PDB Short entry for 1OW3 HEADER GENE REGULATION/SIGNALING PROTEIN 28-MAR-03 1OW3 TITLE CRYSTAL STRUCTURE OF RHOA.GDP.MGF3-IN COMPLEX WITH RHOGAP COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHO-GTPASE-ACTIVATING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GTPASE-ACTIVATING PROTEIN RHOOGAP, RHO-RELATED SMALL GTPASE COMPND 5 PROTEIN ACTIVATOR, CDC42 GTPASE-ACTIVATING PROTEIN, P50-RHOGAP; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: TRANSFORMING PROTEIN RHOA; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: H12; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RHOGAP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: RHOA; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX, GTPASE, GAP, TRANSITION STATE, GENE REGULATION-SIGNALING KEYWDS 2 PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.L.GRAHAM,P.N.LOWE,G.W.GRIME,M.MARSH,K.RITTINGER,S.J.SMERDON, AUTHOR 2 S.J.GAMBLIN,J.F.ECCLESTON REVDAT 5 16-AUG-23 1OW3 1 REMARK REVDAT 4 27-OCT-21 1OW3 1 REMARK SEQADV LINK REVDAT 3 16-APR-14 1OW3 1 REMARK VERSN REVDAT 2 24-FEB-09 1OW3 1 VERSN REVDAT 1 06-MAY-03 1OW3 0 JRNL AUTH D.L.GRAHAM,P.N.LOWE,G.W.GRIME,M.MARSH,K.RITTINGER, JRNL AUTH 2 S.J.SMERDON,S.J.GAMBLIN,J.F.ECCLESTON JRNL TITL MGF(3)(-) AS A TRANSITION STATE ANALOG OF PHOSPHORYL JRNL TITL 2 TRANSFER JRNL REF CHEM.BIOL. V. 9 375 2002 JRNL REFN ISSN 1074-5521 JRNL PMID 11927263 JRNL DOI 10.1016/S1074-5521(02)00112-6 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 38536 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2038 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2758 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE SET COUNT : 161 REMARK 3 BIN FREE R VALUE : 0.2410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2998 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 374 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.17000 REMARK 3 B22 (A**2) : 1.01000 REMARK 3 B33 (A**2) : -0.84000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.126 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.119 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.434 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3096 ; 0.009 ; 0.026 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4214 ; 1.226 ; 2.008 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 373 ; 3.215 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 572 ;16.152 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 478 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2339 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1523 ; 0.245 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 318 ; 0.168 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 25 ; 0.208 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 20 ; 0.206 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1882 ; 0.669 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3067 ; 1.296 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1214 ; 1.904 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1147 ; 3.313 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1OW3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-APR-03. REMARK 100 THE DEPOSITION ID IS D_1000018724. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40618 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.40100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1TX4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG2KMME, 100MM MES, 10MM MGCL2, REMARK 280 10MM NAF, 2MM DEFEROXAMINE, 114MM (NH4)2SO4, PH 6.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.24500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.57500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.70000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.57500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.24500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.70000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 1 REMARK 465 VAL A 2 REMARK 465 LYS A 3 REMARK 465 LEU A 4 REMARK 465 GLU A 5 REMARK 465 GLN A 6 REMARK 465 LEU A 7 REMARK 465 GLY A 8 REMARK 465 ILE A 9 REMARK 465 PRO A 10 REMARK 465 ARG A 11 REMARK 465 GLN A 12 REMARK 465 VAL A 13 REMARK 465 LEU A 14 REMARK 465 LYS A 15 REMARK 465 TYR A 16 REMARK 465 ASP A 17 REMARK 465 ASP A 18 REMARK 465 PHE A 19 REMARK 465 LEU A 20 REMARK 465 LYS A 21 REMARK 465 SER A 22 REMARK 465 THR A 23 REMARK 465 GLN A 24 REMARK 465 LYS A 25 REMARK 465 SER A 26 REMARK 465 PRO A 27 REMARK 465 ALA A 28 REMARK 465 THR A 29 REMARK 465 ALA A 30 REMARK 465 PRO A 31 REMARK 465 LYS A 32 REMARK 465 PRO A 33 REMARK 465 MET A 34 REMARK 465 PRO A 35 REMARK 465 PRO A 36 REMARK 465 ARG A 37 REMARK 465 PRO A 38 REMARK 465 PRO A 235 REMARK 465 SER A 236 REMARK 465 PRO A 237 REMARK 465 ASP A 238 REMARK 465 PRO A 239 REMARK 465 SER A 240 REMARK 465 GLY A 241 REMARK 465 LEU A 242 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ARG B 182 REMARK 465 ARG B 183 REMARK 465 GLY B 184 REMARK 465 LYS B 185 REMARK 465 LYS B 186 REMARK 465 LYS B 187 REMARK 465 SER B 188 REMARK 465 GLY B 189 REMARK 465 CYS B 190 REMARK 465 LEU B 191 REMARK 465 VAL B 192 REMARK 465 LEU B 193 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 126 O HOH A 518 1.91 REMARK 500 C LEU B 179 O HOH B 706 1.98 REMARK 500 N GLN B 180 O HOH B 706 2.05 REMARK 500 OE2 GLU A 113 O HOH A 412 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 84 -8.01 79.12 REMARK 500 THR A 134 153.13 73.04 REMARK 500 VAL B 38 -78.59 -95.42 REMARK 500 LYS B 98 -60.00 -128.42 REMARK 500 LYS B 164 -8.86 80.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 681 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 19 OG1 REMARK 620 2 THR B 37 OG1 79.6 REMARK 620 3 GDP B 680 O2B 92.3 171.3 REMARK 620 4 MGF B 682 F2 166.5 87.0 101.2 REMARK 620 5 HOH B 684 O 89.5 87.0 90.0 89.8 REMARK 620 6 HOH B 685 O 88.2 89.1 93.7 91.6 175.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MGF B 682 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GDP B 680 O3B REMARK 620 2 MGF B 682 F1 96.6 REMARK 620 3 MGF B 682 F2 88.6 125.9 REMARK 620 4 MGF B 682 F3 88.1 108.2 125.8 REMARK 620 5 HOH B 683 O 172.4 91.0 86.9 89.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 681 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 680 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MGF B 682 DBREF 1OW3 A 1 242 UNP Q07960 RHG01_HUMAN 198 439 DBREF 1OW3 B 1 193 UNP P61586 RHOA_HUMAN 1 193 SEQADV 1OW3 ASN B 25 UNP P61586 PHE 25 ENGINEERED MUTATION SEQRES 1 A 242 HIS VAL LYS LEU GLU GLN LEU GLY ILE PRO ARG GLN VAL SEQRES 2 A 242 LEU LYS TYR ASP ASP PHE LEU LYS SER THR GLN LYS SER SEQRES 3 A 242 PRO ALA THR ALA PRO LYS PRO MET PRO PRO ARG PRO PRO SEQRES 4 A 242 LEU PRO ASN GLN GLN PHE GLY VAL SER LEU GLN HIS LEU SEQRES 5 A 242 GLN GLU LYS ASN PRO GLU GLN GLU PRO ILE PRO ILE VAL SEQRES 6 A 242 LEU ARG GLU THR VAL ALA TYR LEU GLN ALA HIS ALA LEU SEQRES 7 A 242 THR THR GLU GLY ILE PHE ARG ARG SER ALA ASN THR GLN SEQRES 8 A 242 VAL VAL ARG GLU VAL GLN GLN LYS TYR ASN MET GLY LEU SEQRES 9 A 242 PRO VAL ASP PHE ASP GLN TYR ASN GLU LEU HIS LEU PRO SEQRES 10 A 242 ALA VAL ILE LEU LYS THR PHE LEU ARG GLU LEU PRO GLU SEQRES 11 A 242 PRO LEU LEU THR PHE ASP LEU TYR PRO HIS VAL VAL GLY SEQRES 12 A 242 PHE LEU ASN ILE ASP GLU SER GLN ARG VAL PRO ALA THR SEQRES 13 A 242 LEU GLN VAL LEU GLN THR LEU PRO GLU GLU ASN TYR GLN SEQRES 14 A 242 VAL LEU ARG PHE LEU THR ALA PHE LEU VAL GLN ILE SER SEQRES 15 A 242 ALA HIS SER ASP GLN ASN LYS MET THR ASN THR ASN LEU SEQRES 16 A 242 ALA VAL VAL PHE GLY PRO ASN LEU LEU TRP ALA LYS ASP SEQRES 17 A 242 ALA ALA ILE THR LEU LYS ALA ILE ASN PRO ILE ASN THR SEQRES 18 A 242 PHE THR LYS PHE LEU LEU ASP HIS GLN GLY GLU LEU PHE SEQRES 19 A 242 PRO SER PRO ASP PRO SER GLY LEU SEQRES 1 B 193 MET ALA ALA ILE ARG LYS LYS LEU VAL ILE VAL GLY ASP SEQRES 2 B 193 GLY ALA CYS GLY LYS THR CYS LEU LEU ILE VAL ASN SER SEQRES 3 B 193 LYS ASP GLN PHE PRO GLU VAL TYR VAL PRO THR VAL PHE SEQRES 4 B 193 GLU ASN TYR VAL ALA ASP ILE GLU VAL ASP GLY LYS GLN SEQRES 5 B 193 VAL GLU LEU ALA LEU TRP ASP THR ALA GLY GLN GLU ASP SEQRES 6 B 193 TYR ASP ARG LEU ARG PRO LEU SER TYR PRO ASP THR ASP SEQRES 7 B 193 VAL ILE LEU MET CYS PHE SER ILE ASP SER PRO ASP SER SEQRES 8 B 193 LEU GLU ASN ILE PRO GLU LYS TRP THR PRO GLU VAL LYS SEQRES 9 B 193 HIS PHE CYS PRO ASN VAL PRO ILE ILE LEU VAL GLY ASN SEQRES 10 B 193 LYS LYS ASP LEU ARG ASN ASP GLU HIS THR ARG ARG GLU SEQRES 11 B 193 LEU ALA LYS MET LYS GLN GLU PRO VAL LYS PRO GLU GLU SEQRES 12 B 193 GLY ARG ASP MET ALA ASN ARG ILE GLY ALA PHE GLY TYR SEQRES 13 B 193 MET GLU CYS SER ALA LYS THR LYS ASP GLY VAL ARG GLU SEQRES 14 B 193 VAL PHE GLU MET ALA THR ARG ALA ALA LEU GLN ALA ARG SEQRES 15 B 193 ARG GLY LYS LYS LYS SER GLY CYS LEU VAL LEU HET MG B 681 1 HET GDP B 680 28 HET MGF B 682 4 HETNAM MG MAGNESIUM ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM MGF TRIFLUOROMAGNESATE FORMUL 3 MG MG 2+ FORMUL 4 GDP C10 H15 N5 O11 P2 FORMUL 5 MGF F3 MG 1- FORMUL 6 HOH *374(H2 O) HELIX 1 1 SER A 48 ASN A 56 1 9 HELIX 2 2 PRO A 63 ALA A 77 1 15 HELIX 3 3 ASN A 89 MET A 102 1 14 HELIX 4 4 ASP A 107 TYR A 111 5 5 HELIX 5 5 LEU A 114 LEU A 128 1 15 HELIX 6 6 THR A 134 ASP A 136 5 3 HELIX 7 7 LEU A 137 GLY A 143 1 7 HELIX 8 8 PHE A 144 ILE A 147 5 4 HELIX 9 9 ASP A 148 SER A 150 5 3 HELIX 10 10 GLN A 151 GLN A 161 1 11 HELIX 11 11 PRO A 164 HIS A 184 1 21 HELIX 12 12 HIS A 184 LYS A 189 1 6 HELIX 13 13 THR A 191 LEU A 204 1 14 HELIX 14 14 ASP A 208 ALA A 215 1 8 HELIX 15 15 ALA A 215 HIS A 229 1 15 HELIX 16 16 HIS A 229 PHE A 234 1 6 HELIX 17 17 GLY B 17 ASP B 28 1 12 HELIX 18 18 GLN B 63 ASP B 67 5 5 HELIX 19 19 LEU B 69 TYR B 74 5 6 HELIX 20 20 SER B 88 LYS B 98 1 11 HELIX 21 21 LYS B 98 CYS B 107 1 10 HELIX 22 22 LYS B 118 ARG B 122 5 5 HELIX 23 23 ASP B 124 LYS B 133 1 10 HELIX 24 24 LYS B 140 GLY B 152 1 13 HELIX 25 25 GLY B 166 LEU B 179 1 14 SHEET 1 A 6 PHE B 39 VAL B 48 0 SHEET 2 A 6 LYS B 51 THR B 60 -1 O VAL B 53 N ILE B 46 SHEET 3 A 6 ILE B 4 GLY B 12 1 N ILE B 4 O GLU B 54 SHEET 4 A 6 VAL B 79 SER B 85 1 O CYS B 83 N VAL B 11 SHEET 5 A 6 ILE B 112 ASN B 117 1 O ILE B 113 N ILE B 80 SHEET 6 A 6 GLY B 155 GLU B 158 1 O GLY B 155 N LEU B 114 LINK OG1 THR B 19 MG MG B 681 1555 1555 2.14 LINK OG1 THR B 37 MG MG B 681 1555 1555 2.18 LINK O2B GDP B 680 MG MG B 681 1555 1555 1.96 LINK O3B GDP B 680 MG MGF B 682 1555 1555 2.09 LINK MG MG B 681 F2 MGF B 682 1555 1555 1.94 LINK MG MG B 681 O HOH B 684 1555 1555 2.24 LINK MG MG B 681 O HOH B 685 1555 1555 2.13 LINK MG MGF B 682 O HOH B 683 1555 1555 2.11 SITE 1 AC1 6 THR B 19 THR B 37 GDP B 680 MGF B 682 SITE 2 AC1 6 HOH B 684 HOH B 685 SITE 1 AC2 26 ARG A 85 HOH A 427 ALA B 15 CYS B 16 SITE 2 AC2 26 GLY B 17 LYS B 18 THR B 19 CYS B 20 SITE 3 AC2 26 PHE B 30 TYR B 34 LYS B 118 ASP B 120 SITE 4 AC2 26 LEU B 121 SER B 160 ALA B 161 LYS B 162 SITE 5 AC2 26 MG B 681 MGF B 682 HOH B 684 HOH B 685 SITE 6 AC2 26 HOH B 698 HOH B 703 HOH B 743 HOH B 776 SITE 7 AC2 26 HOH B 806 HOH B 850 SITE 1 AC3 13 ARG A 85 GLY B 14 ALA B 15 LYS B 18 SITE 2 AC3 13 PRO B 36 THR B 37 GLY B 62 GLN B 63 SITE 3 AC3 13 GDP B 680 MG B 681 HOH B 683 HOH B 684 SITE 4 AC3 13 HOH B 685 CRYST1 66.490 71.400 91.150 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015040 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014010 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010970 0.00000