PDB Short entry for 1QIV HEADER CALCIUM-BINDING PROTEIN 17-JUN-99 1QIV TITLE CALMODULIN COMPLEXED WITH N-(3,3,-DIPHENYLPROPYL)-N'-[1-R-(3,4-BIS- TITLE 2 BUTOXYPHENYL)-ETHYL]-PROPYLENEDIAMINE (DPD), 1:2 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALMODULIN; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 ORGAN: BRAIN; SOURCE 6 CELLULAR_LOCATION: CYTOPLASM KEYWDS CALCIUM-BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.HARMAT,Z.S.BOCSKEI,B.G.VERTESSY,G.NARAY-SZABO,J.OVADI REVDAT 6 13-DEC-23 1QIV 1 REMARK LINK REVDAT 5 08-MAY-19 1QIV 1 REMARK REVDAT 4 05-JUL-17 1QIV 1 REMARK REVDAT 3 24-MAR-09 1QIV 1 REMARK MASTER REVDAT 2 24-FEB-09 1QIV 1 VERSN REVDAT 1 28-MAR-00 1QIV 0 JRNL AUTH V.HARMAT,Z.S.BOCSKEI,G.NARAY-SZABO,I.BATA,A.S.CSUTOR, JRNL AUTH 2 I.HERMECZ,P.ARANYI,B.SZABO,K.LILIOM,B.G.VERTESSY,J.OVADI JRNL TITL A NEW POTENT CALMODULIN ANTAGONIST WITH ARYLALKYLAMINE JRNL TITL 2 STRUCTURE: CRYSTALLOGRAPHIC, SPECTROSCOPIC AND FUNCTIONAL JRNL TITL 3 STUDIES JRNL REF J.MOL.BIOL. V. 297 747 2000 JRNL REFN ISSN 0022-2836 JRNL PMID 10731425 JRNL DOI 10.1006/JMBI.2000.3607 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH B.G.VERTESSY,V.HARMAT,Z.S.BOCSKEI,G.NARAY-SZABO,F.OROSZ, REMARK 1 AUTH 2 J.OVADI REMARK 1 TITL SIMULTANEOUS BINDING OF DRUGS WITH DIFFERENT CHEMICAL REMARK 1 TITL 2 STRUCTURES TO CA 2+ CALMODULIN: CRYSTALLOGRAPHIC AND REMARK 1 TITL 3 SPECTROSCOPIC STUDIES REMARK 1 REF BIOCHEMISTRY V. 37 15300 1998 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 9799490 REMARK 1 DOI 10.1021/BI980795A REMARK 1 REFERENCE 2 REMARK 1 AUTH B.G.VERTESSY,Z.S.BOCSKEI,V.HARMATH,G.NARAY-SZABO,J.OVADI REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY DIFFRACTION ANALYSIS OF REMARK 1 TITL 2 CA(2+)-CALMODULIN-DRUG AND APOCALMODULIN-DRUG COMPLEXES. REMARK 1 REF PROTEINS: STRUCT.,FUNCT., V. 28 131 1997 REMARK 1 REF 2 GENET. REMARK 1 REFN ISSN 0887-3585 REMARK 1 PMID 9144798 REMARK 1 DOI 10.1002/(SICI)1097-0134(199705)28:1<131::AID-PROT13>3.0.CO;2 REMARK 1 DOI 2 -K REMARK 1 REFERENCE 3 REMARK 1 AUTH M.VANDONSELAAR,R.A.HICKIE,J.W.QUAIL,L.T.J.DELBAERE REMARK 1 TITL TRIFLUOPERAZINE-INDUCED CONFORMATIONAL CHANGE IN CA REMARK 1 TITL 2 (2+)-CALMODULIN REMARK 1 REF NAT.STRUCT.BIOL. V. 1 795 1994 REMARK 1 REFN ISSN 1072-8368 REMARK 1 PMID 7634090 REMARK 1 DOI 10.1038/NSB1194-795 REMARK 1 REFERENCE 4 REMARK 1 AUTH W.J.COOK,L.J.WALTER,M.R.WALTER REMARK 1 TITL DRUG BINDING BY CALMODULIN: CRYSTAL STRUCTURE OF A REMARK 1 TITL 2 CALMODULIN-TRIFLUOPERAZINE COMPLEX REMARK 1 REF BIOCHEMISTRY V. 33 15259 1994 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 7803388 REMARK 1 DOI 10.1021/BI00255A006 REMARK 2 REMARK 2 RESOLUTION. 2.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 4965 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.301 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 259 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.64 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 473 REMARK 3 BIN R VALUE (WORKING SET) : 0.2280 REMARK 3 BIN FREE R VALUE : 0.4450 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 30 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.085 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1096 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 80 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.67600 REMARK 3 B22 (A**2) : -0.67600 REMARK 3 B33 (A**2) : -2.98500 REMARK 3 B12 (A**2) : -1.46600 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM SIGMAA (A) : 0.25 REMARK 3 LOW RESOLUTION CUTOFF (A) : 2.74 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.53 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.358 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.23 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.566 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : GROUP REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CA.PAR REMARK 3 PARAMETER FILE 3 : AAA.PAR REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : CA.TOP REMARK 3 TOPOLOGY FILE 3 : AAA.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DISORDERED SIDE CHAIN ATOMS OF RESIDUES REMARK 3 ARG 74 - THR 79 AND SER 81 OF THE CENTRAL REGION, GLU 6, GLU 83, REMARK 3 TRIMETHYL-LYSINE 115, GLU 123 AND GLU 127 ARE NOT SEEN IN THE REMARK 3 CRYSTAL STRUCTURE, AS WELL AS THE N-TERMINAL ALA 1, ASP 2 AND C- REMARK 3 TERMINAL ALA 147, LYS 148 RESIDUES. TEMPERATURE FACTORS FOR THE REMARK 3 ATOMS IN RESIDUES 75 - 81 ARE UNUSUALLY HIGH, INDICATING REMARK 3 FLEXIBILITY IN THIS REGION. THE C-TERMINAL RESIDUES WERE NOT REMARK 3 SEEN IN THE DENSITY MAPS REMARK 4 REMARK 4 1QIV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUN-99. REMARK 100 THE DEPOSITION ID IS D_1290002823. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-97 REMARK 200 TEMPERATURE (KELVIN) : 93.0 REMARK 200 PH : 5.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH2R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE(002) REMARK 200 OPTICS : NORMAL FOCUS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4969 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.630 REMARK 200 RESOLUTION RANGE LOW (A) : 24.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.12300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 9.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR 3.851 REMARK 200 STARTING MODEL: PDB ENTRY 1LIN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED BY HANGING REMARK 280 DROP TECHNIQUE AT ROOM TEMPERATURE FROM 50 MM PH=5.0 SODIUM REMARK 280 CACODYLATE/HCL BUFFER, 10 MM MGCL2, 10 MM CACL2, 2MM DPD AND 28% REMARK 280 PEG 8000. CRYSTAL GROWTH TOOK 2-3 WEEKS., PH 5.00, VAPOR REMARK 280 DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 115.87600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.93800 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.93800 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 115.87600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 ASP A 2 REMARK 465 ALA A 147 REMARK 465 LYS A 148 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 6 CG CD OE1 OE2 REMARK 470 ARG A 74 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 75 CG CD CE NZ REMARK 470 MET A 76 CG SD CE REMARK 470 LYS A 77 CG CD CE NZ REMARK 470 ASP A 78 CG OD1 OD2 REMARK 470 THR A 79 CB OG1 CG2 REMARK 470 SER A 81 OG REMARK 470 GLU A 83 CD OE1 OE2 REMARK 470 LYS A 115 CG CD CE NZ REMARK 470 GLU A 123 CG CD OE1 OE2 REMARK 470 GLU A 127 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 39 31.12 -96.76 REMARK 500 ASP A 56 78.56 -67.82 REMARK 500 ASP A 80 171.03 -44.41 REMARK 500 ASP A 93 74.07 -62.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 149 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 20 OD1 REMARK 620 2 ASP A 22 OD1 75.9 REMARK 620 3 ASP A 22 OD2 115.8 40.0 REMARK 620 4 ASP A 24 OD1 77.2 72.5 78.9 REMARK 620 5 THR A 26 O 85.7 151.7 147.3 82.7 REMARK 620 6 GLU A 31 OE1 113.8 134.3 115.0 151.8 72.8 REMARK 620 7 GLU A 31 OE2 105.8 77.9 71.6 148.6 128.4 56.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 150 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 56 OD1 REMARK 620 2 ASP A 58 OD1 82.7 REMARK 620 3 ASN A 60 OD1 72.8 81.3 REMARK 620 4 ASN A 60 ND2 121.3 65.6 55.3 REMARK 620 5 THR A 62 O 75.5 143.1 64.0 101.2 REMARK 620 6 GLU A 67 OE1 87.1 120.4 148.7 151.4 88.2 REMARK 620 7 GLU A 67 OE2 101.0 68.1 149.4 109.7 144.9 56.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 151 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 93 OD1 REMARK 620 2 ASP A 95 OD1 61.9 REMARK 620 3 ASP A 95 OD2 110.1 53.4 REMARK 620 4 ASN A 97 OD1 84.9 68.4 93.6 REMARK 620 5 TYR A 99 O 106.9 149.2 142.3 82.5 REMARK 620 6 GLU A 104 OE1 105.6 140.5 107.3 151.0 68.6 REMARK 620 7 GLU A 104 OE2 80.0 84.9 71.4 153.2 123.0 55.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 152 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 129 OD1 REMARK 620 2 ASP A 131 OD1 75.4 REMARK 620 3 ASP A 133 OD1 85.7 74.9 REMARK 620 4 GLN A 135 O 82.3 149.1 82.5 REMARK 620 5 GLU A 140 OE2 82.9 71.9 146.7 126.4 REMARK 620 6 GLU A 140 OE1 114.3 124.7 153.9 83.8 57.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 149 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DPD A 153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DPD A 154 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LIN RELATED DB: PDB REMARK 900 RELATED ID: 1QIW RELATED DB: PDB DBREF 1QIV A 1 148 UNP P02593 CALM_HUMAN 1 148 SEQRES 1 A 148 ALA ASP GLN LEU THR GLU GLU GLN ILE ALA GLU PHE LYS SEQRES 2 A 148 GLU ALA PHE SER LEU PHE ASP LYS ASP GLY ASP GLY THR SEQRES 3 A 148 ILE THR THR LYS GLU LEU GLY THR VAL MET ARG SER LEU SEQRES 4 A 148 GLY GLN ASN PRO THR GLU ALA GLU LEU GLN ASP MET ILE SEQRES 5 A 148 ASN GLU VAL ASP ALA ASP GLY ASN GLY THR ILE ASP PHE SEQRES 6 A 148 PRO GLU PHE LEU THR MET MET ALA ARG LYS MET LYS ASP SEQRES 7 A 148 THR ASP SER GLU GLU GLU ILE ARG GLU ALA PHE ARG VAL SEQRES 8 A 148 PHE ASP LYS ASP GLY ASN GLY TYR ILE SER ALA ALA GLU SEQRES 9 A 148 LEU ARG HIS VAL MET THR ASN LEU GLY GLU LYS LEU THR SEQRES 10 A 148 ASP GLU GLU VAL ASP GLU MET ILE ARG GLU ALA ASP ILE SEQRES 11 A 148 ASP GLY ASP GLY GLN VAL ASN TYR GLU GLU PHE VAL GLN SEQRES 12 A 148 MET MET THR ALA LYS HET CA A 149 1 HET CA A 150 1 HET CA A 151 1 HET CA A 152 1 HET DPD A 153 38 HET DPD A 154 38 HETNAM CA CALCIUM ION HETNAM DPD N-(3,3,-DIPHENYLPROPYL)-N'-[1-R-(2 3,4-BIS- HETNAM 2 DPD BUTOXYPHENYL)-ETHYL]-PROPYLENEDIAMINE FORMUL 2 CA 4(CA 2+) FORMUL 6 DPD 2(C34 H48 N2 O2) HELIX 1 1 THR A 5 ASP A 20 1 16 HELIX 2 2 THR A 28 LEU A 39 1 12 HELIX 3 3 THR A 44 ASP A 56 1 13 HELIX 4 4 PHE A 65 ARG A 74 1 10 HELIX 5 5 SER A 81 ASP A 93 1 13 HELIX 6 6 SER A 101 LEU A 112 1 12 HELIX 7 7 THR A 117 ASP A 129 1 13 HELIX 8 8 ASN A 137 THR A 146 1 10 SHEET 1 A 2 THR A 26 ILE A 27 0 SHEET 2 A 2 ILE A 63 ASP A 64 -1 O ILE A 63 N ILE A 27 LINK OD1 ASP A 20 CA CA A 149 1555 1555 2.28 LINK OD1 ASP A 22 CA CA A 149 1555 1555 2.31 LINK OD2 ASP A 22 CA CA A 149 1555 1555 3.38 LINK OD1 ASP A 24 CA CA A 149 1555 1555 2.33 LINK O THR A 26 CA CA A 149 1555 1555 2.28 LINK OE1 GLU A 31 CA CA A 149 1555 1555 2.34 LINK OE2 GLU A 31 CA CA A 149 1555 1555 2.30 LINK OD1 ASP A 56 CA CA A 150 1555 1555 2.29 LINK OD1 ASP A 58 CA CA A 150 1555 1555 2.31 LINK OD1 ASN A 60 CA CA A 150 1555 1555 2.31 LINK ND2 ASN A 60 CA CA A 150 1555 1555 2.53 LINK O THR A 62 CA CA A 150 1555 1555 2.31 LINK OE1 GLU A 67 CA CA A 150 1555 1555 2.31 LINK OE2 GLU A 67 CA CA A 150 1555 1555 2.32 LINK OD1 ASP A 93 CA CA A 151 1555 1555 2.30 LINK OD1 ASP A 95 CA CA A 151 1555 1555 2.31 LINK OD2 ASP A 95 CA CA A 151 1555 1555 2.55 LINK OD1 ASN A 97 CA CA A 151 1555 1555 2.33 LINK O TYR A 99 CA CA A 151 1555 1555 2.30 LINK OE1 GLU A 104 CA CA A 151 1555 1555 2.34 LINK OE2 GLU A 104 CA CA A 151 1555 1555 2.34 LINK OD1 ASP A 129 CA CA A 152 1555 1555 2.29 LINK OD1 ASP A 131 CA CA A 152 1555 1555 2.33 LINK OD1 ASP A 133 CA CA A 152 1555 1555 2.30 LINK O GLN A 135 CA CA A 152 1555 1555 2.29 LINK OE2 GLU A 140 CA CA A 152 1555 1555 2.30 LINK OE1 GLU A 140 CA CA A 152 1555 1555 2.30 SITE 1 AC1 5 ASP A 20 ASP A 22 ASP A 24 THR A 26 SITE 2 AC1 5 GLU A 31 SITE 1 AC2 5 ASP A 56 ASP A 58 ASN A 60 THR A 62 SITE 2 AC2 5 GLU A 67 SITE 1 AC3 5 ASP A 93 ASP A 95 ASN A 97 TYR A 99 SITE 2 AC3 5 GLU A 104 SITE 1 AC4 5 ASP A 129 ASP A 131 ASP A 133 GLN A 135 SITE 2 AC4 5 GLU A 140 SITE 1 AC5 8 PHE A 19 GLN A 41 PHE A 68 MET A 71 SITE 2 AC5 8 MET A 72 VAL A 91 MET A 145 DPD A 154 SITE 1 AC6 8 ALA A 15 MET A 72 LEU A 105 MET A 109 SITE 2 AC6 8 MET A 124 MET A 144 MET A 145 DPD A 153 CRYST1 40.125 40.125 173.814 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024922 0.014389 0.000000 0.00000 SCALE2 0.000000 0.028777 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005753 0.00000