PDB Short entry for 1OE4
HEADER    HYDROLASE/DNA                           19-MAR-03   1OE4              
TITLE     XENOPUS SMUG1, AN ANTI-MUTATOR URACIL-DNA GLYCOSYLASE                 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA          
COMPND   3  GLYCOSYLASE;                                                        
COMPND   4 CHAIN: A, B;                                                         
COMPND   5 FRAGMENT: RESIDUES 1-247;                                            
COMPND   6 SYNONYM: SMUG1;                                                      
COMPND   7 EC: 3.2.2.-;                                                         
COMPND   8 ENGINEERED: YES;                                                     
COMPND   9 MOL_ID: 2;                                                           
COMPND  10 MOLECULE: 5'-D(*CP*CP*CP*GP*TP*GP*AP*GP*TP*CP*CP*G)-3';              
COMPND  11 CHAIN: E;                                                            
COMPND  12 MOL_ID: 3;                                                           
COMPND  13 MOLECULE: 5'-D(*CP*GP*GP*AP*CP*TP*3DR*AP*CP*GP*GP*G)-3';             
COMPND  14 CHAIN: F                                                             
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS;                                 
SOURCE   3 ORGANISM_COMMON: AFRICAN CLAWED FROG;                                
SOURCE   4 ORGANISM_TAXID: 8355;                                                
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 MOL_ID: 2;                                                           
SOURCE   8 SYNTHETIC: YES;                                                      
SOURCE   9 MOL_ID: 3;                                                           
SOURCE  10 SYNTHETIC: YES                                                       
KEYWDS    HYDROLASE-DNA COMPLEX, HYDROLASE, DNA GLYCOSYLASE, SINGLE STRANDED    
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    J.E.A.WIBLEY,L.H.PEARL                                                
REVDAT   3   17-JUL-13 1OE4    1       HEADER COMPND KEYWDS JRNL                
REVDAT   3 2                           REMARK VERSN  DBREF  SEQRES              
REVDAT   3 3                           HETSYN FORMUL LINK   SITE                
REVDAT   3 4                           SCALE1 ATOM   HETATM TER                 
REVDAT   3 5                           CONECT MASTER                            
REVDAT   2   24-FEB-09 1OE4    1       VERSN                                    
REVDAT   1   11-JUL-03 1OE4    0                                                
JRNL        AUTH   J.E.A.WIBLEY,T.R.WATERS,K.HAUSHALTER,G.L.VERDINE,L.H.PEARL   
JRNL        TITL   STRUCTURE AND SPECIFICITY OF THE VERTEBRATE ANTI-MUTATOR     
JRNL        TITL 2 URACIL-DNA GLYCOSYLASE SMUG1                                 
JRNL        REF    MOL.CELL                      V.  11  1647 2003              
JRNL        REFN                   ISSN 1097-2765                               
JRNL        PMID   12820976                                                     
JRNL        DOI    10.1016/S1097-2765(03)00235-1                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.0  ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.1.24                                        
REMARK   3   AUTHORS     : MURSHUDOV,VAGIN,DODSON                               
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 67.42                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 100.0                          
REMARK   3   NUMBER OF REFLECTIONS             : 46033                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.179                           
REMARK   3   R VALUE            (WORKING SET) : 0.177                           
REMARK   3   FREE R VALUE                     : 0.216                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.100                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2451                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.00                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.05                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 3399                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2110                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 154                          
REMARK   3   BIN FREE R VALUE                    : 0.2520                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 3891                                    
REMARK   3   NUCLEIC ACID ATOMS       : 467                                     
REMARK   3   HETEROGEN ATOMS          : 51                                      
REMARK   3   SOLVENT ATOMS            : 673                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 21.24                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -0.01000                                             
REMARK   3    B22 (A**2) : 0.01000                                              
REMARK   3    B33 (A**2) : -0.02000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : -0.02000                                             
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.160         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.146         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.095         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.357         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.950                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.926                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  4562 ; 0.009 ; 0.021       
REMARK   3   BOND LENGTHS OTHERS               (A):  3883 ; 0.002 ; 0.020       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  6273 ; 1.303 ; 2.099       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  9134 ; 1.144 ; 3.000       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   490 ; 5.982 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   657 ; 0.070 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  4659 ; 0.005 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):   795 ; 0.003 ; 0.020       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):   895 ; 0.195 ; 0.200       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  4413 ; 0.230 ; 0.200       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  2395 ; 0.082 ; 0.200       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):   478 ; 0.164 ; 0.200       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):    16 ; 0.118 ; 0.200       
REMARK   3   SYMMETRY VDW OTHERS               (A):    87 ; 0.265 ; 0.200       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):    47 ; 0.146 ; 0.200       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  2452 ; 0.701 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  3974 ; 1.371 ; 2.000       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  2110 ; 1.940 ; 3.000       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  2297 ; 3.251 ; 4.500       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : BABINET MODEL WITH MASK                              
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.40                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE          
REMARK   3  RIDING POSITIONS                                                    
REMARK   4                                                                      
REMARK   4 1OE4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-MAR-03.                  
REMARK 100 THE PDBE ID CODE IS EBI-12401.                                       
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 15-OCT-01                          
REMARK 200  TEMPERATURE           (KELVIN) : 100.0                              
REMARK 200  PH                             : 7.50                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ESRF                               
REMARK 200  BEAMLINE                       : ID14-4                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9792                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC                               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : MOSFLM                             
REMARK 200  DATA SCALING SOFTWARE          : CCP4 (SCALA)                       
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 48465                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.000                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.9                               
REMARK 200  DATA REDUNDANCY                : 3.700                              
REMARK 200  R MERGE                    (I) : 0.08700                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 4.7000                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.11                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY IN SHELL       : 3.70                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.28000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 1.300                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS                        
REMARK 200 SOFTWARE USED: SOLVE/RESOLVE                                         
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 45                                        
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: NULL                                     
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       60.84050            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       42.96800            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       60.84050            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       42.96800            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC                        
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC                 
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F                            
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A2281  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH A2305  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH A2004  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     THR A    35                                                      
REMARK 465     GLY A   281                                                      
REMARK 465     THR B    35                                                      
REMARK 465     GLY B   281                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    PRO A   143     O    HOH A  2145              2.18            
REMARK 500   OE1  GLU B    36     O    HOH B  2005              1.24            
REMARK 500   OD2  ASP B   117     O3   GOL B  1281              2.18            
REMARK 500   OP2   DC E   291     O    HOH E  2029              2.20            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   O    HOH E  2004     O    HOH E  2004     2656     1.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    GLU B  36   C     GLU B  36   O       0.151                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    GLU B  36   CA  -  C   -  N   ANGL. DEV. =  15.3 DEGREES          
REMARK 500    ASP B  60   CB  -  CG  -  OD2 ANGL. DEV. =   5.7 DEGREES          
REMARK 500     DC E 281   O4' -  C1' -  N1  ANGL. DEV. =   3.6 DEGREES          
REMARK 500     DC E 282   O4' -  C1' -  N1  ANGL. DEV. =   4.6 DEGREES          
REMARK 500     DG E 286   O4' -  C1' -  N9  ANGL. DEV. =   5.0 DEGREES          
REMARK 500     DT E 289   C1' -  O4' -  C4' ANGL. DEV. =  -6.2 DEGREES          
REMARK 500     DG F 294   O4' -  C1' -  N9  ANGL. DEV. =  -4.3 DEGREES          
REMARK 500     DG F 295   O4' -  C1' -  N9  ANGL. DEV. =  -4.3 DEGREES          
REMARK 500     DC F 297   O4' -  C1' -  N1  ANGL. DEV. =   2.7 DEGREES          
REMARK 500     DT F 298   O4' -  C1' -  N1  ANGL. DEV. =   3.4 DEGREES          
REMARK 500     DC F 301   O4' -  C1' -  N1  ANGL. DEV. =   3.6 DEGREES          
REMARK 500     DG F 304   O4' -  C1' -  N9  ANGL. DEV. =   1.9 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASP A  60     -103.10     91.68                                   
REMARK 500    VAL A  70      -67.51    -97.34                                   
REMARK 500    SER A 126     -143.50    -98.62                                   
REMARK 500    ASP B  60      -89.89     94.05                                   
REMARK 500    SER B 126     -149.73    -98.53                                   
REMARK 500    LYS B 195      -39.60    -39.45                                   
REMARK 500    LYS B 246     -169.39   -127.14                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 GLN B   59     ASP B   60                  143.62                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1281                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1282                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1283                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1284                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1281                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1282                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA B1283                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1OE5   RELATED DB: PDB                                   
REMARK 900  XENOPUS SMUG1, AN ANTI-MUTATOR URACIL-DNA                           
REMARK 900  GLYCOSYLASE                                                         
REMARK 900 RELATED ID: 1OE6   RELATED DB: PDB                                   
REMARK 900  XENOPUS SMUG1, AN ANTI-MUTATOR URACIL-DNA                           
REMARK 900  GLYCOSYLASE                                                         
REMARK 999                                                                      
REMARK 999 SEQUENCE                                                             
REMARK 999  RESIDUE 3DR IN CHAIN F IS THE RESULT OF DEGLYCOSYLATION             
REMARK 999  OF DEOXYURACIL                                                      
DBREF  1OE4 A   35   281  UNP    Q9YGN6   Q9YGN6           1    247             
DBREF  1OE4 B   35   281  UNP    Q9YGN6   Q9YGN6           1    247             
DBREF  1OE4 E  281   292  PDB    1OE4     1OE4           281    292             
DBREF  1OE4 F  293   304  PDB    1OE4     1OE4           293    304             
SEQRES   1 A  247  THR GLU SER PRO ALA ASP SER PHE LEU LYS VAL GLU LEU          
SEQRES   2 A  247  GLU LEU ASN LEU LYS LEU SER ASN LEU VAL PHE GLN ASP          
SEQRES   3 A  247  PRO VAL GLN TYR VAL TYR ASN PRO LEU VAL TYR ALA TRP          
SEQRES   4 A  247  ALA PRO HIS GLU ASN TYR VAL GLN THR TYR CYS LYS SER          
SEQRES   5 A  247  LYS LYS GLU VAL LEU PHE LEU GLY MET ASN PRO GLY PRO          
SEQRES   6 A  247  PHE GLY MET ALA GLN THR GLY VAL PRO PHE GLY GLU VAL          
SEQRES   7 A  247  ASN HIS VAL ARG ASP TRP LEU GLN ILE GLU GLY PRO VAL          
SEQRES   8 A  247  SER LYS PRO GLU VAL GLU HIS PRO LYS ARG ARG ILE ARG          
SEQRES   9 A  247  GLY PHE GLU CYS PRO GLN SER GLU VAL SER GLY ALA ARG          
SEQRES  10 A  247  PHE TRP SER LEU PHE LYS SER LEU CYS GLY GLN PRO GLU          
SEQRES  11 A  247  THR PHE PHE LYS HIS CYS PHE VAL HIS ASN HIS CYS PRO          
SEQRES  12 A  247  LEU ILE PHE MET ASN HIS SER GLY LYS ASN LEU THR PRO          
SEQRES  13 A  247  THR ASP LEU PRO LYS ALA GLN ARG ASP THR LEU LEU GLU          
SEQRES  14 A  247  ILE CYS ASP GLU ALA LEU CYS GLN ALA VAL ARG VAL LEU          
SEQRES  15 A  247  GLY VAL LYS LEU VAL ILE GLY VAL GLY ARG PHE SER GLU          
SEQRES  16 A  247  GLN ARG ALA ARG LYS ALA LEU MET ALA GLU GLY ILE ASP          
SEQRES  17 A  247  VAL THR VAL LYS GLY ILE MET HIS PRO SER PRO ARG ASN          
SEQRES  18 A  247  PRO GLN ALA ASN LYS GLY TRP GLU GLY ILE VAL ARG GLY          
SEQRES  19 A  247  GLN LEU LEU GLU LEU GLY VAL LEU SER LEU LEU THR GLY          
SEQRES   1 B  247  THR GLU SER PRO ALA ASP SER PHE LEU LYS VAL GLU LEU          
SEQRES   2 B  247  GLU LEU ASN LEU LYS LEU SER ASN LEU VAL PHE GLN ASP          
SEQRES   3 B  247  PRO VAL GLN TYR VAL TYR ASN PRO LEU VAL TYR ALA TRP          
SEQRES   4 B  247  ALA PRO HIS GLU ASN TYR VAL GLN THR TYR CYS LYS SER          
SEQRES   5 B  247  LYS LYS GLU VAL LEU PHE LEU GLY MET ASN PRO GLY PRO          
SEQRES   6 B  247  PHE GLY MET ALA GLN THR GLY VAL PRO PHE GLY GLU VAL          
SEQRES   7 B  247  ASN HIS VAL ARG ASP TRP LEU GLN ILE GLU GLY PRO VAL          
SEQRES   8 B  247  SER LYS PRO GLU VAL GLU HIS PRO LYS ARG ARG ILE ARG          
SEQRES   9 B  247  GLY PHE GLU CYS PRO GLN SER GLU VAL SER GLY ALA ARG          
SEQRES  10 B  247  PHE TRP SER LEU PHE LYS SER LEU CYS GLY GLN PRO GLU          
SEQRES  11 B  247  THR PHE PHE LYS HIS CYS PHE VAL HIS ASN HIS CYS PRO          
SEQRES  12 B  247  LEU ILE PHE MET ASN HIS SER GLY LYS ASN LEU THR PRO          
SEQRES  13 B  247  THR ASP LEU PRO LYS ALA GLN ARG ASP THR LEU LEU GLU          
SEQRES  14 B  247  ILE CYS ASP GLU ALA LEU CYS GLN ALA VAL ARG VAL LEU          
SEQRES  15 B  247  GLY VAL LYS LEU VAL ILE GLY VAL GLY ARG PHE SER GLU          
SEQRES  16 B  247  GLN ARG ALA ARG LYS ALA LEU MET ALA GLU GLY ILE ASP          
SEQRES  17 B  247  VAL THR VAL LYS GLY ILE MET HIS PRO SER PRO ARG ASN          
SEQRES  18 B  247  PRO GLN ALA ASN LYS GLY TRP GLU GLY ILE VAL ARG GLY          
SEQRES  19 B  247  GLN LEU LEU GLU LEU GLY VAL LEU SER LEU LEU THR GLY          
SEQRES   1 E   12   DC  DC  DC  DG  DT  DG  DA  DG  DT  DC  DC  DG              
SEQRES   1 F   12   DC  DG  DG  DA  DC  DT 3DR  DA  DC  DG  DG  DG              
HET    3DR  F 299      11                                                       
HET    GOL  A1281       6                                                       
HET    GOL  A1282       6                                                       
HET    GOL  A1283       6                                                       
HET    GOL  A1284       6                                                       
HET    GOL  B1281       6                                                       
HET    GOL  B1282       6                                                       
HET    IPA  B1283       4                                                       
HETNAM     3DR 1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE                           
HETNAM     GOL GLYCEROL                                                         
HETNAM     IPA ISOPROPYL ALCOHOL                                                
HETSYN     3DR ABASIC DIDEOXYRIBOSE                                             
HETSYN     GOL GLYCERIN; PROPANE-1,2,3-TRIOL                                    
HETSYN     IPA 2-PROPANOL                                                       
FORMUL   5  3DR    C5 H11 O6 P                                                  
FORMUL   6  GOL    6(C3 H8 O3)                                                  
FORMUL   7  IPA    C3 H8 O                                                      
FORMUL   8  HOH   *673(H2 O)                                                    
HELIX    1   1 PRO A   38  ASN A   55  1                                  18    
HELIX    2   2 ASN A   67  ALA A   72  1                                   6    
HELIX    3   3 ALA A   72  CYS A   84  1                                  13    
HELIX    4   4 GLY A  101  GLY A  106  1                                   6    
HELIX    5   5 GLU A  111  TRP A  118  1                                   8    
HELIX    6   6 ARG A  138  CYS A  142  5                                   5    
HELIX    7   7 GLU A  146  GLY A  161  1                                  16    
HELIX    8   8 GLN A  162  LYS A  168  1                                   7    
HELIX    9   9 THR A  189  LEU A  193  5                                   5    
HELIX   10  10 PRO A  194  GLY A  217  1                                  24    
HELIX   11  11 GLY A  225  GLU A  239  1                                  15    
HELIX   12  12 ASN A  255  ASN A  259  5                                   5    
HELIX   13  13 GLY A  261  GLY A  274  1                                  14    
HELIX   14  14 VAL A  275  THR A  280  1                                   6    
HELIX   15  15 PRO B   38  SER B   54  1                                  17    
HELIX   16  16 ASN B   67  ALA B   72  1                                   6    
HELIX   17  17 ALA B   72  CYS B   84  1                                  13    
HELIX   18  18 GLY B  101  GLY B  106  1                                   6    
HELIX   19  19 GLU B  111  TRP B  118  1                                   8    
HELIX   20  20 ARG B  138  CYS B  142  5                                   5    
HELIX   21  21 GLU B  146  GLY B  161  1                                  16    
HELIX   22  22 GLN B  162  LYS B  168  1                                   7    
HELIX   23  23 THR B  189  LEU B  193  5                                   5    
HELIX   24  24 PRO B  194  GLY B  217  1                                  24    
HELIX   25  25 GLY B  225  ALA B  238  1                                  14    
HELIX   26  26 ASN B  255  LYS B  260  5                                   6    
HELIX   27  27 GLY B  261  GLY B  274  1                                  14    
HELIX   28  28 VAL B  275  THR B  280  1                                   6    
SHEET    1  AA 3 TYR A  64  TYR A  66  0                                        
SHEET    2  AA 3 ILE A 179  MET A 181 -1  O  ILE A 179   N  TYR A  66           
SHEET    3  AA 3 ASN A 187  LEU A 188 -1  O  LEU A 188   N  PHE A 180           
SHEET    1  AB 4 CYS A 170  ASN A 174  0                                        
SHEET    2  AB 4 VAL A  90  GLY A  94  1  O  VAL A  90   N  PHE A 171           
SHEET    3  AB 4 LEU A 220  VAL A 224  1  O  LEU A 220   N  LEU A  91           
SHEET    4  AB 4 THR A 244  ILE A 248  1  O  THR A 244   N  VAL A 221           
SHEET    1  BA 3 TYR B  64  TYR B  66  0                                        
SHEET    2  BA 3 ILE B 179  MET B 181 -1  O  ILE B 179   N  TYR B  66           
SHEET    3  BA 3 ASN B 187  LEU B 188 -1  O  LEU B 188   N  PHE B 180           
SHEET    1  BB 4 CYS B 170  ASN B 174  0                                        
SHEET    2  BB 4 VAL B  90  GLY B  94  1  O  VAL B  90   N  PHE B 171           
SHEET    3  BB 4 LEU B 220  VAL B 224  1  O  LEU B 220   N  LEU B  91           
SHEET    4  BB 4 THR B 244  ILE B 248  1  O  THR B 244   N  VAL B 221           
LINK         P   3DR F 299                 O3'  DT F 298     1555   1555  1.60  
LINK         O3' 3DR F 299                 P    DA F 300     1555   1555  1.60  
SITE     1 AC1  7 ASN A 113  ASP A 117  HOH A2328  ALA B 150                    
SITE     2 AC1  7 ARG B 151  SER B 154  HOH B2214                               
SITE     1 AC2  7 TYR A  71  ALA A  72  TRP A  73  ALA A  74                    
SITE     2 AC2  7 PRO A 124  SER A 126  HOH A2330                               
SITE     1 AC3  7 TYR A  66  ASN A  67  VAL A  70  TYR A  71                    
SITE     2 AC3  7 PRO A 128  HOH A2331  HOH A2332                               
SITE     1 AC4  3 GLN A 230  HOH A2334  HOH A2335                               
SITE     1 AC5  7 HIS A 114  ALA A 150  ARG A 151  SER A 154                    
SITE     2 AC5  7 HIS B 114  ASP B 117  HOH B2268                               
SITE     1 AC6  4 PRO B 253  ARG B 254  HOH B2269   DG E 292                    
SITE     1 AC7  7 TYR B  66  ASN B  67  VAL B  70  TYR B  71                    
SITE     2 AC7  7 PRO B 128  GLU B 129  HOH B2096                               
CRYST1  121.681   85.936   79.126  90.00 118.36  90.00 C 1 2 1       8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.008218  0.000000  0.004436        0.00000                         
SCALE2      0.000000  0.011637  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.014362        0.00000