PDB Short entry for 1QN7
HEADER    TATA BOX-BINDING PROTEIN (TBP)          14-OCT-99   1QN7              
TITLE     CRYSTAL STRUCTURE OF THE T(-27) ADENOVIRUS MAJOR LATE                 
TITLE    2 PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP                     
TITLE    3 (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT                   
TITLE    4 RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN                 
TITLE    5 CONSERVED THROUGHOUT EVOLUTION.                                      
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: TRANSCRIPTION INITIATION FACTOR TFIID-1;                   
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 SYNONYM: TATA-BOX FACTOR 1, TATA SEQUENCE-BINDING PROTEIN            
COMPND   5  1, TBP1;                                                            
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 MOL_ID: 2;                                                           
COMPND   8 MOLECULE: DNA                                                        
COMPND   9  (5'-D(*GP*CP*TP*AP*TP*AP*TP*AP*AP*GP*GP*GP*CP*A)-3');               
COMPND  10 CHAIN: C, E;                                                         
COMPND  11 MOL_ID: 3;                                                           
COMPND  12 MOLECULE: DNA                                                        
COMPND  13  (5'-D(*TP*GP*CP*CP*CP*TP*TP*AP*TP*AP*TP*AP*GP*C)-3');               
COMPND  14 CHAIN: D, F                                                          
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA;                           
SOURCE   3 ORGANISM_COMMON: MOUSE-EAR CRESS;                                    
SOURCE   4 ORGANISM_TAXID: 3702;                                                
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 MOL_ID: 2;                                                           
SOURCE   8 SYNTHETIC: YES;                                                      
SOURCE   9 MOL_ID: 3;                                                           
SOURCE  10 SYNTHETIC: YES                                                       
KEYWDS    TATA BOX-BINDING PROTEIN (TBP), ADENOVIRUS MAJOR LATE                 
KEYWDS   2 PROMOTER (ADMLP) TATA BOX, TBP-TATA ELEMENT COMPLEXES, T             
KEYWDS   3 (- 27) TATA BOX VARIANT                                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    G.A.PATIKOGLOU,J.L.KIM,L.SUN,S.-H.YANG,T.KODADEK,S.K.BURLEY           
REVDAT   3   24-FEB-09 1QN7    1       VERSN                                    
REVDAT   2   14-JUN-06 1QN7    1       ATOM                                     
REVDAT   1   07-FEB-00 1QN7    0                                                
JRNL        AUTH   G.A.PATIKOGLOU,J.L.KIM,L.SUN,S.-H.YANG,T.KODADEK,            
JRNL        AUTH 2 S.K.BURLEY                                                   
JRNL        TITL   TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING             
JRNL        TITL 2 PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION              
JRNL        REF    GENES DEV.                    V.  13  3217 1999              
JRNL        REFN                   ISSN 0890-9369                               
JRNL        PMID   10617571                                                     
JRNL        DOI    10.1101/GAD.13.24.3217                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.3  ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : X-PLOR                                               
REMARK   3   AUTHORS     : BRUNGER                                              
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.3                            
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 6                              
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 2                              
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 96.2                           
REMARK   3   NUMBER OF REFLECTIONS             : 27681                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : .194                            
REMARK   3   FREE R VALUE                     : .263                            
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 10.0                            
REMARK   3   FREE R VALUE TEST SET COUNT      : 2481                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : NULL                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : NULL                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : NULL                         
REMARK   3   BIN FREE R VALUE                    : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : NULL                         
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2911                                    
REMARK   3   NUCLEIC ACID ATOMS       : 1134                                    
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 263                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : NULL                            
REMARK   3   ESD FROM SIGMAA              (A) : NULL                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : NULL                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : .009                            
REMARK   3   BOND ANGLES            (DEGREES) : 1.4                             
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : NULL                            
REMARK   3   IMPROPER ANGLES        (DEGREES) : NULL                            
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : NULL                                      
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : NULL                                           
REMARK   3  PARAMETER FILE  2  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3  TOPOLOGY FILE  2   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1QN7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-OCT-99.                  
REMARK 100 THE PDBE ID CODE IS EBI-4266.                                        
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : NULL                               
REMARK 200  TEMPERATURE           (KELVIN) : 100.0                              
REMARK 200  PH                             : 6.00                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : CHESS                              
REMARK 200  BEAMLINE                       : F-1                                
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9200                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : AREA DETECTOR                      
REMARK 200  DETECTOR MANUFACTURER          : NULL                               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 30019                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.300                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 15.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 96.2                               
REMARK 200  DATA REDUNDANCY                : 3.900                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.05800                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : NULL                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER                        
REMARK 200 SOFTWARE USED: X-PLOR                                                
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): NULL                                      
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: NULL                                     
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       73.35000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY.  THE REMARK MAY ALSO PROVIDE INFORMATION ON              
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 GENERATING THE BIOMOLECULE                                           
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE:  1                                                      
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 TOTAL BURIED SURFACE AREA: 4780 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 15170 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.2 KCAL/MOL                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE:  2                                                      
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 TOTAL BURIED SURFACE AREA: 4810 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 14900 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.7 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 400                                                                      
REMARK 400 COMPOUND                                                             
REMARK 400  DNA MOLECULES BOUND WITHIN THE SERIES                               
REMARK 400                                                                      
REMARK 400         CHAIN C, E        CHAIN D, F                                 
REMARK 400   1QN3 GCTATAAACGGGCA   TGCCCGTTTATAGC                               
REMARK 400   1QN4 GCTATAAAATGGCA   TGCCATTTTATAGC                               
REMARK 400   1QN5 GCTATAAGAGGGCA   TGCCCTCTTATAGC                               
REMARK 400   1QN6 GCTATAATAGGGCA   TGCCCTATTATAGC                               
REMARK 400   1QN7 GCTATATAAGGGCA   TGCCCTTATATAGC                               
REMARK 400   1QN8 GCTATTAAAGGGCA   TGCCCTTTAATAGC                               
REMARK 400   1QN9 GCTACAAAAGGGCA   TGCCCTTTTGTAGC                               
REMARK 400   1QNA GCTTTAAAAGGGCA   TGCCCTTTTAAAGC                               
REMARK 400   1QNB GCTATAAATGGGCA   TGCCCATTTATAGC                               
REMARK 400   1QNC GCAATAAAAGGGCA   TGCCCTTTTATTGC                               
REMARK 400   1QNE GCTATAAAAGGGCA   TGCCCTTTTATAGC                               
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     THR A     2                                                      
REMARK 465     ASP A     3                                                      
REMARK 465     GLN A     4                                                      
REMARK 465     GLY A     5                                                      
REMARK 465     LEU A     6                                                      
REMARK 465     GLU A     7                                                      
REMARK 465     GLY A     8                                                      
REMARK 465     SER A     9                                                      
REMARK 465     ASN A    10                                                      
REMARK 465     PRO A    11                                                      
REMARK 465     VAL A    12                                                      
REMARK 465     GLN A   199                                                      
REMARK 465     GLN A   200                                                      
REMARK 465     MET B     1                                                      
REMARK 465     THR B     2                                                      
REMARK 465     ASP B     3                                                      
REMARK 465     GLN B     4                                                      
REMARK 465     GLY B     5                                                      
REMARK 465     LEU B     6                                                      
REMARK 465     GLU B     7                                                      
REMARK 465     GLY B     8                                                      
REMARK 465     SER B     9                                                      
REMARK 465     ASN B    10                                                      
REMARK 465     PRO B    11                                                      
REMARK 465     ILE B   198                                                      
REMARK 465     GLN B   199                                                      
REMARK 465     GLN B   200                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ASN A  13    CG   OD1  OD2                                       
REMARK 470     ARG A  48    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ASN A  49    CG   OD1  ND2                                       
REMARK 470     LYS B  41    CG   CD   CE   NZ                                   
REMARK 470     ARG B  48    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU B 131    CG   CD   OE1  OE2                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500                                                                      
REMARK 500   NZ   LYS A   159     OE1  GLN B    46     1646      2.10           
REMARK 500   OE1  GLN B    46     NZ   LYS A   159     1656      2.10           
REMARK 500   NH1  ARG B    65     O6    DG C   211     1656      2.14           
REMARK 500   O6    DG C   211     NH1  ARG B    65     1646      2.14           
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DG C 201   O4' -  C1' -  N9  ANGL. DEV. =   3.1 DEGREES          
REMARK 500     DC C 202   O4' -  C1' -  N1  ANGL. DEV. =   2.2 DEGREES          
REMARK 500     DT C 203   C6  -  C5  -  C7  ANGL. DEV. =  -3.7 DEGREES          
REMARK 500     DA C 204   C5' -  C4' -  C3' ANGL. DEV. =  -8.6 DEGREES          
REMARK 500     DT C 205   C5' -  C4' -  C3' ANGL. DEV. =  -8.9 DEGREES          
REMARK 500     DT C 205   O4' -  C4' -  C3' ANGL. DEV. =  -4.2 DEGREES          
REMARK 500     DA C 206   C5' -  C4' -  C3' ANGL. DEV. =  -7.3 DEGREES          
REMARK 500     DT C 207   C6  -  C5  -  C7  ANGL. DEV. =  -3.9 DEGREES          
REMARK 500     DT C 207   O4' -  C4' -  C3' ANGL. DEV. =  -4.2 DEGREES          
REMARK 500     DA C 209   O4' -  C1' -  N9  ANGL. DEV. =   2.6 DEGREES          
REMARK 500     DG C 210   O4' -  C1' -  C2' ANGL. DEV. =  -5.0 DEGREES          
REMARK 500     DG C 212   O4' -  C1' -  C2' ANGL. DEV. =  -3.7 DEGREES          
REMARK 500     DG C 212   O4' -  C1' -  N9  ANGL. DEV. =   4.9 DEGREES          
REMARK 500     DC C 213   C1' -  O4' -  C4' ANGL. DEV. =  -6.2 DEGREES          
REMARK 500     DC C 213   O4' -  C1' -  C2' ANGL. DEV. =  -6.2 DEGREES          
REMARK 500     DC C 213   O4' -  C1' -  N1  ANGL. DEV. =   2.8 DEGREES          
REMARK 500     DA C 214   O4' -  C1' -  C2' ANGL. DEV. =  -3.4 DEGREES          
REMARK 500     DG D 216   O4' -  C1' -  C2' ANGL. DEV. =  -3.6 DEGREES          
REMARK 500     DG D 216   O4' -  C1' -  N9  ANGL. DEV. =   2.3 DEGREES          
REMARK 500     DC D 217   C1' -  O4' -  C4' ANGL. DEV. =  -7.6 DEGREES          
REMARK 500     DC D 217   O4' -  C1' -  N1  ANGL. DEV. =   3.7 DEGREES          
REMARK 500     DC D 217   O4' -  C4' -  C3' ANGL. DEV. =  -5.0 DEGREES          
REMARK 500     DC D 218   O4' -  C1' -  C2' ANGL. DEV. =  -3.7 DEGREES          
REMARK 500     DC D 218   O4' -  C1' -  N1  ANGL. DEV. =   3.2 DEGREES          
REMARK 500     DT D 220   C6  -  C5  -  C7  ANGL. DEV. =  -4.2 DEGREES          
REMARK 500     DT D 220   O4' -  C1' -  C2' ANGL. DEV. =  -3.2 DEGREES          
REMARK 500     DT D 221   C6  -  C5  -  C7  ANGL. DEV. =  -3.7 DEGREES          
REMARK 500     DT D 221   O4' -  C4' -  C3' ANGL. DEV. =  -4.0 DEGREES          
REMARK 500     DT D 223   C1' -  O4' -  C4' ANGL. DEV. =  -4.5 DEGREES          
REMARK 500     DT D 223   O4' -  C4' -  C3' ANGL. DEV. =  -4.5 DEGREES          
REMARK 500     DA D 224   O4' -  C1' -  N9  ANGL. DEV. =   2.2 DEGREES          
REMARK 500     DT D 225   C6  -  C5  -  C7  ANGL. DEV. =  -3.9 DEGREES          
REMARK 500     DG D 227   O4' -  C1' -  C2' ANGL. DEV. =  -4.0 DEGREES          
REMARK 500     DG D 227   O4' -  C1' -  N9  ANGL. DEV. =   4.2 DEGREES          
REMARK 500     DC D 228   O4' -  C1' -  C2' ANGL. DEV. =  -3.1 DEGREES          
REMARK 500     DG E 201   O4' -  C1' -  N9  ANGL. DEV. =   3.0 DEGREES          
REMARK 500     DG E 201   O4' -  C4' -  C3' ANGL. DEV. =  -5.5 DEGREES          
REMARK 500     DC E 202   C1' -  O4' -  C4' ANGL. DEV. =  -5.1 DEGREES          
REMARK 500     DC E 202   O4' -  C1' -  N1  ANGL. DEV. =   4.4 DEGREES          
REMARK 500     DC E 202   O4' -  C4' -  C3' ANGL. DEV. =  -5.4 DEGREES          
REMARK 500     DT E 203   C6  -  C5  -  C7  ANGL. DEV. =  -3.8 DEGREES          
REMARK 500     DA E 204   C5' -  C4' -  C3' ANGL. DEV. =  -8.0 DEGREES          
REMARK 500     DA E 206   C5' -  C4' -  C3' ANGL. DEV. =  -7.6 DEGREES          
REMARK 500     DT E 207   O4' -  C1' -  N1  ANGL. DEV. =   2.4 DEGREES          
REMARK 500     DT E 207   O4' -  C4' -  C3' ANGL. DEV. =  -4.6 DEGREES          
REMARK 500     DA E 209   O4' -  C1' -  N9  ANGL. DEV. =   3.2 DEGREES          
REMARK 500     DG E 210   O4' -  C1' -  N9  ANGL. DEV. =   3.3 DEGREES          
REMARK 500     DG E 211   O4' -  C1' -  C2' ANGL. DEV. =  -3.9 DEGREES          
REMARK 500     DG E 212   O4' -  C1' -  N9  ANGL. DEV. =   4.6 DEGREES          
REMARK 500     DC E 213   O4' -  C1' -  C2' ANGL. DEV. =  -5.0 DEGREES          
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      74 ANGLE DEVIATIONS                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASN A  49       49.84    -79.70                                   
REMARK 500    LYS A 109     -166.14   -109.36                                   
REMARK 500    CYS B  36      140.59   -177.07                                   
REMARK 500    ALA B  58       24.79    -74.92                                   
REMARK 500    LYS B 109     -159.75   -107.96                                   
REMARK 500    PHE B 110       68.98   -154.57                                   
REMARK 500    LYS B 125       31.08     71.54                                   
REMARK 500    SER B 142      100.94   -160.68                                   
REMARK 500    GLU B 144       79.68   -119.12                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1QN3   RELATED DB: PDB                                   
REMARK 900  CRYSTAL STRUCTURE OF THE C(-25) ADENOVIRUS MAJOR LATE               
REMARK 900  PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP                    
REMARK 900  (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT                  
REMARK 900  RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN                
REMARK 900  CONSERVED THROUGHOUT EVOLUTION.                                     
REMARK 900 RELATED ID: 1QN4   RELATED DB: PDB                                   
REMARK 900  CRYSTAL STRUCTURE OF THE T(-24) ADENOVIRUS MAJOR LATE               
REMARK 900  PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP                    
REMARK 900  (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT                  
REMARK 900  RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN                
REMARK 900  CONSERVED THROUGHOUT EVOLUTION.                                     
REMARK 900 RELATED ID: 1QN5   RELATED DB: PDB                                   
REMARK 900  CRYSTAL STRUCTURE OF THE G(-26) ADENOVIRUS MAJOR LATE               
REMARK 900  PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP                    
REMARK 900  (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT                  
REMARK 900  RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN                
REMARK 900  CONSERVED THROUGHOUT EVOLUTION.                                     
REMARK 900 RELATED ID: 1QN6   RELATED DB: PDB                                   
REMARK 900  CRYSTAL STRUCTURE OF THE T(-26) ADENOVIRUS MAJOR LATE               
REMARK 900  PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP                    
REMARK 900  (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT                  
REMARK 900  RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN                
REMARK 900  CONSERVED THROUGHOUT EVOLUTION.                                     
REMARK 900 RELATED ID: 1QN8   RELATED DB: PDB                                   
REMARK 900  CRYSTAL STRUCTURE OF THE T(-28) ADENOVIRUS MAJOR LATE               
REMARK 900  PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP                    
REMARK 900  (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT                  
REMARK 900  RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN                
REMARK 900  CONSERVED THROUGHOUT EVOLUTION.                                     
REMARK 900 RELATED ID: 1QN9   RELATED DB: PDB                                   
REMARK 900  CRYSTAL STRUCTURE OF THE C(-29) ADENOVIRUS MAJOR LATE               
REMARK 900  PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP                    
REMARK 900  (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT                  
REMARK 900  RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN                
REMARK 900  CONSERVED THROUGHOUT EVOLUTION.                                     
REMARK 900 RELATED ID: 1QNA   RELATED DB: PDB                                   
REMARK 900  CRYSTAL STRUCTURE OF THE T(-30) ADENOVIRUS MAJOR LATE               
REMARK 900  PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP                    
REMARK 900  (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT                  
REMARK 900  RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN                
REMARK 900  CONSERVED THROUGHOUT EVOLUTION.                                     
REMARK 900 RELATED ID: 1QNB   RELATED DB: PDB                                   
REMARK 900  CRYSTAL STRUCTURE OF THE T(-25) ADENOVIRUS MAJOR LATE               
REMARK 900  PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP                    
REMARK 900  (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT                  
REMARK 900  RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN                
REMARK 900  CONSERVED THROUGHOUT EVOLUTION.                                     
REMARK 900 RELATED ID: 1QNC   RELATED DB: PDB                                   
REMARK 900  CRYSTAL STRUCTURE OF THE A(-31) ADENOVIRUS MAJOR LATE               
REMARK 900  PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP                    
REMARK 900  (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT                  
REMARK 900  RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN                
REMARK 900  CONSERVED THROUGHOUT EVOLUTION.                                     
REMARK 900 RELATED ID: 1QNE   RELATED DB: PDB                                   
REMARK 900  CRYSTAL STRUCTURE OF THE ADENOVIRUS MAJOR LATE PROMOTER             
REMARK 900  TATA BOX BOUND TO WILD-TYPE TBP                                     
REMARK 900  (ARABIDOPSIS THALIANA TBP ISOFORM 2).                               
DBREF  1QN7 A    1   200  UNP    P28147   TF21_ARATH       1    200             
DBREF  1QN7 B    1   200  UNP    P28147   TF21_ARATH       1    200             
DBREF  1QN7 C  201   214  PDB    1QN7     1QN7           201    214             
DBREF  1QN7 D  215   228  PDB    1QN7     1QN7           215    228             
DBREF  1QN7 E  201   214  PDB    1QN7     1QN7           201    214             
DBREF  1QN7 F  215   228  PDB    1QN7     1QN7           215    228             
SEQRES   1 A  200  MET THR ASP GLN GLY LEU GLU GLY SER ASN PRO VAL ASP          
SEQRES   2 A  200  LEU SER LYS HIS PRO SER GLY ILE VAL PRO THR LEU GLN          
SEQRES   3 A  200  ASN ILE VAL SER THR VAL ASN LEU ASP CYS LYS LEU ASP          
SEQRES   4 A  200  LEU LYS ALA ILE ALA LEU GLN ALA ARG ASN ALA GLU TYR          
SEQRES   5 A  200  ASN PRO LYS ARG PHE ALA ALA VAL ILE MET ARG ILE ARG          
SEQRES   6 A  200  GLU PRO LYS THR THR ALA LEU ILE PHE ALA SER GLY LYS          
SEQRES   7 A  200  MET VAL CYS THR GLY ALA LYS SER GLU ASP PHE SER LYS          
SEQRES   8 A  200  MET ALA ALA ARG LYS TYR ALA ARG ILE VAL GLN LYS LEU          
SEQRES   9 A  200  GLY PHE PRO ALA LYS PHE LYS ASP PHE LYS ILE GLN ASN          
SEQRES  10 A  200  ILE VAL GLY SER CYS ASP VAL LYS PHE PRO ILE ARG LEU          
SEQRES  11 A  200  GLU GLY LEU ALA TYR SER HIS ALA ALA PHE SER SER TYR          
SEQRES  12 A  200  GLU PRO GLU LEU PHE PRO GLY LEU ILE TYR ARG MET LYS          
SEQRES  13 A  200  VAL PRO LYS ILE VAL LEU LEU ILE PHE VAL SER GLY LYS          
SEQRES  14 A  200  ILE VAL ILE THR GLY ALA LYS MET ARG ASP GLU THR TYR          
SEQRES  15 A  200  LYS ALA PHE GLU ASN ILE TYR PRO VAL LEU SER GLU PHE          
SEQRES  16 A  200  ARG LYS ILE GLN GLN                                          
SEQRES   1 B  200  MET THR ASP GLN GLY LEU GLU GLY SER ASN PRO VAL ASP          
SEQRES   2 B  200  LEU SER LYS HIS PRO SER GLY ILE VAL PRO THR LEU GLN          
SEQRES   3 B  200  ASN ILE VAL SER THR VAL ASN LEU ASP CYS LYS LEU ASP          
SEQRES   4 B  200  LEU LYS ALA ILE ALA LEU GLN ALA ARG ASN ALA GLU TYR          
SEQRES   5 B  200  ASN PRO LYS ARG PHE ALA ALA VAL ILE MET ARG ILE ARG          
SEQRES   6 B  200  GLU PRO LYS THR THR ALA LEU ILE PHE ALA SER GLY LYS          
SEQRES   7 B  200  MET VAL CYS THR GLY ALA LYS SER GLU ASP PHE SER LYS          
SEQRES   8 B  200  MET ALA ALA ARG LYS TYR ALA ARG ILE VAL GLN LYS LEU          
SEQRES   9 B  200  GLY PHE PRO ALA LYS PHE LYS ASP PHE LYS ILE GLN ASN          
SEQRES  10 B  200  ILE VAL GLY SER CYS ASP VAL LYS PHE PRO ILE ARG LEU          
SEQRES  11 B  200  GLU GLY LEU ALA TYR SER HIS ALA ALA PHE SER SER TYR          
SEQRES  12 B  200  GLU PRO GLU LEU PHE PRO GLY LEU ILE TYR ARG MET LYS          
SEQRES  13 B  200  VAL PRO LYS ILE VAL LEU LEU ILE PHE VAL SER GLY LYS          
SEQRES  14 B  200  ILE VAL ILE THR GLY ALA LYS MET ARG ASP GLU THR TYR          
SEQRES  15 B  200  LYS ALA PHE GLU ASN ILE TYR PRO VAL LEU SER GLU PHE          
SEQRES  16 B  200  ARG LYS ILE GLN GLN                                          
SEQRES   1 C   14   DG  DC  DT  DA  DT  DA  DT  DA  DA  DG  DG  DG  DC          
SEQRES   2 C   14   DA                                                          
SEQRES   1 D   14   DT  DG  DC  DC  DC  DT  DT  DA  DT  DA  DT  DA  DG          
SEQRES   2 D   14   DC                                                          
SEQRES   1 E   14   DG  DC  DT  DA  DT  DA  DT  DA  DA  DG  DG  DG  DC          
SEQRES   2 E   14   DA                                                          
SEQRES   1 F   14   DT  DG  DC  DC  DC  DT  DT  DA  DT  DA  DT  DA  DG          
SEQRES   2 F   14   DC                                                          
FORMUL   7  HOH   *263(H2 O1)                                                   
HELIX    1   1 ASP A   39  ALA A   47  1                                   9    
HELIX    2   2 SER A   86  LYS A  103  1                                  18    
HELIX    3   3 ARG A  129  HIS A  137  1                                   9    
HELIX    4   4 MET A  177  PHE A  195  1                                  19    
HELIX    5   5 ASP B   39  ALA B   47  1                                   9    
HELIX    6   6 SER B   86  LEU B  104  1                                  19    
HELIX    7   7 ARG B  129  HIS B  137  1                                   9    
HELIX    8   8 MET B  177  SER B  193  1                                  17    
SHEET    1   A 5 SER A  30  ASN A  33  0                                        
SHEET    2   A 5 LYS A  78  THR A  82 -1  N  CYS A  81   O  SER A  30           
SHEET    3   A 5 THR A  69  ILE A  73 -1  N  LEU A  72   O  VAL A  80           
SHEET    4   A 5 VAL A  60  ILE A  64 -1  N  ILE A  64   O  THR A  69           
SHEET    5   A 5 ALA A  50  TYR A  52 -1  N  GLU A  51   O  ILE A  61           
SHEET    1   B 5 LEU A 151  MET A 155  0                                        
SHEET    2   B 5 ILE A 160  ILE A 164 -1  N  ILE A 164   O  LEU A 151           
SHEET    3   B 5 LYS A 169  ALA A 175 -1  N  THR A 173   O  VAL A 161           
SHEET    4   B 5 ASN A 117  ASP A 123 -1  N  CYS A 122   O  ILE A 170           
SHEET    5   B 5 THR A  24  VAL A  29 -1  N  VAL A  29   O  ASN A 117           
SHEET    1   C 4 SER B  30  ASN B  33  0                                        
SHEET    2   C 4 LYS B  78  THR B  82 -1  N  CYS B  81   O  SER B  30           
SHEET    3   C 4 THR B  69  PHE B  74 -1  N  LEU B  72   O  VAL B  80           
SHEET    4   C 4 ALA B  59  ILE B  64 -1  N  ILE B  64   O  THR B  69           
SHEET    1   D 5 LEU B 151  MET B 155  0                                        
SHEET    2   D 5 ILE B 160  ILE B 164 -1  N  ILE B 164   O  LEU B 151           
SHEET    3   D 5 LYS B 169  ALA B 175 -1  N  THR B 173   O  VAL B 161           
SHEET    4   D 5 ASN B 117  ASP B 123 -1  N  CYS B 122   O  ILE B 170           
SHEET    5   D 5 THR B  24  VAL B  29 -1  N  VAL B  29   O  ASN B 117           
CISPEP   1 GLU A   66    PRO A   67          0        -0.50                     
CISPEP   2 VAL A  157    PRO A  158          0        -0.62                     
CISPEP   3 GLU B   66    PRO B   67          0        -0.37                     
CISPEP   4 VAL B  157    PRO B  158          0        -0.47                     
CRYST1   41.800  146.700   57.400  90.00  90.50  90.00 P 1 21 1      4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.023923  0.000000  0.000209        0.00000                         
SCALE2      0.000000  0.006817  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.017422        0.00000                         
MTRIX1   1  0.999990  0.001720 -0.002890        8.99841    1                    
MTRIX2   1  0.001760 -0.999890  0.014620      -88.32040    1                    
MTRIX3   1 -0.002870 -0.014630 -0.999890      217.52924    1