE IN REMARK 1 TITL 2 THE CAP-DNA COMPLEX: ALTERATION OF DNA BINDING SPECIFICITY REMARK 1 TITL 3 THROUGH ALTERATION OF DNA KINKING REMARK 1 REF J.MOL.BIOL. V. 314 75 2001 REMARK 1 REFN ISSN 0022-2836 REMARK 1 DOI 10.1006/JMBI.2001.5090 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.5 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1827714.040 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 72.2 REMARK 3 NUMBER OF REFLECTIONS : 14452 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.303 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 747 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.011 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.97 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 56.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1752 REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE : 0.3740 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 85 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.041 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3129 REMARK 3 NUCLEIC ACID ATOMS : 1262 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 56 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 18.78000 REMARK 3 B22 (A**2) : -11.72000 REMARK 3 B33 (A**2) : -7.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM SIGMAA (A) : 0.36 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.49 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.54 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.070 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.330 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.250 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.250 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.280 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 55.06 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : CMP.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : CMP.TOP REMARK 3 TOPOLOGY FILE 4 : WATER.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1O3T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-APR-03. REMARK 100 THE DEPOSITION ID IS D_1000001769. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-SEP-93 REMARK 200 TEMPERATURE (KELVIN) : 258.0 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 4 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.908 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : FUJI REMARK 200 INTENSITY-INTEGRATION SOFTWARE : VRIED REMARK 200 DATA SCALING SOFTWARE : VRIED REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14452 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, MES, NACL, MGCL2, CACL2, REMARK 280 CAMP, NAN3, DITHIOTHREITOL, SPERMINE, N-OCTYL-B-D- REMARK 280 GLUCOPYRANOSIDE, PH 5.5, VAPOR DIFFUSION, HANGING DROP AT 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.03000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.03000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 68.49500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 76.40000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 68.49500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 76.40000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.03000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 68.49500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 76.40000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 38.03000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 68.49500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 76.40000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, E, F, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 8 REMARK 465 ASP B 8 REMARK 465 TYR B 206 REMARK 465 GLY B 207 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP2 DA D 9 OG1 THR A 182 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 154 C - N - CA ANGL. DEV. = 11.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 18 73.37 -171.19 REMARK 500 HIS A 19 136.55 -34.95 REMARK 500 SER A 25 135.70 -34.19 REMARK 500 GLU A 34 150.76 -37.22 REMARK 500 GLU A 37 3.32 -160.16 REMARK 500 LYS A 44 140.86 -176.96 REMARK 500 VAL A 47 -166.13 -112.09 REMARK 500 SER A 62 171.57 171.07 REMARK 500 ASN A 65 -166.04 -109.11 REMARK 500 ILE A 97 -58.63 -123.63 REMARK 500 SER A 98 129.85 122.05 REMARK 500 ILE A 106 -63.70 -90.08 REMARK 500 ASN A 109 75.11 -161.85 REMARK 500 PRO A 110 -2.58 -55.21 REMARK 500 ILE A 112 -9.99 -54.86 REMARK 500 MET A 114 -76.06 -83.98 REMARK 500 ARG A 115 -53.05 -24.66 REMARK 500 ALA A 121 -71.72 -35.19 REMARK 500 THR A 140 -78.02 -58.98 REMARK 500 ALA A 151 -12.88 -44.14 REMARK 500 PRO A 154 73.45 -56.49 REMARK 500 ASP A 155 15.73 162.01 REMARK 500 GLU A 181 -88.01 -62.42 REMARK 500 THR A 182 -28.90 -26.25 REMARK 500 ALA A 198 -113.11 -110.92 REMARK 500 HIS A 199 84.39 77.57 REMARK 500 VAL A 205 77.48 59.09 REMARK 500 TYR A 206 157.07 53.43 REMARK 500 LEU B 11 -1.18 -56.75 REMARK 500 SER B 25 80.65 -67.28 REMARK 500 LYS B 26 -15.42 137.64 REMARK 500 LYS B 35 107.32 30.12 REMARK 500 GLU B 37 25.42 -141.73 REMARK 500 ILE B 42 105.50 -34.27 REMARK 500 GLU B 54 -66.47 -15.18 REMARK 500 GLU B 55 0.12 -56.70 REMARK 500 GLN B 66 93.69 -58.26 REMARK 500 LEU B 73 -0.89 -40.23 REMARK 500 GLU B 78 160.97 -49.05 REMARK 500 ARG B 82 157.94 -24.56 REMARK 500 THR B 90 -145.19 -107.80 REMARK 500 ILE B 97 139.31 -175.45 REMARK 500 VAL B 108 -72.12 -66.53 REMARK 500 ALA B 121 -34.42 176.87 REMARK 500 GLN B 125 -70.38 -73.68 REMARK 500 VAL B 139 -51.89 -9.61 REMARK 500 THR B 140 -73.31 -53.23 REMARK 500 LYS B 152 -124.18 -87.44 REMARK 500 GLN B 153 132.59 -10.69 REMARK 500 PRO B 154 170.76 -18.60 REMARK 500 REMARK 500 THIS ENTRY HAS 58 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CMP B 761 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CMP A 762 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1O3Q RELATED DB: PDB REMARK 900 RELATED ID: 1O3R RELATED DB: PDB REMARK 900 RELATED ID: 1O3S RELATED DB: PDB DBREF 1O3T A 8 207 UNP P0ACJ8 CRP_ECOLI 9 208 DBREF 1O3T B 8 207 UNP P0ACJ8 CRP_ECOLI 9 208 DBREF 1O3T C -5 9 PDB 1O3T 1O3T -5 9 DBREF 1O3T D 13 -4 PDB 1O3T 1O3T 13 -4 DBREF 1O3T E 10 26 PDB 1O3T 1O3T 10 26 DBREF 1O3T F 27 14 PDB 1O3T 1O3T 27 14 SEQRES 1 C 14 DG DC DG DA DA DA DA DA DT DG DC DG DA SEQRES 2 C 14 DT SEQRES 1 D 17 DC DT DA DG DA DT DC DG DC DA DT DT DT SEQRES 2 D 17 DT DT DC DG SEQRES 1 E 17 DC DT DA DG DA DT DC DG DC DA DT DT DT SEQRES 2 E 17 DT DT DC DG SEQRES 1 F 14 DG DC DG DA DA DA DA DA DT DG DC DG DA SEQRES 2 F 14 DT SEQRES 1 A 200 ASP PRO THR LEU GLU TRP PHE LEU SER HIS CYS HIS ILE SEQRES 2 A 200 HIS LYS TYR PRO SER LYS SER THR LEU ILE HIS GLN GLY SEQRES 3 A 200 GLU LYS ALA GLU THR LEU TYR TYR ILE VAL LYS GLY SER SEQRES 4 A 200 VAL ALA VAL LEU ILE LYS ASP GLU GLU GLY LYS GLU MET SEQRES 5 A 200 ILE LEU SER TYR LEU ASN GLN GLY ASP PHE ILE GLY GLU SEQRES 6 A 200 LEU GLY LEU PHE GLU GLU GLY GLN GLU ARG SER ALA TRP SEQRES 7 A 200 VAL ARG ALA LYS THR ALA CYS GLU VAL ALA GLU ILE SER SEQRES 8 A 200 TYR LYS LYS PHE ARG GLN LEU ILE GLN VAL ASN PRO ASP SEQRES 9 A 200 ILE LEU MET ARG LEU SER ALA GLN MET ALA ARG ARG LEU SEQRES 10 A 200 GLN VAL THR SER GLU LYS VAL GLY ASN LEU ALA PHE LEU SEQRES 11 A 200 ASP VAL THR GLY ARG ILE ALA GLN THR LEU LEU ASN LEU SEQRES 12 A 200 ALA LYS GLN PRO ASP ALA MET THR HIS PRO ASP GLY MET SEQRES 13 A 200 GLN ILE LYS ILE THR ARG GLN GLU ILE GLY GLN ILE VAL SEQRES 14 A 200 GLY CYS SER ARG GLU THR VAL GLY ARG ILE LEU LYS MET SEQRES 15 A 200 LEU GLU ASP GLN ASN LEU ILE SER ALA HIS GLY LYS THR SEQRES 16 A 200 ILE VAL VAL TYR GLY SEQRES 1 B 200 ASP PRO THR LEU GLU TRP PHE LEU SER HIS CYS HIS ILE SEQRES 2 B 200 HIS LYS TYR PRO SER LYS SER THR LEU ILE HIS GLN GLY SEQRES 3 B 200 GLU LYS ALA GLU THR LEU TYR TYR ILE VAL LYS GLY SER SEQRES 4 B 200 VAL ALA VAL LEU ILE LYS ASP GLU GLU GLY LYS GLU MET SEQRES 5 B 200 ILE LEU SER TYR LEU ASN GLN GLY ASP PHE ILE GLY GLU SEQRES 6 B 200 LEU GLY LEU PHE GLU GLU GLY GLN GLU ARG SER ALA TRP SEQRES 7 B 200 VAL ARG ALA LYS THR ALA CYS GLU VAL ALA GLU ILE SER SEQRES 8 B 200 TYR LYS LYS PHE ARG GLN LEU ILE GLN VAL ASN PRO ASP SEQRES 9 B 200 ILE LEU MET ARG LEU SER ALA GLN MET ALA ARG ARG LEU SEQRES 10 B 200 GLN VAL THR SER GLU LYS VAL GLY ASN LEU ALA PHE LEU SEQRES 11 B 200 ASP VAL THR GLY ARG ILE ALA GLN THR LEU LEU ASN LEU SEQRES 12 B 200 ALA LYS GLN PRO ASP ALA MET THR HIS PRO ASP GLY MET SEQRES 13 B 200 GLN ILE LYS ILE THR ARG GLN GLU ILE GLY GLN ILE VAL SEQRES 14 B 200 GLY CYS SER ARG GLU THR VAL GLY ARG ILE LEU LYS MET SEQRES 15 B 200 LEU GLU ASP GLN ASN LEU ILE SER ALA HIS GLY LYS THR SEQRES 16 B 200 ILE VAL VAL TYR GLY HET CMP A 762 22 HET CMP B 761 22 HETNAM CMP ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE HETSYN CMP CYCLIC AMP; CAMP FORMUL 7 CMP 2(C10 H12 N5 O6 P) FORMUL 9 HOH *56(H2 O) HELIX 1 1 LEU A 11 HIS A 17 1 7 HELIX 2 2 SER A 98 VAL A 108 1 11 HELIX 3 3 ASP A 111 LEU A 137 1 27 HELIX 4 4 THR A 140 LYS A 152 1 13 HELIX 5 5 THR A 168 GLY A 177 1 10 HELIX 6 6 SER A 179 GLN A 193 1 15 HELIX 7 7 THR B 10 SER B 16 1 7 HELIX 8 8 SER B 98 ASN B 109 1 12 HELIX 9 9 ILE B 112 PHE B 136 1 25 HELIX 10 10 ASP B 138 LYS B 152 1 15 HELIX 11 11 THR B 168 GLY B 177 1 10 HELIX 12 12 SER B 179 ASN B 194 1 16 SHEET 1 A 4 ILE A 20 TYR A 23 0 SHEET 2 A 4 CYS A 92 GLU A 96 -1 O VAL A 94 N HIS A 21 SHEET 3 A 4 TYR A 40 LYS A 44 -1 N TYR A 41 O ALA A 95 SHEET 4 A 4 PHE A 69 ILE A 70 -1 O ILE A 70 N TYR A 40 SHEET 1 B 4 THR A 28 ILE A 30 0 SHEET 2 B 4 TRP A 85 ARG A 87 -1 O VAL A 86 N ILE A 30 SHEET 3 B 4 VAL A 47 LYS A 52 -1 N LEU A 50 O TRP A 85 SHEET 4 B 4 GLU A 58 LEU A 64 -1 O SER A 62 N VAL A 49 SHEET 1 C 3 MET A 157 THR A 158 0 SHEET 2 C 3 MET A 163 ILE A 165 -1 O GLN A 164 N MET A 157 SHEET 3 C 3 THR A 202 VAL A 204 -1 O VAL A 204 N MET A 163 SHEET 1 D 3 PHE B 69 ILE B 70 0 SHEET 2 D 3 TYR B 40 LYS B 44 -1 N TYR B 40 O ILE B 70 SHEET 3 D 3 GLU B 93 VAL B 94 -1 O GLU B 93 N LYS B 44 SHEET 1 E 3 GLU B 58 TYR B 63 0 SHEET 2 E 3 VAL B 47 LYS B 52 -1 N VAL B 49 O SER B 62 SHEET 3 E 3 TRP B 85 ALA B 88 -1 O TRP B 85 N LEU B 50 SHEET 1 F 2 THR B 158 HIS B 159 0 SHEET 2 F 2 GLY B 162 MET B 163 -1 O GLY B 162 N HIS B 159 SITE 1 AC1 13 LEU A 124 SER A 128 ILE B 30 VAL B 49 SITE 2 AC1 13 SER B 62 GLY B 71 GLU B 72 LEU B 73 SITE 3 AC1 13 ARG B 82 SER B 83 ALA B 84 ARG B 123 SITE 4 AC1 13 THR B 127 SITE 1 AC2 12 VAL A 49 LEU A 61 ILE A 70 GLY A 71 SITE 2 AC2 12 GLU A 72 LEU A 73 ARG A 82 SER A 83 SITE 3 AC2 12 ALA A 84 THR A 127 LEU B 124 SER B 128 CRYST1 136.990 152.800 76.060 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007300 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006545 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013148 0.00000