PDB Short entry for 1OOA
HEADER    TRANSCRIPTION/RNA                       03-MAR-03   1OOA              
TITLE     CRYSTAL STRUCTURE OF NF-KB(P50)2 COMPLEXED TO A HIGH-AFFINITY RNA     
TITLE    2 APTAMER                                                              
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: RNA APTAMER;                                               
COMPND   3 CHAIN: C, D;                                                         
COMPND   4 FRAGMENT: 29-NT RNA APTAMER;                                         
COMPND   5 ENGINEERED: YES;                                                     
COMPND   6 MOL_ID: 2;                                                           
COMPND   7 MOLECULE: NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT;                    
COMPND   8 CHAIN: A, B;                                                         
COMPND   9 SYNONYM: DNA-BINDING FACTOR KBF1, EBP- 1, NF-KAPPA-B1 P84/NF-KAPPA-B1
COMPND  10 P98, [CONTAINS: NUCLEAR FACTOR NF- KAPPA-B P50 SUBUNIT];             
COMPND  11 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES;                                                      
SOURCE   3 OTHER_DETAILS: SYNTHESIS OF THE RNA FRAGMENT FROM THE T7 PROMOTER IN 
SOURCE   4 VITRO TRANSCRIPTION;                                                 
SOURCE   5 MOL_ID: 2;                                                           
SOURCE   6 ORGANISM_SCIENTIFIC: MUS MUSCULUS;                                   
SOURCE   7 ORGANISM_COMMON: HOUSE MOUSE;                                        
SOURCE   8 ORGANISM_TAXID: 10090;                                               
SOURCE   9 GENE: NFKB1;                                                         
SOURCE  10 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21;                            
SOURCE  11 EXPRESSION_SYSTEM_TAXID: 511693;                                     
SOURCE  12 EXPRESSION_SYSTEM_STRAIN: BL21;                                      
SOURCE  13 EXPRESSION_SYSTEM_PLASMID: PET29B                                    
KEYWDS    PROTEIN-RNA COMPLEX, TRANSCRIPTION FACTOR NF-KB, TRANSCRIPTION-RNA    
KEYWDS   2 COMPLEX                                                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    D.B.HUANG,D.VU,L.A.CASSIDAY,J.M.ZIMMERMAN,L.J.MAHER III,G.GHOSH       
REVDAT   4   16-AUG-23 1OOA    1       SEQADV                                   
REVDAT   3   24-FEB-09 1OOA    1       VERSN                                    
REVDAT   2   25-JAN-05 1OOA    1       JRNL                                     
REVDAT   1   22-JUL-03 1OOA    0                                                
JRNL        AUTH   D.B.HUANG,D.VU,L.A.CASSIDAY,J.M.ZIMMERMAN,L.J.MAHER III,     
JRNL        AUTH 2 G.GHOSH                                                      
JRNL        TITL   CRYSTAL STRUCTURE OF NF-KAPPAB (P50)2 COMPLEXED TO A         
JRNL        TITL 2 HIGH-AFFINITY RNA APTAMER.                                   
JRNL        REF    PROC.NATL.ACAD.SCI.USA        V. 100  9268 2003              
JRNL        REFN                   ISSN 0027-8424                               
JRNL        PMID   12886018                                                     
JRNL        DOI    10.1073/PNAS.1632011100                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.45 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.0                                              
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : ENGH & HUBER                                    
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 28.99                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 2.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 86.7                           
REMARK   3   NUMBER OF REFLECTIONS             : 33180                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.208                           
REMARK   3   FREE R VALUE                     : 0.248                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 6.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1990                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : 0.006                           
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 6                            
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.45                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.60                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 59.80                        
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : 3592                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2920                       
REMARK   3   BIN FREE R VALUE                    : 0.3400                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : 6.00                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 230                          
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : 0.022                        
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 4914                                    
REMARK   3   NUCLEIC ACID ATOMS       : 1234                                    
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 294                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 32.90                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 54.00                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 4.68000                                              
REMARK   3    B22 (A**2) : -4.70000                                             
REMARK   3    B33 (A**2) : 0.02000                                              
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 5.09000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.31                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.33                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 5.00                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.37                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : 0.43                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.007                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.200                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 23.70                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 1.090                           
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : RESTRAINED                                
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : FLAT MODEL                                           
REMARK   3   KSOL        : 0.30                                                 
REMARK   3   BSOL        : 40.73                                                
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : PROTEIN_REP.PARAM                              
REMARK   3  PARAMETER FILE  2  : DNA-RNA_REP.PARAM                              
REMARK   3  PARAMETER FILE  3  : WATER_REP.PARAM                                
REMARK   3  PARAMETER FILE  4  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : PROTEIN.TOP                                    
REMARK   3  TOPOLOGY FILE  2   : DNA-RNA.TOP                                    
REMARK   3  TOPOLOGY FILE  3   : WATER.TOP                                      
REMARK   3  TOPOLOGY FILE  4   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1OOA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAR-03.                  
REMARK 100 THE DEPOSITION ID IS D_1000018497.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : NULL                               
REMARK 200  TEMPERATURE           (KELVIN) : 105                                
REMARK 200  PH                             : 6.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 2                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU RU200                       
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.5418                             
REMARK 200  MONOCHROMATOR                  : OSMIC MIRROR                       
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : MARRESEARCH                        
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 37890                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.450                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 30.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.9                               
REMARK 200  DATA REDUNDANCY                : 13.70                              
REMARK 200  R MERGE                    (I) : 0.05900                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 15.7000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.54                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.0                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.49000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 3.000                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: AMORE                                                 
REMARK 200 STARTING MODEL: PDB ENTRY 1NFK                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 57.56                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, ETHYLENE GLYCOL, AMMONIUM      
REMARK 280  SULFATE, PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K    
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       38.37650            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       75.52950            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       38.37650            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       75.52950            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, A                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     ILE A   351                                                      
REMARK 465     LYS A   352                                                      
REMARK 465     ASP A   353                                                      
REMARK 465     LYS A   354                                                      
REMARK 465     GLU A   355                                                      
REMARK 465     GLU A   356                                                      
REMARK 465     VAL A   357                                                      
REMARK 465     GLN A   358                                                      
REMARK 465     ARG A   359                                                      
REMARK 465     LYS A   360                                                      
REMARK 465     ARG A   361                                                      
REMARK 465     GLN A   362                                                      
REMARK 465     LYS A   363                                                      
REMARK 465     ILE B   351                                                      
REMARK 465     LYS B   352                                                      
REMARK 465     ASP B   353                                                      
REMARK 465     LYS B   354                                                      
REMARK 465     GLU B   355                                                      
REMARK 465     GLU B   356                                                      
REMARK 465     VAL B   357                                                      
REMARK 465     GLN B   358                                                      
REMARK 465     ARG B   359                                                      
REMARK 465     LYS B   360                                                      
REMARK 465     ARG B   361                                                      
REMARK 465     GLN B   362                                                      
REMARK 465     LYS B   363                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500      G C  22   N9  -  C1' -  C2' ANGL. DEV. =   8.2 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    SER A  63       70.53     39.35                                   
REMARK 500    VAL A 169      -60.22   -109.08                                   
REMARK 500    ASP A 172       46.89    -94.57                                   
REMARK 500    ALA A 178       82.30    -50.12                                   
REMARK 500    ASP A 183       73.65     70.43                                   
REMARK 500    GLU A 204       61.93   -154.82                                   
REMARK 500    PHE A 225       83.75    -68.77                                   
REMARK 500    ALA A 245      -73.09    -49.84                                   
REMARK 500    ASN A 288     -148.11    -72.65                                   
REMARK 500    VAL A 327     -162.84   -125.85                                   
REMARK 500    SER A 335      -79.27    -48.37                                   
REMARK 500    SER B  63       74.12     32.48                                   
REMARK 500    TYR B 163      -70.82    -52.17                                   
REMARK 500    ASN B 164       73.46   -163.94                                   
REMARK 500    LEU B 167      -60.69    -99.48                                   
REMARK 500    VAL B 169      -78.03   -142.40                                   
REMARK 500    SER B 171      -75.29    -62.14                                   
REMARK 500    ASP B 172       41.25    -64.15                                   
REMARK 500    LEU B 173       10.43   -147.91                                   
REMARK 500    GLU B 179       55.08   -143.54                                   
REMARK 500    ASP B 183     -174.51   -172.30                                   
REMARK 500    ARG B 184      -44.85   -171.47                                   
REMARK 500    GLN B 185      111.17     78.99                                   
REMARK 500    GLU B 204      -14.21   -140.24                                   
REMARK 500    PHE B 225       83.67    -68.36                                   
REMARK 500    LYS B 272      125.58    -36.99                                   
REMARK 500    VAL B 327     -162.03   -129.90                                   
REMARK 500    SER B 335      -72.40    -52.93                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500      G C  23         0.05    SIDE CHAIN                              
REMARK 500      G D  23         0.05    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1NFK   RELATED DB: PDB                                   
DBREF  1OOA A   39   363  UNP    P25799   NFKB1_MOUSE     39    363             
DBREF  1OOA B   39   363  UNP    P25799   NFKB1_MOUSE     39    363             
DBREF  1OOA C    1    29  PDB    1OOA     1OOA             1     29             
DBREF  1OOA D    1    29  PDB    1OOA     1OOA             1     29             
SEQADV 1OOA GLY A   38  UNP  P25799              CLONING ARTIFACT               
SEQADV 1OOA GLY B   38  UNP  P25799              CLONING ARTIFACT               
SEQRES   1 C   29    C   A   U   A   C   U   U   G   A   A   A   C   U          
SEQRES   2 C   29    G   U   A   A   G   G   U   U   G   G   C   G   U          
SEQRES   3 C   29    A   U   G                                                  
SEQRES   1 D   29    C   A   U   A   C   U   U   G   A   A   A   C   U          
SEQRES   2 D   29    G   U   A   A   G   G   U   U   G   G   C   G   U          
SEQRES   3 D   29    A   U   G                                                  
SEQRES   1 A  326  GLY GLY PRO TYR LEU GLN ILE LEU GLU GLN PRO LYS GLN          
SEQRES   2 A  326  ARG GLY PHE ARG PHE ARG TYR VAL CYS GLU GLY PRO SER          
SEQRES   3 A  326  HIS GLY GLY LEU PRO GLY ALA SER SER GLU LYS ASN LYS          
SEQRES   4 A  326  LYS SER TYR PRO GLN VAL LYS ILE CYS ASN TYR VAL GLY          
SEQRES   5 A  326  PRO ALA LYS VAL ILE VAL GLN LEU VAL THR ASN GLY LYS          
SEQRES   6 A  326  ASN ILE HIS LEU HIS ALA HIS SER LEU VAL GLY LYS HIS          
SEQRES   7 A  326  CYS GLU ASP GLY VAL CYS THR VAL THR ALA GLY PRO LYS          
SEQRES   8 A  326  ASP MET VAL VAL GLY PHE ALA ASN LEU GLY ILE LEU HIS          
SEQRES   9 A  326  VAL THR LYS LYS LYS VAL PHE GLU THR LEU GLU ALA ARG          
SEQRES  10 A  326  MET THR GLU ALA CYS ILE ARG GLY TYR ASN PRO GLY LEU          
SEQRES  11 A  326  LEU VAL HIS SER ASP LEU ALA TYR LEU GLN ALA GLU GLY          
SEQRES  12 A  326  GLY GLY ASP ARG GLN LEU THR ASP ARG GLU LYS GLU ILE          
SEQRES  13 A  326  ILE ARG GLN ALA ALA VAL GLN GLN THR LYS GLU MET ASP          
SEQRES  14 A  326  LEU SER VAL VAL ARG LEU MET PHE THR ALA PHE LEU PRO          
SEQRES  15 A  326  ASP SER THR GLY SER PHE THR ARG ARG LEU GLU PRO VAL          
SEQRES  16 A  326  VAL SER ASP ALA ILE TYR ASP SER LYS ALA PRO ASN ALA          
SEQRES  17 A  326  SER ASN LEU LYS ILE VAL ARG MET ASP ARG THR ALA GLY          
SEQRES  18 A  326  CYS VAL THR GLY GLY GLU GLU ILE TYR LEU LEU CYS ASP          
SEQRES  19 A  326  LYS VAL GLN LYS ASP ASP ILE GLN ILE ARG PHE TYR GLU          
SEQRES  20 A  326  GLU GLU GLU ASN GLY GLY VAL TRP GLU GLY PHE GLY ASP          
SEQRES  21 A  326  PHE SER PRO THR ASP VAL HIS ARG GLN PHE ALA ILE VAL          
SEQRES  22 A  326  PHE LYS THR PRO LYS TYR LYS ASP VAL ASN ILE THR LYS          
SEQRES  23 A  326  PRO ALA SER VAL PHE VAL GLN LEU ARG ARG LYS SER ASP          
SEQRES  24 A  326  LEU GLU THR SER GLU PRO LYS PRO PHE LEU TYR TYR PRO          
SEQRES  25 A  326  GLU ILE LYS ASP LYS GLU GLU VAL GLN ARG LYS ARG GLN          
SEQRES  26 A  326  LYS                                                          
SEQRES   1 B  326  GLY GLY PRO TYR LEU GLN ILE LEU GLU GLN PRO LYS GLN          
SEQRES   2 B  326  ARG GLY PHE ARG PHE ARG TYR VAL CYS GLU GLY PRO SER          
SEQRES   3 B  326  HIS GLY GLY LEU PRO GLY ALA SER SER GLU LYS ASN LYS          
SEQRES   4 B  326  LYS SER TYR PRO GLN VAL LYS ILE CYS ASN TYR VAL GLY          
SEQRES   5 B  326  PRO ALA LYS VAL ILE VAL GLN LEU VAL THR ASN GLY LYS          
SEQRES   6 B  326  ASN ILE HIS LEU HIS ALA HIS SER LEU VAL GLY LYS HIS          
SEQRES   7 B  326  CYS GLU ASP GLY VAL CYS THR VAL THR ALA GLY PRO LYS          
SEQRES   8 B  326  ASP MET VAL VAL GLY PHE ALA ASN LEU GLY ILE LEU HIS          
SEQRES   9 B  326  VAL THR LYS LYS LYS VAL PHE GLU THR LEU GLU ALA ARG          
SEQRES  10 B  326  MET THR GLU ALA CYS ILE ARG GLY TYR ASN PRO GLY LEU          
SEQRES  11 B  326  LEU VAL HIS SER ASP LEU ALA TYR LEU GLN ALA GLU GLY          
SEQRES  12 B  326  GLY GLY ASP ARG GLN LEU THR ASP ARG GLU LYS GLU ILE          
SEQRES  13 B  326  ILE ARG GLN ALA ALA VAL GLN GLN THR LYS GLU MET ASP          
SEQRES  14 B  326  LEU SER VAL VAL ARG LEU MET PHE THR ALA PHE LEU PRO          
SEQRES  15 B  326  ASP SER THR GLY SER PHE THR ARG ARG LEU GLU PRO VAL          
SEQRES  16 B  326  VAL SER ASP ALA ILE TYR ASP SER LYS ALA PRO ASN ALA          
SEQRES  17 B  326  SER ASN LEU LYS ILE VAL ARG MET ASP ARG THR ALA GLY          
SEQRES  18 B  326  CYS VAL THR GLY GLY GLU GLU ILE TYR LEU LEU CYS ASP          
SEQRES  19 B  326  LYS VAL GLN LYS ASP ASP ILE GLN ILE ARG PHE TYR GLU          
SEQRES  20 B  326  GLU GLU GLU ASN GLY GLY VAL TRP GLU GLY PHE GLY ASP          
SEQRES  21 B  326  PHE SER PRO THR ASP VAL HIS ARG GLN PHE ALA ILE VAL          
SEQRES  22 B  326  PHE LYS THR PRO LYS TYR LYS ASP VAL ASN ILE THR LYS          
SEQRES  23 B  326  PRO ALA SER VAL PHE VAL GLN LEU ARG ARG LYS SER ASP          
SEQRES  24 B  326  LEU GLU THR SER GLU PRO LYS PRO PHE LEU TYR TYR PRO          
SEQRES  25 B  326  GLU ILE LYS ASP LYS GLU GLU VAL GLN ARG LYS ARG GLN          
SEQRES  26 B  326  LYS                                                          
FORMUL   5  HOH   *294(H2 O)                                                    
HELIX    1   1 TYR A   57  GLY A   61  5                                   5    
HELIX    2   2 THR A  143  LYS A  145  5                                   3    
HELIX    3   3 LYS A  146  GLY A  162  1                                  17    
HELIX    4   4 ASN A  164  VAL A  169  1                                   6    
HELIX    5   5 HIS A  170  ALA A  174  5                                   5    
HELIX    6   6 THR A  187  LYS A  203  1                                  17    
HELIX    7   7 SER A  299  VAL A  303  5                                   5    
HELIX    8   8 TYR B   57  GLY B   61  5                                   5    
HELIX    9   9 LYS B  146  ARG B  161  1                                  16    
HELIX   10  10 ASN B  164  VAL B  169  1                                   6    
HELIX   11  11 HIS B  170  ALA B  174  5                                   5    
HELIX   12  12 THR B  187  LYS B  203  1                                  17    
HELIX   13  13 SER B  299  VAL B  303  5                                   5    
SHEET    1   A 3 TYR A  41  GLU A  46  0                                        
SHEET    2   A 3 GLN A  81  CYS A  85 -1  O  CYS A  85   N  TYR A  41           
SHEET    3   A 3 VAL A 131  GLY A 133 -1  O  VAL A 132   N  VAL A  82           
SHEET    1   B 5 CYS A 116  GLU A 117  0                                        
SHEET    2   B 5 VAL A 120  ALA A 125 -1  O  VAL A 120   N  GLU A 117           
SHEET    3   B 5 ALA A  91  VAL A  98 -1  N  ALA A  91   O  ALA A 125           
SHEET    4   B 5 VAL A 209  PRO A 219 -1  O  PHE A 217   N  LYS A  92           
SHEET    5   B 5 PHE A 225  ARG A 228 -1  O  ARG A 227   N  LEU A 218           
SHEET    1   C 5 CYS A 116  GLU A 117  0                                        
SHEET    2   C 5 VAL A 120  ALA A 125 -1  O  VAL A 120   N  GLU A 117           
SHEET    3   C 5 ALA A  91  VAL A  98 -1  N  ALA A  91   O  ALA A 125           
SHEET    4   C 5 VAL A 209  PRO A 219 -1  O  PHE A 217   N  LYS A  92           
SHEET    5   C 5 VAL A 232  TYR A 238 -1  O  ILE A 237   N  VAL A 210           
SHEET    1   D 2 SER A 110  GLY A 113  0                                        
SHEET    2   D 2 LEU A 137  LEU A 140 -1  O  LEU A 140   N  SER A 110           
SHEET    1   E 3 ILE A 250  MET A 253  0                                        
SHEET    2   E 3 GLU A 265  CYS A 270 -1  O  LEU A 269   N  ARG A 252           
SHEET    3   E 3 ALA A 308  LYS A 312 -1  O  PHE A 311   N  ILE A 266           
SHEET    1   F 5 ALA A 257  CYS A 259  0                                        
SHEET    2   F 5 LYS A 343  TYR A 348  1  O  LEU A 346   N  GLY A 258           
SHEET    3   F 5 ALA A 325  ARG A 332 -1  N  VAL A 327   O  PHE A 345           
SHEET    4   F 5 GLN A 279  GLU A 285 -1  N  ARG A 281   O  GLN A 330           
SHEET    5   F 5 VAL A 291  PHE A 295 -1  O  GLY A 294   N  PHE A 282           
SHEET    1   G 3 TYR B  41  GLU B  46  0                                        
SHEET    2   G 3 GLN B  81  CYS B  85 -1  O  LYS B  83   N  GLN B  43           
SHEET    3   G 3 VAL B 131  GLY B 133 -1  O  VAL B 132   N  VAL B  82           
SHEET    1   H 5 CYS B 116  GLU B 117  0                                        
SHEET    2   H 5 VAL B 120  THR B 124 -1  O  VAL B 120   N  GLU B 117           
SHEET    3   H 5 LYS B  92  VAL B  98 -1  N  VAL B  93   O  VAL B 123           
SHEET    4   H 5 VAL B 209  PRO B 219 -1  O  PHE B 217   N  LYS B  92           
SHEET    5   H 5 PHE B 225  ARG B 228 -1  O  ARG B 227   N  LEU B 218           
SHEET    1   I 5 CYS B 116  GLU B 117  0                                        
SHEET    2   I 5 VAL B 120  THR B 124 -1  O  VAL B 120   N  GLU B 117           
SHEET    3   I 5 LYS B  92  VAL B  98 -1  N  VAL B  93   O  VAL B 123           
SHEET    4   I 5 VAL B 209  PRO B 219 -1  O  PHE B 217   N  LYS B  92           
SHEET    5   I 5 VAL B 232  TYR B 238 -1  O  ILE B 237   N  VAL B 210           
SHEET    1   J 2 SER B 110  GLY B 113  0                                        
SHEET    2   J 2 LEU B 137  LEU B 140 -1  O  LEU B 140   N  SER B 110           
SHEET    1   K 3 ILE B 250  MET B 253  0                                        
SHEET    2   K 3 GLU B 265  CYS B 270 -1  O  LEU B 269   N  ARG B 252           
SHEET    3   K 3 ALA B 308  LYS B 312 -1  O  PHE B 311   N  ILE B 266           
SHEET    1   L 5 ALA B 257  CYS B 259  0                                        
SHEET    2   L 5 LYS B 343  TYR B 348  1  O  TYR B 348   N  GLY B 258           
SHEET    3   L 5 ALA B 325  ARG B 332 -1  N  VAL B 327   O  PHE B 345           
SHEET    4   L 5 GLN B 279  GLU B 285 -1  N  ARG B 281   O  GLN B 330           
SHEET    5   L 5 VAL B 291  PHE B 295 -1  O  GLY B 294   N  PHE B 282           
CRYST1   76.753  151.059   95.628  90.00 105.95  90.00 C 1 2 1       8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.013029  0.000000  0.003724        0.00000                         
SCALE2      0.000000  0.006620  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.010876        0.00000