PDB Short entry for 1QCV HEADER ELECTRON TRANSPORT 10-MAY-99 1QCV TITLE RUBREDOXIN VARIANT (PFRD-XC4) FOLDS WITHOUT IRON COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (RUBREDOXIN VARIANT PFRD-XC4); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 2261; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYPERTHERMOPHILE, RUBREDOXIN, ELECTRON TRANSPORT EXPDTA SOLUTION NMR NUMMDL 29 AUTHOR P.STROP,S.L.MAYO REVDAT 4 14-MAR-18 1QCV 1 REMARK SEQADV REVDAT 3 24-FEB-09 1QCV 1 VERSN REVDAT 2 05-MAY-00 1QCV 1 REMARK SEQADV REVDAT 1 18-FEB-00 1QCV 0 JRNL AUTH P.STROP,S.L.MAYO JRNL TITL CONTRIBUTION OF SURFACE SALT BRIDGES TO PROTEIN STABILITY. JRNL REF BIOCHEMISTRY V. 39 1251 2000 JRNL REFN ISSN 0006-2960 JRNL PMID 10684603 JRNL DOI 10.1021/BI992257J REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.STROP,S.L.MAYO REMARK 1 TITL RUBREDOXIN VARIANT FOLDS WITHOUT IRON REMARK 1 REF J.AM.CHEM.SOC. V. 121 2341 1999 REMARK 1 REFN ISSN 0002-7863 REMARK 1 DOI 10.1021/JA9834780 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1QCV COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAY-99. REMARK 100 THE DEPOSITION ID IS D_1000009085. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.0 REMARK 210 PH : 6.3 REMARK 210 IONIC STRENGTH : 225MM REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.5MM PFRD-XC4 ACETATE-D3 PH REMARK 210 6.3; 200MM NACL; 90/10 H2O/D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : DQF-COSY NOESY TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ANSIG, VARIANT VNMR VNMR REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 40 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 29 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS & LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 29 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 18 90.54 -176.28 REMARK 500 1 VAL A 37 117.14 -167.43 REMARK 500 1 ALA A 38 177.17 -58.71 REMARK 500 1 PRO A 39 -160.57 -69.30 REMARK 500 1 ALA A 43 -62.65 -169.17 REMARK 500 1 PHE A 48 -169.03 -109.78 REMARK 500 1 LYS A 50 179.66 -54.22 REMARK 500 2 THR A 8 -41.74 -147.94 REMARK 500 2 ASP A 18 88.81 -173.72 REMARK 500 2 ILE A 40 94.68 -62.53 REMARK 500 2 LYS A 50 -170.29 -57.99 REMARK 500 2 LEU A 51 63.61 -111.10 REMARK 500 2 GLU A 52 -176.14 -55.90 REMARK 500 3 ASP A 18 94.42 174.24 REMARK 500 3 THR A 27 101.19 55.64 REMARK 500 3 PRO A 39 -162.46 -71.88 REMARK 500 3 THR A 41 98.05 -53.48 REMARK 500 3 PRO A 44 -164.14 -69.61 REMARK 500 3 LYS A 50 173.78 -58.48 REMARK 500 4 LYS A 2 -166.76 -111.87 REMARK 500 4 ASP A 18 90.13 -178.59 REMARK 500 4 THR A 41 46.13 -154.36 REMARK 500 4 ALA A 43 -50.47 -177.00 REMARK 500 4 GLU A 47 -33.10 -132.38 REMARK 500 4 LEU A 51 48.53 -89.90 REMARK 500 5 THR A 8 36.59 -146.81 REMARK 500 5 ASP A 18 88.70 -174.48 REMARK 500 5 ILE A 40 -40.92 -169.19 REMARK 500 5 THR A 41 -44.04 -161.73 REMARK 500 5 PRO A 44 -163.48 -71.34 REMARK 500 5 LEU A 51 35.35 -99.18 REMARK 500 5 GLU A 52 -163.91 -61.04 REMARK 500 6 ASP A 18 94.14 176.17 REMARK 500 6 LEU A 32 171.40 -52.99 REMARK 500 6 ASP A 35 -0.12 69.90 REMARK 500 6 THR A 41 70.31 44.28 REMARK 500 6 ALA A 43 57.14 -163.25 REMARK 500 6 PRO A 44 -164.50 -71.18 REMARK 500 6 GLU A 47 -33.69 -160.17 REMARK 500 7 ILE A 7 -74.11 -56.15 REMARK 500 7 ASP A 18 88.72 -175.61 REMARK 500 7 PRO A 39 -163.03 -71.81 REMARK 500 7 THR A 41 95.45 -50.97 REMARK 500 7 ALA A 43 56.60 -151.62 REMARK 500 7 PRO A 44 -164.82 -69.21 REMARK 500 7 LEU A 51 47.47 -97.71 REMARK 500 8 THR A 8 -54.14 -149.72 REMARK 500 8 ASP A 18 95.12 172.25 REMARK 500 8 THR A 27 99.13 55.11 REMARK 500 8 TRP A 36 -81.45 -61.79 REMARK 500 REMARK 500 THIS ENTRY HAS 218 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1QCV A 1 53 UNP P24297 RUBR_PYRFU 1 53 SEQADV 1QCV LEU A 5 UNP P24297 CYS 5 ENGINEERED MUTATION SEQADV 1QCV THR A 8 UNP P24297 CYS 8 ENGINEERED MUTATION SEQADV 1QCV ALA A 38 UNP P24297 CYS 38 ENGINEERED MUTATION SEQADV 1QCV THR A 41 UNP P24297 CYS 41 ENGINEERED MUTATION SEQRES 1 A 53 ALA LYS TRP VAL LEU LYS ILE THR GLY TYR ILE TYR ASP SEQRES 2 A 53 GLU ASP ALA GLY ASP PRO ASP ASN GLY ILE SER PRO GLY SEQRES 3 A 53 THR LYS PHE GLU GLU LEU PRO ASP ASP TRP VAL ALA PRO SEQRES 4 A 53 ILE THR GLY ALA PRO LYS SER GLU PHE GLU LYS LEU GLU SEQRES 5 A 53 ASP SHEET 1 A 3 ILE A 11 ASP A 13 0 SHEET 2 A 3 LYS A 2 VAL A 4 -1 O TRP A 3 N TYR A 12 SHEET 3 A 3 GLU A 49 LYS A 50 -1 O GLU A 49 N VAL A 4 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000