PDB Short entry for 1P8T HEADER SIGNALING PROTEIN 07-MAY-03 1P8T TITLE CRYSTAL STRUCTURE OF NOGO-66 RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: RETICULON 4 RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NOGO RECEPTOR, NGR, NOGO-66 RECEPTOR SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELL_LINE: 293 CELLS KEYWDS NGR, NOGO-66, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.A.BARTON,B.P.LIU,D.TZVETKOVA,P.D.JEFFREY,A.E.FOURNIER,D.SAH,R.CATE, AUTHOR 2 S.M.STRITTMATTER,D.B.NIKOLOV REVDAT 5 29-JUL-20 1P8T 1 COMPND REMARK HETNAM SITE REVDAT 5 2 1 ATOM REVDAT 4 13-JUL-11 1P8T 1 VERSN REVDAT 3 24-FEB-09 1P8T 1 VERSN REVDAT 2 23-DEC-03 1P8T 1 JRNL REVDAT 1 20-MAY-03 1P8T 0 JRNL AUTH W.A.BARTON,B.P.LIU,D.TZVETKOVA,P.D.JEFFREY,A.E.FOURNIER, JRNL AUTH 2 D.SAH,R.CATE,S.M.STRITTMATTER,D.B.NIKOLOV JRNL TITL STRUCTURE AND AXON OUTGROWTH INHIBITOR BINDING OF THE JRNL TITL 2 NOGO-66 RECEPTOR AND RELATED PROTEINS JRNL REF EMBO J. V. 22 3291 2003 JRNL REFN ISSN 0261-4189 JRNL PMID 12839991 JRNL DOI 10.1093/EMBOJ/CDG325 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 32616 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.265 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3133 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2224 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1P8T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAY-03. REMARK 100 THE DEPOSITION ID IS D_1000019151. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 8-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.21 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34022 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NACL, PH 6.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.05767 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 80.11533 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 80.11533 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 40.05767 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ASN A 35 CG OD1 ND2 REMARK 480 GLU A 36 CG CD OE1 OE2 REMARK 480 LYS A 38 CG CD CE NZ REMARK 480 ARG A 68 CG CD NE CZ NH1 NH2 REMARK 480 ARG A 78 CG CD NE CZ NH1 NH2 REMARK 480 ARG A 95 CG CD NE CZ NH1 NH2 REMARK 480 ASP A 122 CG OD1 OD2 REMARK 480 ARG A 139 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 144 CG CD OE1 OE2 REMARK 480 ARG A 151 CG CD NE CZ NH1 NH2 REMARK 480 ASP A 172 CB CG OD1 OD2 REMARK 480 ARG A 175 CG CD NE CZ NH1 NH2 REMARK 480 ASP A 176 CG OD1 OD2 REMARK 480 ARG A 189 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 195 CG CD OE1 OE2 REMARK 480 ARG A 196 CB CG CD NE CZ NH1 NH2 REMARK 480 ARG A 199 CG CD NE CZ NH1 NH2 REMARK 480 ASP A 205 CG OD1 OD2 REMARK 480 ARG A 213 CG CD NE CZ NH1 NH2 REMARK 480 ARG A 223 CB CG CD NE CZ NH1 NH2 REMARK 480 ARG A 227 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 244 CG CD OE1 OE2 REMARK 480 GLN A 253 CG CD OE1 NE2 REMARK 480 ARG A 256 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 277 CG CD CE NZ REMARK 480 ARG A 279 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 284 CG CD OE1 OE2 REMARK 480 GLN A 291 CG CD OE1 NE2 REMARK 480 LYS A 299 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 171 CG ARG A 196 1.29 REMARK 500 CB ALA A 75 NE ARG A 78 1.44 REMARK 500 CE1 HIS A 220 OE1 GLU A 244 1.83 REMARK 500 OE2 GLU A 195 NE2 HIS A 218 1.94 REMARK 500 CG GLU A 195 CD2 HIS A 218 1.95 REMARK 500 CG GLU A 195 NE2 HIS A 218 1.96 REMARK 500 CB SER A 282 NZ LYS A 299 2.04 REMARK 500 OD1 ASP A 171 CD ARG A 196 2.11 REMARK 500 O ARG A 196 CG ARG A 199 2.11 REMARK 500 CD2 LEU A 275 NZ LYS A 299 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 139 CB ALA A 310 3654 1.79 REMARK 500 OE1 GLU A 36 O GLN A 276 3654 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 278 N PHE A 278 CA 0.162 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 278 N - CA - C ANGL. DEV. = 17.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 36 -99.79 -3.91 REMARK 500 SER A 42 99.78 43.95 REMARK 500 ALA A 58 33.22 -74.59 REMARK 500 ASN A 67 -152.43 -95.74 REMARK 500 ILE A 69 107.34 -58.44 REMARK 500 ALA A 79 1.45 -64.71 REMARK 500 CYS A 80 45.64 -97.82 REMARK 500 SER A 90 69.79 65.03 REMARK 500 ASN A 91 13.00 -146.03 REMARK 500 ALA A 94 -35.93 -133.34 REMARK 500 ALA A 99 -75.51 -74.72 REMARK 500 ALA A 100 -104.98 40.83 REMARK 500 ALA A 116 9.27 -63.08 REMARK 500 ARG A 119 -23.09 56.91 REMARK 500 PRO A 123 -34.36 -37.19 REMARK 500 LEU A 129 53.65 19.03 REMARK 500 PRO A 147 -94.22 -28.99 REMARK 500 ALA A 154 -69.74 7.71 REMARK 500 ASN A 164 -160.59 -125.80 REMARK 500 LEU A 177 81.53 -69.09 REMARK 500 ASN A 188 -146.25 -93.25 REMARK 500 ARG A 199 -70.54 -93.89 REMARK 500 LEU A 201 38.42 -62.17 REMARK 500 SER A 203 4.74 55.00 REMARK 500 ARG A 206 115.43 -162.26 REMARK 500 HIS A 210 170.70 -56.35 REMARK 500 HIS A 220 -8.49 72.21 REMARK 500 ARG A 223 53.41 -68.11 REMARK 500 ASP A 224 19.90 150.03 REMARK 500 ARG A 227 -18.03 66.07 REMARK 500 ALA A 235 78.52 55.16 REMARK 500 ASN A 236 6.09 -155.90 REMARK 500 PRO A 242 -174.64 -59.89 REMARK 500 THR A 243 -77.02 -78.20 REMARK 500 GLU A 244 0.92 -57.25 REMARK 500 LEU A 249 48.83 -71.87 REMARK 500 TRP A 262 109.95 -59.19 REMARK 500 CYS A 264 69.61 -115.38 REMARK 500 PHE A 278 116.92 -27.05 REMARK 500 SER A 283 -147.77 -112.35 REMARK 500 LEU A 289 143.91 -179.52 REMARK 500 GLN A 291 -170.39 -63.94 REMARK 500 ARG A 292 -23.46 66.30 REMARK 500 GLN A 307 -154.45 -112.42 REMARK 500 CYS A 309 -168.85 -75.04 REMARK 500 ALA A 310 84.03 -26.08 REMARK 500 REMARK 500 REMARK: NULL DBREF 1P8T A 27 311 UNP Q9BZR6 RTN4R_HUMAN 27 311 SEQRES 1 A 285 CYS PRO GLY ALA CYS VAL CYS TYR ASN GLU PRO LYS VAL SEQRES 2 A 285 THR THR SER CYS PRO GLN GLN GLY LEU GLN ALA VAL PRO SEQRES 3 A 285 VAL GLY ILE PRO ALA ALA SER GLN ARG ILE PHE LEU HIS SEQRES 4 A 285 GLY ASN ARG ILE SER HIS VAL PRO ALA ALA SER PHE ARG SEQRES 5 A 285 ALA CYS ARG ASN LEU THR ILE LEU TRP LEU HIS SER ASN SEQRES 6 A 285 VAL LEU ALA ARG ILE ASP ALA ALA ALA PHE THR GLY LEU SEQRES 7 A 285 ALA LEU LEU GLU GLN LEU ASP LEU SER ASP ASN ALA GLN SEQRES 8 A 285 LEU ARG SER VAL ASP PRO ALA THR PHE HIS GLY LEU GLY SEQRES 9 A 285 ARG LEU HIS THR LEU HIS LEU ASP ARG CYS GLY LEU GLN SEQRES 10 A 285 GLU LEU GLY PRO GLY LEU PHE ARG GLY LEU ALA ALA LEU SEQRES 11 A 285 GLN TYR LEU TYR LEU GLN ASP ASN ALA LEU GLN ALA LEU SEQRES 12 A 285 PRO ASP ASP THR PHE ARG ASP LEU GLY ASN LEU THR HIS SEQRES 13 A 285 LEU PHE LEU HIS GLY ASN ARG ILE SER SER VAL PRO GLU SEQRES 14 A 285 ARG ALA PHE ARG GLY LEU HIS SER LEU ASP ARG LEU LEU SEQRES 15 A 285 LEU HIS GLN ASN ARG VAL ALA HIS VAL HIS PRO HIS ALA SEQRES 16 A 285 PHE ARG ASP LEU GLY ARG LEU MET THR LEU TYR LEU PHE SEQRES 17 A 285 ALA ASN ASN LEU SER ALA LEU PRO THR GLU ALA LEU ALA SEQRES 18 A 285 PRO LEU ARG ALA LEU GLN TYR LEU ARG LEU ASN ASP ASN SEQRES 19 A 285 PRO TRP VAL CYS ASP CYS ARG ALA ARG PRO LEU TRP ALA SEQRES 20 A 285 TRP LEU GLN LYS PHE ARG GLY SER SER SER GLU VAL PRO SEQRES 21 A 285 CYS SER LEU PRO GLN ARG LEU ALA GLY ARG ASP LEU LYS SEQRES 22 A 285 ARG LEU ALA ALA ASN ASP LEU GLN GLY CYS ALA VAL HET NAG A 401 15 HET NDG A 402 15 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM NDG 2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE FORMUL 2 NAG C8 H15 N O6 FORMUL 3 NDG C8 H15 N O6 HELIX 1 1 ASP A 265 ARG A 267 5 3 HELIX 2 2 ALA A 268 PHE A 278 1 11 HELIX 3 3 ASP A 297 LEU A 301 5 5 HELIX 4 4 ALA A 302 LEU A 306 5 5 SHEET 1 A 9 ARG A 61 PHE A 63 0 SHEET 2 A 9 ILE A 85 TRP A 87 1 O ILE A 85 N ILE A 62 SHEET 3 A 9 GLN A 109 ASP A 111 1 O ASP A 111 N LEU A 86 SHEET 4 A 9 THR A 134 HIS A 136 1 O THR A 134 N LEU A 110 SHEET 5 A 9 TYR A 158 TYR A 160 1 O TYR A 158 N LEU A 135 SHEET 6 A 9 HIS A 182 PHE A 184 1 O HIS A 182 N LEU A 159 SHEET 7 A 9 ARG A 206 LEU A 208 1 O LEU A 208 N LEU A 183 SHEET 8 A 9 THR A 230 TYR A 232 1 O TYR A 232 N LEU A 207 SHEET 9 A 9 TYR A 254 ARG A 256 1 O TYR A 254 N LEU A 231 SHEET 1 B 2 HIS A 71 VAL A 72 0 SHEET 2 B 2 ARG A 95 ILE A 96 1 O ARG A 95 N VAL A 72 SHEET 1 C 2 SER A 192 VAL A 193 0 SHEET 2 C 2 HIS A 216 VAL A 217 1 O HIS A 216 N VAL A 193 SHEET 1 D 2 TRP A 262 VAL A 263 0 SHEET 2 D 2 CYS A 287 LEU A 289 1 O SER A 288 N TRP A 262 SSBOND 1 CYS A 27 CYS A 33 1555 1555 2.03 SSBOND 2 CYS A 31 CYS A 43 1555 1555 2.04 SSBOND 3 CYS A 264 CYS A 287 1555 1555 2.03 SSBOND 4 CYS A 266 CYS A 309 1555 1555 2.05 CISPEP 1 LEU A 289 PRO A 290 0 0.67 CRYST1 123.958 123.958 120.173 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008067 0.004658 0.000000 0.00000 SCALE2 0.000000 0.009315 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008321 0.00000