PDB Short entry for 1O7D HEADER HYDROLASE 30-OCT-02 1O7D TITLE THE STRUCTURE OF THE BOVINE LYSOSOMAL A-MANNOSIDASE SUGGESTS A NOVEL TITLE 2 MECHANISM FOR LOW PH ACTIVATION CAVEAT 1O7D NAG F 1 HAS WRONG CHIRALITY AT ATOM C1 NAG G 2 HAS WRONG CAVEAT 2 1O7D CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOSOMAL ALPHA-MANNOSIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ALPHA-MANNOSIDASE A PEPTIDE, RESIDUES 51-347; COMPND 5 SYNONYM: LAMAN,LYSOSOMAL ACID ALPHA-MANNOSIDASE,MANNOSIDASE ALPHA COMPND 6 CLASS 2B MEMBER 1,MANNOSIDASE ALPHA-B; COMPND 7 EC: 3.2.1.24; COMPND 8 OTHER_DETAILS: GLYCOSYLATED; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: LYSOSOMAL ALPHA-MANNOSIDASE; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: ALPHA-MANNOSIDASE B PEPTIDE, RESIDUES 348-431; COMPND 13 SYNONYM: LAMAN,LYSOSOMAL ACID ALPHA-MANNOSIDASE,MANNOSIDASE ALPHA COMPND 14 CLASS 2B MEMBER 1,MANNOSIDASE ALPHA-B; COMPND 15 EC: 3.2.1.24; COMPND 16 OTHER_DETAILS: GLYCOSYLATED; COMPND 17 MOL_ID: 3; COMPND 18 MOLECULE: LYSOSOMAL ALPHA-MANNOSIDASE; COMPND 19 CHAIN: C; COMPND 20 FRAGMENT: ALPHA-MANNOSIDASE C PEPTIDE, RESIDUES 432-590; COMPND 21 SYNONYM: LAMAN,LYSOSOMAL ACID ALPHA-MANNOSIDASE,MANNOSIDASE ALPHA COMPND 22 CLASS 2B MEMBER 1,MANNOSIDASE ALPHA-B; COMPND 23 EC: 3.2.1.24; COMPND 24 OTHER_DETAILS: GLYCOSYLATED; COMPND 25 MOL_ID: 4; COMPND 26 MOLECULE: LYSOSOMAL ALPHA-MANNOSIDASE; COMPND 27 CHAIN: D; COMPND 28 FRAGMENT: ALPHA-MANNOSIDASE D PEPTIDE, RESIDUES 592-873; COMPND 29 SYNONYM: LAMAN,LYSOSOMAL ACID ALPHA-MANNOSIDASE,MANNOSIDASE ALPHA COMPND 30 CLASS 2B MEMBER 1,MANNOSIDASE ALPHA-B; COMPND 31 EC: 3.2.1.24; COMPND 32 OTHER_DETAILS: GLYCOSYLATED; COMPND 33 MOL_ID: 5; COMPND 34 MOLECULE: LYSOSOMAL ALPHA-MANNOSIDASE; COMPND 35 CHAIN: E; COMPND 36 FRAGMENT: ALPHA-MANNOSIDASE E PEPTIDE, RESIDUES 874-999; COMPND 37 SYNONYM: LAMAN,LYSOSOMAL ACID ALPHA-MANNOSIDASE,MANNOSIDASE ALPHA COMPND 38 CLASS 2B MEMBER 1,MANNOSIDASE ALPHA-B; COMPND 39 EC: 3.2.1.24; COMPND 40 OTHER_DETAILS: GLYCOSYLATED SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 ORGAN: KIDNEY; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 8 ORGANISM_COMMON: BOVINE; SOURCE 9 ORGANISM_TAXID: 9913; SOURCE 10 ORGAN: KIDNEY; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 13 ORGANISM_COMMON: BOVINE; SOURCE 14 ORGANISM_TAXID: 9913; SOURCE 15 ORGAN: KIDNEY; SOURCE 16 MOL_ID: 4; SOURCE 17 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 18 ORGANISM_COMMON: BOVINE; SOURCE 19 ORGANISM_TAXID: 9913; SOURCE 20 ORGAN: KIDNEY; SOURCE 21 MOL_ID: 5; SOURCE 22 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 23 ORGANISM_COMMON: BOVINE; SOURCE 24 ORGANISM_TAXID: 9913; SOURCE 25 ORGAN: KIDNEY KEYWDS HYDROLASE, GLYCOSYL HYDROLASE FAMILY 38, A-MANNOSIDASE, LYSOSOMAL EXPDTA X-RAY DIFFRACTION AUTHOR P.HEIKINHEIMO,R.HELLAND,H.S.LEIROS,I.LEIROS,S.KARLSEN,G.EVJEN, AUTHOR 2 R.RAVELLI,G.SCHOEHN,R.RUIGROK,O.-K.TOLLERSRUD,S.MCSWEENEY,E.HOUGH REVDAT 4 29-JUL-20 1O7D 1 CAVEAT COMPND REMARK HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 11-JUL-18 1O7D 1 CAVEAT COMPND SOURCE DBREF REVDAT 3 2 1 SEQADV HET HETNAM HETSYN REVDAT 3 3 1 FORMUL LINK SITE ATOM REVDAT 2 24-FEB-09 1O7D 1 VERSN REVDAT 1 20-MAR-03 1O7D 0 JRNL AUTH P.HEIKINHEIMO,R.HELLAND,H.S.LEIROS,I.LEIROS,S.KARLSEN, JRNL AUTH 2 G.EVJEN,R.RAVELLI,G.SCHOEHN,R.RUIGROK,O.-K.TOLLERSRUD, JRNL AUTH 3 S.MCSWEENEY,E.HOUGH JRNL TITL THE STRUCTURE OF BOVINE LYSOSOMAL ALPHA-MANNOSIDASE SUGGESTS JRNL TITL 2 A NOVEL MECHANISM FOR LOW-PH ACTIVATION JRNL REF J.MOL.BIOL. V. 327 631 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 12634058 JRNL DOI 10.1016/S0022-2836(03)00172-4 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH O.-K.TOLLERSRUD,T.BERG,P.HEALY,G.EVJEN,U.RAMACHANDRAN REMARK 1 TITL PURIFICATION OF BOVINE LYSOSOMAL A-MANNOSIDASE, REMARK 1 TITL 2 CHARACTERIZATION OF ITS GENE AND DETERMINATION OF TWO REMARK 1 TITL 3 MUTATIONS THAT CAUSE A- MANNOSIDOSIS REMARK 1 REF EUR.J.BIOCHEM. V. 246 410 1997 REMARK 1 REFN ISSN 0014-2956 REMARK 1 PMID 9208932 REMARK 1 DOI 10.1111/J.1432-1033.1997.00410.X REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 3231490.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.4 REMARK 3 NUMBER OF REFLECTIONS : 60106 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.257 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3071 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 8137 REMARK 3 BIN R VALUE (WORKING SET) : 0.3640 REMARK 3 BIN FREE R VALUE : 0.4060 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 463 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.019 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7124 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 222 REMARK 3 SOLVENT ATOMS : 39 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.70000 REMARK 3 B22 (A**2) : 2.70000 REMARK 3 B33 (A**2) : -5.40000 REMARK 3 B12 (A**2) : 2.71000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.41 REMARK 3 ESD FROM SIGMAA (A) : 0.53 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.49 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.65 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.110 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 5.120 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 7.950 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 6.990 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 9.900 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 32.95 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1O7D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-OCT-02. REMARK 100 THE DEPOSITION ID IS D_1290011195. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60071 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.0 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.54000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1HTY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN 9 MG/ML IN 20 MM TRIS-CL, PH REMARK 280 7.5, 150 MM NACL MIXED 1:1 WITH 100 MM TRIS-CL, PH 7.5, 50 % REMARK 280 SAT. (NH4)2SO4, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 194.01333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 388.02667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 291.02000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 485.03333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 97.00667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 194.01333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 388.02667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 485.03333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 291.02000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 97.00667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE MOLECULE IS A DIMER IN SOLUTION, BUT REMARK 300 THE CURRENTENTRY DESCRIBES A MONONER IN THE REMARK 300 ASYMMETRIC UNIT THATIS FORMED OF CHAINS A-E REMARK 300 RESULTING FROM PROTEOLYTICPROCESSING OF A SINGLE REMARK 300 GENE PRODUCT, AND HENCECLASSIFIED AS A PENTAMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ESSENTIAL IN THE CATABOLISM OF N-LINKED CARBOHYDRATES REMARK 400 DURING GLYCOPROTEIN TURNOVER. HYDROLYSES TERMINAL NON_REDUCING REMARK 400 ALPHA-D-MANNOSE RESIDUES IN ALPHA-D-MANNOSIDES. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 50 REMARK 465 GLN A 343 REMARK 465 ARG A 344 REMARK 465 ALA A 345 REMARK 465 ASN A 346 REMARK 465 GLY A 347 REMARK 465 ALA B 423 REMARK 465 ASN B 424 REMARK 465 VAL B 425 REMARK 465 GLY B 426 REMARK 465 PRO B 427 REMARK 465 TYR B 428 REMARK 465 GLY B 429 REMARK 465 SER B 430 REMARK 465 GLN C 586 REMARK 465 ARG C 587 REMARK 465 PRO C 588 REMARK 465 GLN C 589 REMARK 465 LYS C 590 REMARK 465 SER C 591 REMARK 465 TRP C 592 REMARK 465 SER C 593 REMARK 465 GLU D 630 REMARK 465 GLN D 631 REMARK 465 ASN D 632 REMARK 465 GLY D 876 REMARK 465 ALA D 877 REMARK 465 ARG D 878 REMARK 465 TYR D 879 REMARK 465 ARG D 880 REMARK 465 LEU D 881 REMARK 465 GLU D 882 REMARK 465 LYS D 883 REMARK 465 ALA D 884 REMARK 465 THR E 974 REMARK 465 GLY E 975 REMARK 465 PRO E 976 REMARK 465 THR E 977 REMARK 465 PRO E 978 REMARK 465 HIS E 979 REMARK 465 PRO E 980 REMARK 465 SER E 981 REMARK 465 PRO E 982 REMARK 465 SER E 983 REMARK 465 ARG E 984 REMARK 465 PRO E 985 REMARK 465 VAL E 986 REMARK 465 SER E 987 REMARK 465 GLU E 1008 REMARK 465 ASP E 1009 REMARK 465 GLY E 1010 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 53 CG CD CE NZ REMARK 470 GLU A 265 CG CD OE1 OE2 REMARK 470 CYS A 273 SG REMARK 470 ARG A 294 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 323 CG CD OE1 OE2 REMARK 470 GLN A 342 CA C O CB CG CD OE1 REMARK 470 GLN A 342 NE2 REMARK 470 LYS B 374 CG CD CE NZ REMARK 470 ALA B 422 CA C O CB REMARK 470 ARG C 463 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 470 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 487 CG CD CE NZ REMARK 470 CYS C 493 SG REMARK 470 LYS C 543 CG CD CE NZ REMARK 470 ASN C 585 CA C O CB CG OD1 ND2 REMARK 470 ARG D 603 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 677 CG CD OE1 NE2 REMARK 470 ARG D 708 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 831 CG CD CE NZ REMARK 470 GLY D 875 CA C O REMARK 470 ARG E 893 CG CD NE CZ NH1 NH2 REMARK 470 ARG E 894 CG CD NE CZ NH1 NH2 REMARK 470 GLU E1007 CA C O CB CG CD OE1 REMARK 470 GLU E1007 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 141 NH2 ARG A 144 2.11 REMARK 500 N ASN C 585 O HOH C 2003 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 248 C - N - CA ANGL. DEV. = 16.2 DEGREES REMARK 500 PRO A 248 C - N - CD ANGL. DEV. = -28.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 77 -67.60 -173.13 REMARK 500 ALA A 95 124.29 -172.07 REMARK 500 PRO A 258 -70.17 -60.69 REMARK 500 ASN A 259 58.91 -110.76 REMARK 500 MET A 260 -91.30 63.63 REMARK 500 TYR A 261 14.50 -155.52 REMARK 500 GLU A 265 109.01 -50.63 REMARK 500 ASP A 281 109.61 -45.06 REMARK 500 SER A 318 -155.83 -139.37 REMARK 500 ASP A 319 109.69 -54.83 REMARK 500 ASN B 367 70.27 44.06 REMARK 500 TRP B 388 53.84 -92.76 REMARK 500 PRO B 421 17.85 -52.73 REMARK 500 HIS C 445 171.67 -50.47 REMARK 500 ALA C 448 -83.18 -89.35 REMARK 500 ILE C 498 25.24 -140.51 REMARK 500 SER C 499 43.74 71.16 REMARK 500 CYS C 501 97.04 -164.53 REMARK 500 LYS C 532 58.35 -69.00 REMARK 500 ASP C 548 123.56 -172.61 REMARK 500 SER C 554 -29.64 79.60 REMARK 500 SER D 653 135.11 175.07 REMARK 500 SER D 673 142.00 178.11 REMARK 500 PRO D 718 107.29 -57.55 REMARK 500 ARG D 750 -104.63 -121.21 REMARK 500 SER D 780 -40.26 -141.31 REMARK 500 SER D 802 168.74 177.02 REMARK 500 GLU D 810 139.71 -174.29 REMARK 500 LEU D 829 77.40 -64.19 REMARK 500 LEU D 865 61.77 -100.16 REMARK 500 ARG E 886 84.71 -154.70 REMARK 500 GLN E 920 8.86 -54.12 REMARK 500 ASN E 930 51.23 39.26 REMARK 500 ASN E 941 0.81 80.68 REMARK 500 LEU E 962 -39.71 -36.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 3 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRS A 2 O3 REMARK 620 2 HIS A 72 NE2 112.4 REMARK 620 3 ASP A 74 OD1 100.7 87.5 REMARK 620 4 ASP A 196 OD2 68.8 85.9 164.0 REMARK 620 5 HIS C 446 NE2 145.7 101.2 73.4 122.1 REMARK 620 N 1 2 3 4 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. DBREF 1O7D A 50 347 UNP Q29451 MA2B1_BOVIN 51 348 DBREF 1O7D B 347 430 UNP Q29451 MA2B1_BOVIN 349 432 DBREF 1O7D C 431 593 UNP Q29451 MA2B1_BOVIN 433 591 DBREF 1O7D D 603 884 UNP Q29451 MA2B1_BOVIN 592 873 DBREF 1O7D E 885 1010 UNP Q29451 MA2B1_BOVIN 874 999 SEQRES 1 A 298 ALA GLY TYR LYS THR CYS PRO LYS VAL LYS PRO ASP MET SEQRES 2 A 298 LEU ASN VAL HIS LEU VAL PRO HIS THR HIS ASP ASP VAL SEQRES 3 A 298 GLY TRP LEU LYS THR VAL ASP GLN TYR PHE TYR GLY ILE SEQRES 4 A 298 TYR ASN ASN ILE GLN PRO ALA GLY VAL GLN TYR ILE LEU SEQRES 5 A 298 ASP SER VAL ILE SER SER LEU LEU ALA ASN PRO THR ARG SEQRES 6 A 298 ARG PHE ILE TYR VAL GLU ILE ALA PHE PHE SER ARG TRP SEQRES 7 A 298 TRP ARG GLN GLN THR ASN ALA THR GLN LYS ILE VAL ARG SEQRES 8 A 298 GLU LEU VAL ARG GLN GLY ARG LEU GLU PHE ALA ASN GLY SEQRES 9 A 298 GLY TRP VAL MET ASN ASP GLU ALA THR THR HIS TYR GLY SEQRES 10 A 298 ALA ILE ILE ASP GLN MET THR LEU GLY LEU ARG PHE LEU SEQRES 11 A 298 GLU GLU THR PHE GLY SER ASP GLY ARG PRO ARG VAL ALA SEQRES 12 A 298 TRP HIS ILE ASP PRO PHE GLY HIS SER ARG GLU GLN ALA SEQRES 13 A 298 SER LEU PHE ALA GLN MET GLY PHE ASP GLY PHE PHE PHE SEQRES 14 A 298 GLY ARG LEU ASP TYR GLN ASP LYS LYS VAL ARG LYS LYS SEQRES 15 A 298 THR LEU GLN MET GLU GLN VAL TRP ARG ALA SER THR SER SEQRES 16 A 298 LEU LYS PRO PRO THR ALA ASP LEU PHE THR SER VAL LEU SEQRES 17 A 298 PRO ASN MET TYR ASN PRO PRO GLU GLY LEU CYS TRP ASP SEQRES 18 A 298 MET LEU CYS ALA ASP LYS PRO VAL VAL GLU ASP THR ARG SEQRES 19 A 298 SER PRO GLU TYR ASN ALA LYS GLU LEU VAL ARG TYR PHE SEQRES 20 A 298 LEU LYS LEU ALA THR ASP GLN GLY LYS LEU TYR ARG THR SEQRES 21 A 298 LYS HIS THR VAL MET THR MET GLY SER ASP PHE GLN TYR SEQRES 22 A 298 GLU ASN ALA ASN THR TRP PHE LYS ASN LEU ASP LYS LEU SEQRES 23 A 298 ILE GLN LEU VAL ASN ALA GLN GLN ARG ALA ASN GLY SEQRES 1 B 84 ILE ARG VAL ASN VAL LEU TYR SER THR PRO ALA CYS TYR SEQRES 2 B 84 LEU TRP GLU LEU ASN LYS ALA ASN LEU SER TRP SER VAL SEQRES 3 B 84 LYS LYS ASP ASP PHE PHE PRO TYR ALA ASP GLY PRO TYR SEQRES 4 B 84 MET PHE TRP THR GLY TYR PHE SER SER ARG PRO ALA LEU SEQRES 5 B 84 LYS ARG TYR GLU ARG LEU SER TYR ASN PHE LEU GLN VAL SEQRES 6 B 84 CYS ASN GLN LEU GLU ALA LEU ALA GLY PRO ALA ALA ASN SEQRES 7 B 84 VAL GLY PRO TYR GLY SER SEQRES 1 C 159 GLY ASP SER ALA PRO LEU ASN GLU ALA MET ALA VAL LEU SEQRES 2 C 159 GLN HIS HIS ASP ALA VAL SER GLY THR SER ARG GLN HIS SEQRES 3 C 159 VAL ALA ASN ASP TYR ALA ARG GLN LEU SER GLU GLY TRP SEQRES 4 C 159 ARG PRO CYS GLU VAL LEU MET SER ASN ALA LEU ALA HIS SEQRES 5 C 159 LEU SER GLY LEU LYS GLU ASP PHE ALA PHE CYS ARG LYS SEQRES 6 C 159 LEU ASN ILE SER ILE CYS PRO LEU THR GLN THR ALA GLU SEQRES 7 C 159 ARG PHE GLN VAL ILE VAL TYR ASN PRO LEU GLY ARG LYS SEQRES 8 C 159 VAL ASP TRP MET VAL ARG LEU PRO VAL SER LYS HIS VAL SEQRES 9 C 159 TYR LEU VAL LYS ASP PRO GLY GLY LYS ILE VAL PRO SER SEQRES 10 C 159 ASP VAL VAL THR ILE PRO SER SER ASP SER GLN GLU LEU SEQRES 11 C 159 LEU PHE SER ALA LEU VAL PRO ALA VAL GLY PHE SER ILE SEQRES 12 C 159 TYR SER VAL SER GLN MET PRO ASN GLN ARG PRO GLN LYS SEQRES 13 C 159 SER TRP SER SEQRES 1 D 282 ARG ASP LEU VAL ILE GLN ASN GLU TYR LEU ARG ALA ARG SEQRES 2 D 282 PHE ASP PRO ASN THR GLY LEU LEU MET GLU LEU GLU ASN SEQRES 3 D 282 LEU GLU GLN ASN LEU LEU LEU PRO VAL ARG GLN ALA PHE SEQRES 4 D 282 TYR TRP TYR ASN ALA SER THR GLY ASN ASN LEU SER SER SEQRES 5 D 282 GLN ALA SER GLY ALA TYR ILE PHE ARG PRO ASN GLN ASN SEQRES 6 D 282 LYS PRO LEU PHE VAL SER HIS TRP ALA GLN THR HIS LEU SEQRES 7 D 282 VAL LYS ALA SER LEU VAL GLN GLU VAL HIS GLN ASN PHE SEQRES 8 D 282 SER ALA TRP CYS SER GLN VAL VAL ARG LEU TYR PRO ARG SEQRES 9 D 282 GLN ARG HIS LEU GLU LEU GLU TRP THR VAL GLY PRO ILE SEQRES 10 D 282 PRO VAL GLY ASP GLY TRP GLY LYS GLU VAL ILE SER ARG SEQRES 11 D 282 PHE ASP THR ALA LEU ALA THR ARG GLY LEU PHE TYR THR SEQRES 12 D 282 ASP SER ASN GLY ARG GLU ILE LEU GLU ARG ARG ARG ASN SEQRES 13 D 282 TYR ARG PRO THR TRP LYS LEU ASN GLN THR GLU PRO VAL SEQRES 14 D 282 ALA GLY ASN TYR TYR PRO VAL ASN SER ARG ILE TYR ILE SEQRES 15 D 282 THR ASP GLY ASN MET GLN LEU THR VAL LEU THR ASP ARG SEQRES 16 D 282 SER GLN GLY GLY SER SER LEU ARG ASP GLY SER LEU GLU SEQRES 17 D 282 LEU MET VAL HIS ARG ARG LEU LEU LYS ASP ASP ALA ARG SEQRES 18 D 282 GLY VAL GLY GLU PRO LEU ASN LYS GLU GLY SER GLY LEU SEQRES 19 D 282 TRP VAL ARG GLY ARG HIS LEU VAL LEU LEU ASP LYS LYS SEQRES 20 D 282 GLU THR ALA ALA ALA ARG HIS ARG LEU GLN ALA GLU MET SEQRES 21 D 282 GLU VAL LEU ALA PRO GLN VAL VAL LEU ALA GLN GLY GLY SEQRES 22 D 282 GLY ALA ARG TYR ARG LEU GLU LYS ALA SEQRES 1 E 126 PRO ARG THR GLN PHE SER GLY LEU ARG ARG GLU LEU PRO SEQRES 2 E 126 PRO SER VAL ARG LEU LEU THR LEU ALA ARG TRP GLY PRO SEQRES 3 E 126 GLU THR LEU LEU LEU ARG LEU GLU HIS GLN PHE ALA VAL SEQRES 4 E 126 GLY GLU ASP SER GLY ARG ASN LEU SER SER PRO VAL THR SEQRES 5 E 126 LEU ASP LEU THR ASN LEU PHE SER ALA PHE THR ILE THR SEQRES 6 E 126 ASN LEU ARG GLU THR THR LEU ALA ALA ASN GLN LEU LEU SEQRES 7 E 126 ALA TYR ALA SER ARG LEU GLN TRP THR THR ASP THR GLY SEQRES 8 E 126 PRO THR PRO HIS PRO SER PRO SER ARG PRO VAL SER ALA SEQRES 9 E 126 THR ILE THR LEU GLN PRO MET GLU ILE ARG THR PHE LEU SEQRES 10 E 126 ALA SER VAL GLN TRP GLU GLU ASP GLY MODRES 1O7D ASN A 133 ASN GLYCOSYLATION SITE MODRES 1O7D ASN C 497 ASN GLYCOSYLATION SITE MODRES 1O7D ASN D 645 ASN GLYCOSYLATION SITE MODRES 1O7D ASN D 692 ASN GLYCOSYLATION SITE MODRES 1O7D ASN D 766 ASN GLYCOSYLATION SITE HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET MAN F 5 11 HET MAN F 6 11 HET MAN F 7 11 HET MAN F 8 11 HET MAN F 9 11 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET NAG I 1 14 HET NAG I 2 14 HET NAG A 1 14 HET TRS A 2 8 HET ZN A 3 1 HET SO4 A3001 5 HET SO4 E3002 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETSYN TRS TRIS BUFFER FORMUL 6 NAG 9(C8 H15 N O6) FORMUL 6 BMA C6 H12 O6 FORMUL 6 MAN 6(C6 H12 O6) FORMUL 11 TRS C4 H12 N O3 1+ FORMUL 12 ZN ZN 2+ FORMUL 13 SO4 2(O4 S 2-) FORMUL 15 HOH *39(H2 O) HELIX 1 1 THR A 80 GLY A 87 1 8 HELIX 2 2 GLY A 96 ASN A 111 1 16 HELIX 3 3 GLU A 120 GLN A 130 1 11 HELIX 4 4 THR A 132 GLN A 145 1 14 HELIX 5 5 HIS A 164 GLY A 184 1 21 HELIX 6 6 SER A 185 ARG A 188 5 4 HELIX 7 7 SER A 201 MET A 211 1 11 HELIX 8 8 ASP A 222 THR A 232 1 11 HELIX 9 9 ASN A 288 LYS A 305 1 18 HELIX 10 10 ASN A 324 ALA A 341 1 18 HELIX 11 11 THR B 355 ALA B 366 1 12 HELIX 12 12 THR B 389 SER B 393 5 5 HELIX 13 13 ARG B 395 ALA B 419 1 25 HELIX 14 14 SER C 433 LEU C 443 1 11 HELIX 15 15 ARG C 454 GLY C 485 1 32 HELIX 16 16 LYS C 495 SER C 499 5 5 HELIX 17 17 CYS C 501 ALA C 507 1 7 HELIX 18 18 VAL D 771 TYR D 775 5 5 HELIX 19 19 GLU D 832 TRP D 837 5 6 HELIX 20 20 LYS D 849 LEU D 865 1 17 HELIX 21 21 LEU E 962 ALA E 965 5 4 SHEET 1 AA 3 HIS A 311 MET A 316 0 SHEET 2 AA 3 LEU A 63 PRO A 69 1 O ASN A 64 N THR A 312 SHEET 3 AA 3 VAL B 349 TYR B 353 1 O ASN B 350 N VAL A 65 SHEET 1 AB 2 PHE A 116 TYR A 118 0 SHEET 2 AB 2 LEU A 148 PHE A 150 1 O GLU A 149 N TYR A 118 SHEET 1 AC 5 VAL A 191 HIS A 194 0 SHEET 2 AC 5 GLY A 215 PHE A 218 1 O GLY A 215 N ALA A 192 SHEET 3 AC 5 ASP A 251 VAL A 256 1 O PHE A 253 N PHE A 216 SHEET 4 AC 5 GLU A 236 ARG A 240 -1 O GLN A 237 N THR A 254 SHEET 5 AC 5 VAL B 372 LYS B 373 1 O LYS B 373 N ARG A 240 SHEET 1 CA 6 PHE C 490 ALA C 491 0 SHEET 2 CA 6 GLN D 868 GLN D 873 -1 O LEU D 871 N ALA C 491 SHEET 3 CA 6 ARG C 509 ASN C 516 -1 O GLN C 511 N ALA D 872 SHEET 4 CA 6 GLY C 574 GLN C 582 -1 O GLY C 574 N ASN C 516 SHEET 5 CA 6 TYR C 535 LYS C 538 -1 O LEU C 536 N SER C 581 SHEET 6 CA 6 ILE C 544 VAL C 545 -1 O VAL C 545 N VAL C 537 SHEET 1 CB 5 PHE C 490 ALA C 491 0 SHEET 2 CB 5 GLN D 868 GLN D 873 -1 O LEU D 871 N ALA C 491 SHEET 3 CB 5 ARG C 509 ASN C 516 -1 O GLN C 511 N ALA D 872 SHEET 4 CB 5 GLY C 574 GLN C 582 -1 O GLY C 574 N ASN C 516 SHEET 5 CB 5 GLN E 888 PHE E 889 -1 O PHE E 889 N PHE C 575 SHEET 1 CC 3 VAL C 522 VAL C 530 0 SHEET 2 CC 3 GLN C 558 VAL C 570 -1 O GLN C 558 N VAL C 530 SHEET 3 CC 3 ASP C 548 THR C 551 -1 O ASP C 548 N LEU C 565 SHEET 1 DA 4 VAL D 606 GLN D 608 0 SHEET 2 DA 4 LEU D 612 PHE D 616 -1 O ALA D 614 N ILE D 607 SHEET 3 DA 4 LEU D 623 ASN D 628 -1 N MET D 624 O ARG D 615 SHEET 4 DA 4 LEU D 634 PRO D 636 -1 O LEU D 635 N LEU D 626 SHEET 1 DB 4 LEU D 670 PHE D 671 0 SHEET 2 DB 4 ARG D 638 ASN D 645 -1 O TRP D 643 N LEU D 670 SHEET 3 DB 4 LYS D 727 ASP D 734 -1 O GLU D 728 N TYR D 644 SHEET 4 DB 4 SER D 808 ARG D 816 -1 O LEU D 809 N PHE D 733 SHEET 1 DC 9 GLN D 677 LYS D 682 0 SHEET 2 DC 9 GLN D 687 SER D 694 -1 O GLU D 688 N VAL D 681 SHEET 3 DC 9 CYS D 697 LEU D 703 -1 O CYS D 697 N SER D 694 SHEET 4 DC 9 LEU D 710 VAL D 716 -1 O GLU D 711 N ARG D 702 SHEET 5 DC 9 VAL D 838 LYS D 848 -1 O VAL D 838 N VAL D 716 SHEET 6 DC 9 MET D 789 THR D 795 -1 O GLN D 790 N ASP D 847 SHEET 7 DC 9 ARG D 781 THR D 785 -1 O ILE D 782 N VAL D 793 SHEET 8 DC 9 LEU D 742 ASP D 746 -1 O TYR D 744 N TYR D 783 SHEET 9 DC 9 ILE D 752 ARG D 756 -1 O LEU D 753 N THR D 745 SHEET 1 DD 2 TYR D 776 VAL D 778 0 SHEET 2 DD 2 GLN D 799 GLY D 801 -1 O GLN D 799 N VAL D 778 SHEET 1 EA 4 ARG E 901 GLY E 909 0 SHEET 2 EA 4 THR E 912 GLU E 918 -1 O THR E 912 N GLY E 909 SHEET 3 EA 4 ILE E 997 GLN E1005 -1 O ARG E 998 N LEU E 917 SHEET 4 EA 4 THR E 947 THR E 954 -1 O THR E 947 N GLN E1005 SHEET 1 EB 2 VAL E 935 ASP E 938 0 SHEET 2 EB 2 THR E 989 LEU E 992 -1 O ILE E 990 N LEU E 937 SSBOND 1 CYS A 55 CYS B 358 1555 1555 2.05 SSBOND 2 CYS B 412 CYS C 472 1555 1555 2.07 LINK C1 NAG A 1 ND2 ASN A 133 1555 1555 1.45 LINK ND2 ASN C 497 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN D 645 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN D 692 C1 NAG H 1 1555 1555 1.45 LINK ND2 ASN D 766 C1 NAG I 1 1555 1555 1.46 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.38 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.37 LINK O6 BMA F 3 C1 MAN F 4 1555 1555 1.39 LINK O3 BMA F 3 C1 MAN F 8 1555 1555 1.39 LINK O6 MAN F 4 C1 MAN F 5 1555 1555 1.41 LINK O3 MAN F 4 C1 MAN F 7 1555 1555 1.40 LINK O2 MAN F 5 C1 MAN F 6 1555 1555 1.39 LINK O2 MAN F 8 C1 MAN F 9 1555 1555 1.48 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.40 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.39 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.40 LINK O3 TRS A 2 ZN ZN A 3 1555 1555 2.26 LINK ZN ZN A 3 NE2 HIS A 72 1555 1555 2.12 LINK ZN ZN A 3 OD1 ASP A 74 1555 1555 2.09 LINK ZN ZN A 3 OD2 ASP A 196 1555 1555 2.66 LINK ZN ZN A 3 NE2 HIS C 446 1555 1555 2.24 CISPEP 1 PRO A 247 PRO A 248 0 2.99 CISPEP 2 PHE B 378 PRO B 379 0 -0.67 CRYST1 117.880 117.880 582.040 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008483 0.004898 0.000000 0.00000 SCALE2 0.000000 0.009795 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001718 0.00000