PDB Short entry for 1Q7R HEADER TRANSFERASE 19-AUG-03 1Q7R TITLE X-RAY CRYSTALLOGRAPHIC ANALYSIS OF A PREDICTED TITLE 2 AMIDOTRANSFERASE FROM B. STEAROTHERMOPHILUS AT 1.9 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PREDICTED AMIDOTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 1422; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21-DE3 KEYWDS STRUCTURAL GENOMICS, YAAE, PDX2, PREDICTED GLUTAMINE KEYWDS 2 AMIDOTRANSFERASE, PSI, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG EXPDTA X-RAY DIFFRACTION AUTHOR D.J.MILLER,W.F.ANDERSON,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 3 24-FEB-09 1Q7R 1 VERSN REVDAT 2 18-JAN-05 1Q7R 1 AUTHOR KEYWDS REMARK REVDAT 1 11-NOV-03 1Q7R 0 JRNL AUTH D.J.MILLER,W.F.ANDERSON JRNL TITL X-RAY STRUCTURE ANALYSIS OF A PREDICTED JRNL TITL 2 AMIDOTRANSFERASE FROM B. STEAROTHERMOPHILUS AT 1.9 JRNL TITL 3 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 15492 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 817 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 993 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1547 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 126 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.167 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.151 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.104 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.548 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1584 ; 0.007 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1476 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2141 ; 1.577 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3424 ; 0.712 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 211 ; 2.664 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 239 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1815 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 318 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 354 ; 0.240 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1748 ; 0.279 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1004 ; 0.088 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 105 ; 0.185 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 28 ; 0.350 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 59 ; 0.383 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.145 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1023 ; 3.813 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1623 ; 5.483 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 561 ; 5.421 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 518 ; 7.999 ; 3.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 1Q7R COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-AUG-03. REMARK 100 THE RCSB ID CODE IS RCSB020022. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-03 REMARK 200 TEMPERATURE (KELVIN) : 170 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 5ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979174 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16323 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 27.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.28600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: DROP: 0.05 M NAAC PH 5.0, 5 MM REMARK 280 TRIS PH 8.3, 9% PEG 4K, 0.15 M AMS, 0.25 M NACL, 2.5 MM DTT; REMARK 280 RESEVOIR: 0.1 M NAAC PH 5.0, 18 % PEG 4K, 0.3 M AMS., VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 101.33400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 22.47350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 22.47350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 152.00100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 22.47350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 22.47350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 50.66700 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 22.47350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 22.47350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 152.00100 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 22.47350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 22.47350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 50.66700 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 101.33400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 SER A -15 REMARK 465 SER A -14 REMARK 465 GLY A -13 REMARK 465 VAL A -12 REMARK 465 ASP A -11 REMARK 465 LEU A -10 REMARK 465 GLY A -9 REMARK 465 THR A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A -5 CG CD1 CD2 REMARK 470 PHE A -3 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A -2 CG CD OE1 NE2 REMARK 470 ASN A 0 CG OD1 ND2 REMARK 470 ARG A 13 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 57 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 110 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 111 CG CD OE1 NE2 REMARK 470 ARG A 112 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 196 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 39 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 9 -66.89 -28.61 REMARK 500 CYS A 78 -135.98 54.17 REMARK 500 ARG A 110 -157.34 -163.08 REMARK 500 GLN A 111 54.12 -106.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 400 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 500 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 300 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC35754 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 NO APPROPRIATE SEQUENCE DATABASE REFERENCE REMARK 999 WAS AVAILABLE AT THE TIME OF PROCESSING THIS REMARK 999 FILE. DBREF 1Q7R A 1 196 UNP P83813 PDXT_BACST 1 196 SEQRES 1 A 219 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 219 GLY THR GLU ASN LEU TYR PHE GLN SER ASN MSE LYS ILE SEQRES 3 A 219 GLY VAL LEU GLY LEU GLN GLY ALA VAL ARG GLU HIS VAL SEQRES 4 A 219 ARG ALA ILE GLU ALA CYS GLY ALA GLU ALA VAL ILE VAL SEQRES 5 A 219 LYS LYS SER GLU GLN LEU GLU GLY LEU ASP GLY LEU VAL SEQRES 6 A 219 LEU PRO GLY GLY GLU SER THR THR MSE ARG ARG LEU ILE SEQRES 7 A 219 ASP ARG TYR GLY LEU MSE GLU PRO LEU LYS GLN PHE ALA SEQRES 8 A 219 ALA ALA GLY LYS PRO MSE PHE GLY THR CYS ALA GLY LEU SEQRES 9 A 219 ILE LEU LEU ALA LYS ARG ILE VAL GLY TYR ASP GLU PRO SEQRES 10 A 219 HIS LEU GLY LEU MSE ASP ILE THR VAL GLU ARG ASN SER SEQRES 11 A 219 PHE GLY ARG GLN ARG GLU SER PHE GLU ALA GLU LEU SER SEQRES 12 A 219 ILE LYS GLY VAL GLY ASP GLY PHE VAL GLY VAL PHE ILE SEQRES 13 A 219 ARG ALA PRO HIS ILE VAL GLU ALA GLY ASP GLY VAL ASP SEQRES 14 A 219 VAL LEU ALA THR TYR ASN ASP ARG ILE VAL ALA ALA ARG SEQRES 15 A 219 GLN GLY GLN PHE LEU GLY CYS SER PHE HIS PRO GLU LEU SEQRES 16 A 219 THR ASP ASP HIS ARG LEU MSE GLN TYR PHE LEU ASN MSE SEQRES 17 A 219 VAL LYS GLU ALA LYS MSE ALA SER SER LEU LYS MODRES 1Q7R MSE A 1 MET SELENOMETHIONINE MODRES 1Q7R MSE A 51 MET SELENOMETHIONINE MODRES 1Q7R MSE A 61 MET SELENOMETHIONINE MODRES 1Q7R MSE A 74 MET SELENOMETHIONINE MODRES 1Q7R MSE A 99 MET SELENOMETHIONINE MODRES 1Q7R MSE A 179 MET SELENOMETHIONINE MODRES 1Q7R MSE A 185 MET SELENOMETHIONINE MODRES 1Q7R MSE A 191 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 51 8 HET MSE A 61 8 HET MSE A 74 8 HET MSE A 99 8 HET MSE A 179 8 HET MSE A 185 8 HET MSE A 191 16 HET SO4 A 400 5 HET CL A 500 1 HET EDO A 300 4 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 SO4 O4 S 2- FORMUL 3 CL CL 1- FORMUL 4 EDO C2 H6 O2 FORMUL 5 HOH *126(H2 O) HELIX 1 1 LEU A 8 ALA A 11 5 4 HELIX 2 2 VAL A 12 CYS A 22 1 11 HELIX 3 3 LYS A 31 GLU A 36 5 6 HELIX 4 4 GLU A 47 TYR A 58 1 12 HELIX 5 5 LEU A 60 ALA A 70 1 11 HELIX 6 6 ALA A 79 LEU A 84 1 6 HELIX 7 7 ARG A 105 ARG A 110 1 6 HELIX 8 8 HIS A 169 THR A 173 5 5 HELIX 9 9 HIS A 176 LYS A 196 1 21 SHEET 1 A 7 GLU A 25 VAL A 29 0 SHEET 2 A 7 LYS A 2 LEU A 6 1 N ILE A 3 O GLU A 25 SHEET 3 A 7 GLY A 40 LEU A 43 1 O VAL A 42 N GLY A 4 SHEET 4 A 7 MSE A 74 THR A 77 1 O PHE A 75 N LEU A 43 SHEET 5 A 7 PHE A 163 CYS A 166 1 O LEU A 164 N MSE A 74 SHEET 6 A 7 ARG A 154 GLN A 160 -1 N ALA A 158 O GLY A 165 SHEET 7 A 7 ASP A 146 TYR A 151 -1 N ASP A 146 O ARG A 159 SHEET 1 B 3 ALA A 85 VAL A 89 0 SHEET 2 B 3 MSE A 99 GLU A 104 1 O VAL A 103 N ARG A 87 SHEET 3 B 3 HIS A 137 ALA A 141 -1 O HIS A 137 N GLU A 104 SHEET 1 C 2 PHE A 115 ILE A 121 0 SHEET 2 C 2 GLY A 125 PHE A 132 -1 O GLY A 130 N ALA A 117 LINK C ASN A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C THR A 50 N MSE A 51 1555 1555 1.33 LINK C MSE A 51 N ARG A 52 1555 1555 1.33 LINK C LEU A 60 N MSE A 61 1555 1555 1.33 LINK C MSE A 61 N GLU A 62 1555 1555 1.33 LINK C PRO A 73 N MSE A 74 1555 1555 1.33 LINK C MSE A 74 N PHE A 75 1555 1555 1.33 LINK C LEU A 98 N MSE A 99 1555 1555 1.33 LINK C MSE A 99 N ASP A 100 1555 1555 1.33 LINK C LEU A 178 N MSE A 179 1555 1555 1.32 LINK C MSE A 179 N GLN A 180 1555 1555 1.33 LINK C ASN A 184 N MSE A 185 1555 1555 1.33 LINK C MSE A 185 N VAL A 186 1555 1555 1.33 LINK C LYS A 190 N BMSE A 191 1555 1555 1.33 LINK C LYS A 190 N AMSE A 191 1555 1555 1.33 LINK C BMSE A 191 N ALA A 192 1555 1555 1.33 LINK C AMSE A 191 N ALA A 192 1555 1555 1.33 SITE 1 AC1 6 ARG A 105 ASN A 106 SER A 107 ARG A 134 SITE 2 AC1 6 HOH A 512 HOH A 589 SITE 1 AC2 1 HOH A 505 SITE 1 AC3 4 LYS A 122 VAL A 145 ASP A 146 VAL A 147 CRYST1 44.947 44.947 202.668 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022248 0.000000 0.000000 0.00000 SCALE2 0.000000 0.022248 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004934 0.00000