PDB Short entry for 1QP9 HEADER TRANSCRIPTION/DNA 01-JUN-99 1QP9 TITLE STRUCTURE OF HAP1-PC7 COMPLEXED TO THE UAS OF CYC7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'- COMPND 3 D(*AP*CP*GP*CP*TP*AP*TP*TP*AP*TP*CP*GP*CP*TP*AP*TP*TP*AP*GP*T)-3'); COMPND 4 CHAIN: E, G; COMPND 5 SYNONYM: DNA TARGET OF CYC7; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'- COMPND 9 D(*AP*CP*TP*AP*AP*TP*AP*GP*CP*GP*AP*TP*AP*AP*TP*AP*GP*CP*GP*T)-3'); COMPND 10 CHAIN: F, H; COMPND 11 SYNONYM: DNA TARGET OF CYC7; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: CYP1(HAP1-PC7) ACTIVATORY PROTEIN; COMPND 15 CHAIN: A, B, C, D; COMPND 16 FRAGMENT: HAP1-PC7 DNA BINDING DOMAIN, RESIDUES 55-130; COMPND 17 ENGINEERED: YES; COMPND 18 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: SEQUENCE NATURALLY OCCURING IN YEAST; SOURCE 4 MOL_ID: 2; SOURCE 5 SYNTHETIC: YES; SOURCE 6 OTHER_DETAILS: SEQUENCE NATURALLY OCCURING IN YEAST; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 9 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 10 ORGANISM_TAXID: 4932; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 14 EXPRESSION_SYSTEM_PLASMID: PRSET-A KEYWDS ZINC BINUCLEAR CLUSTER, COILED-COIL, HEPTAD REPEAT, TRANSCRIPTION-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.LUKENS,D.KING,R.MARMORSTEIN REVDAT 5 14-FEB-24 1QP9 1 REMARK REVDAT 4 03-NOV-21 1QP9 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 1QP9 1 VERSN REVDAT 2 01-APR-03 1QP9 1 JRNL REVDAT 1 09-OCT-00 1QP9 0 JRNL AUTH A.K.LUKENS,D.A.KING,R.MARMORSTEIN JRNL TITL STRUCTURE OF HAP1-PC7 BOUND TO DNA: IMPLICATIONS FOR DNA JRNL TITL 2 RECOGNITION AND ALLOSTERIC EFFECTS OF DNA-BINDING ON JRNL TITL 3 TRANSCRIPTIONAL ACTIVATION. JRNL REF NUCLEIC ACIDS RES. V. 28 3853 2000 JRNL REFN ISSN 0305-1048 JRNL PMID 11024163 JRNL DOI 10.1093/NAR/28.20.3853 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.KING,L.ZHANG,L.GUARENTE,R.MARMORSTEIN REMARK 1 TITL STRUCTURE OF A HAP1-DNA COMPLEX REVEALS DRAMATICALLY REMARK 1 TITL 2 ASYMMETRIC DNA BINDING BY A HOMODIMERIC PROTEIN REMARK 1 REF NAT.STRUCT.BIOL. V. 6 64 1999 REMARK 1 REFN ISSN 1072-8368 REMARK 1 DOI 10.1038/4940 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.KING,L.ZHANG,L.GUARENTE,R.MARMORSTEIN REMARK 1 TITL STRUCTURE OF HAP-18-DNA IMPLICATES DIRECT ALLOSTERIC EFFECT REMARK 1 TITL 2 OF PROTEIN-DNA INTERACTIONS ON TRANSCRIPTIONAL ACTIVATION REMARK 1 REF NAT.STRUCT.BIOL. V. 6 22 1999 REMARK 1 REFN ISSN 1072-8368 REMARK 1 DOI 10.1038/4893 REMARK 1 REFERENCE 3 REMARK 1 AUTH D.KING REMARK 1 TITL ASYMMETRIC BINDING AND TRANSACTIVATION PROPERTIES OF THE REMARK 1 TITL 2 HAP1 DNA BINDING DOMAIN REMARK 1 REF THESIS 1999 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 18115 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.255 REMARK 3 FREE R VALUE : 0.294 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1812 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2438 REMARK 3 NUCLEIC ACID ATOMS : 1571 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 96 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 60.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.529 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1QP9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000009138. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-SEP-98 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.917 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27006 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 14.77 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.16700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11% PEG 400, 10 MM MGSO4, 200 MM KCL, REMARK 280 PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.95000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.25000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.25000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.95000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DA H 1 REMARK 465 DC H 2 REMARK 465 DT H 20 REMARK 465 ARG B 55 REMARK 465 LYS B 130 REMARK 465 ARG C 55 REMARK 465 LYS C 56 REMARK 465 ARG C 57 REMARK 465 SER C 129 REMARK 465 LYS C 130 REMARK 465 LYS D 130 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU B 114 CD1 CD2 REMARK 470 LEU D 114 CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC F 2 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT F 3 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 CYS B 84 CA - CB - SG ANGL. DEV. = 6.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 129 35.26 149.57 REMARK 500 ASN B 58 60.51 -113.42 REMARK 500 LYS B 71 34.45 71.13 REMARK 500 LEU B 77 152.14 -49.16 REMARK 500 ALA B 90 -59.67 -29.68 REMARK 500 THR B 127 3.46 -56.54 REMARK 500 LYS C 76 16.32 52.71 REMARK 500 LYS D 56 109.46 61.24 REMARK 500 ARG D 57 -156.00 -97.34 REMARK 500 LYS D 71 33.44 35.89 REMARK 500 VAL D 72 -156.14 -98.97 REMARK 500 CYS D 81 171.43 -50.36 REMARK 500 HIS D 91 19.21 -65.02 REMARK 500 TRP D 100 18.82 -66.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG F 8 0.06 SIDE CHAIN REMARK 500 DA F 13 0.05 SIDE CHAIN REMARK 500 DA H 7 0.05 SIDE CHAIN REMARK 500 DA H 16 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 131 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 64 SG REMARK 620 2 CYS A 67 SG 105.8 REMARK 620 3 CYS A 74 SG 112.4 105.6 REMARK 620 4 CYS A 81 SG 100.2 118.7 113.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 132 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 64 SG REMARK 620 2 CYS A 81 SG 101.7 REMARK 620 3 CYS A 84 SG 109.2 102.1 REMARK 620 4 CYS A 93 SG 117.6 111.3 113.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 131 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 64 SG REMARK 620 2 CYS B 67 SG 100.3 REMARK 620 3 CYS B 74 SG 116.3 111.5 REMARK 620 4 CYS B 81 SG 103.4 111.3 113.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 132 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 64 SG REMARK 620 2 CYS B 81 SG 103.6 REMARK 620 3 CYS B 84 SG 123.4 106.6 REMARK 620 4 CYS B 93 SG 104.9 111.4 107.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 133 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 80 NE2 REMARK 620 2 HIS B 91 ND1 99.5 REMARK 620 3 HIS D 80 NE2 96.3 122.3 REMARK 620 4 HIS D 91 ND1 124.9 115.4 98.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 131 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 64 SG REMARK 620 2 CYS C 67 SG 105.4 REMARK 620 3 CYS C 74 SG 111.6 108.5 REMARK 620 4 CYS C 81 SG 100.4 118.7 111.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 132 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 64 SG REMARK 620 2 CYS C 81 SG 100.7 REMARK 620 3 CYS C 84 SG 111.7 100.8 REMARK 620 4 CYS C 93 SG 116.8 113.3 112.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 131 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 64 SG REMARK 620 2 CYS D 67 SG 101.8 REMARK 620 3 CYS D 74 SG 112.3 111.0 REMARK 620 4 CYS D 81 SG 102.8 114.8 113.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 132 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 64 SG REMARK 620 2 CYS D 81 SG 102.4 REMARK 620 3 CYS D 84 SG 110.1 111.6 REMARK 620 4 CYS D 93 SG 106.3 106.4 118.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 131 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 131 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 131 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 131 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 133 DBREF 1QP9 A 55 130 UNP P12351 CYP1_YEAST 55 130 DBREF 1QP9 B 55 130 UNP P12351 CYP1_YEAST 55 130 DBREF 1QP9 C 55 130 UNP P12351 CYP1_YEAST 55 130 DBREF 1QP9 D 55 130 UNP P12351 CYP1_YEAST 55 130 DBREF 1QP9 E 1 20 PDB 1QP9 1QP9 1 20 DBREF 1QP9 F 1 20 PDB 1QP9 1QP9 1 20 DBREF 1QP9 G 1 20 PDB 1QP9 1QP9 1 20 DBREF 1QP9 H 1 20 PDB 1QP9 1QP9 1 20 SEQADV 1QP9 GLY A 63 UNP P12351 SER 63 ENGINEERED MUTATION SEQADV 1QP9 GLY B 63 UNP P12351 SER 63 ENGINEERED MUTATION SEQADV 1QP9 GLY C 63 UNP P12351 SER 63 ENGINEERED MUTATION SEQADV 1QP9 GLY D 63 UNP P12351 SER 63 ENGINEERED MUTATION SEQRES 1 E 20 DA DC DG DC DT DA DT DT DA DT DC DG DC SEQRES 2 E 20 DT DA DT DT DA DG DT SEQRES 1 F 20 DA DC DT DA DA DT DA DG DC DG DA DT DA SEQRES 2 F 20 DA DT DA DG DC DG DT SEQRES 1 G 20 DA DC DG DC DT DA DT DT DA DT DC DG DC SEQRES 2 G 20 DT DA DT DT DA DG DT SEQRES 1 H 20 DA DC DT DA DA DT DA DG DC DG DA DT DA SEQRES 2 H 20 DA DT DA DG DC DG DT SEQRES 1 A 76 ARG LYS ARG ASN ARG ILE PRO LEU GLY CYS THR ILE CYS SEQRES 2 A 76 ARG LYS ARG LYS VAL LYS CYS ASP LYS LEU ARG PRO HIS SEQRES 3 A 76 CYS GLN GLN CYS THR LYS THR GLY VAL ALA HIS LEU CYS SEQRES 4 A 76 HIS TYR MET GLU GLN THR TRP ALA GLU GLU ALA GLU LYS SEQRES 5 A 76 GLU LEU LEU LYS ASP ASN GLU LEU LYS LYS LEU ARG GLU SEQRES 6 A 76 ARG VAL LYS SER LEU GLU LYS THR LEU SER LYS SEQRES 1 B 76 ARG LYS ARG ASN ARG ILE PRO LEU GLY CYS THR ILE CYS SEQRES 2 B 76 ARG LYS ARG LYS VAL LYS CYS ASP LYS LEU ARG PRO HIS SEQRES 3 B 76 CYS GLN GLN CYS THR LYS THR GLY VAL ALA HIS LEU CYS SEQRES 4 B 76 HIS TYR MET GLU GLN THR TRP ALA GLU GLU ALA GLU LYS SEQRES 5 B 76 GLU LEU LEU LYS ASP ASN GLU LEU LYS LYS LEU ARG GLU SEQRES 6 B 76 ARG VAL LYS SER LEU GLU LYS THR LEU SER LYS SEQRES 1 C 76 ARG LYS ARG ASN ARG ILE PRO LEU GLY CYS THR ILE CYS SEQRES 2 C 76 ARG LYS ARG LYS VAL LYS CYS ASP LYS LEU ARG PRO HIS SEQRES 3 C 76 CYS GLN GLN CYS THR LYS THR GLY VAL ALA HIS LEU CYS SEQRES 4 C 76 HIS TYR MET GLU GLN THR TRP ALA GLU GLU ALA GLU LYS SEQRES 5 C 76 GLU LEU LEU LYS ASP ASN GLU LEU LYS LYS LEU ARG GLU SEQRES 6 C 76 ARG VAL LYS SER LEU GLU LYS THR LEU SER LYS SEQRES 1 D 76 ARG LYS ARG ASN ARG ILE PRO LEU GLY CYS THR ILE CYS SEQRES 2 D 76 ARG LYS ARG LYS VAL LYS CYS ASP LYS LEU ARG PRO HIS SEQRES 3 D 76 CYS GLN GLN CYS THR LYS THR GLY VAL ALA HIS LEU CYS SEQRES 4 D 76 HIS TYR MET GLU GLN THR TRP ALA GLU GLU ALA GLU LYS SEQRES 5 D 76 GLU LEU LEU LYS ASP ASN GLU LEU LYS LYS LEU ARG GLU SEQRES 6 D 76 ARG VAL LYS SER LEU GLU LYS THR LEU SER LYS HET ZN A 131 1 HET ZN A 132 1 HET ZN B 131 1 HET ZN B 132 1 HET ZN B 133 1 HET ZN C 131 1 HET ZN C 132 1 HET ZN D 131 1 HET ZN D 132 1 HETNAM ZN ZINC ION FORMUL 9 ZN 9(ZN 2+) FORMUL 18 HOH *96(H2 O) HELIX 1 1 CYS A 64 LYS A 71 1 8 HELIX 2 2 CYS A 81 THR A 87 1 7 HELIX 3 3 VAL A 89 CYS A 93 5 5 HELIX 4 4 THR A 99 LEU A 128 1 30 HELIX 5 5 CYS B 64 LYS B 71 1 8 HELIX 6 6 GLN B 82 THR B 87 1 6 HELIX 7 7 VAL B 89 CYS B 93 5 5 HELIX 8 8 GLN B 98 TRP B 100 5 3 HELIX 9 9 ALA B 101 THR B 127 1 27 HELIX 10 10 CYS C 64 ARG C 70 1 7 HELIX 11 11 CYS C 81 THR C 87 1 7 HELIX 12 12 GLY C 88 CYS C 93 5 6 HELIX 13 13 THR C 99 LEU C 128 1 30 HELIX 14 14 CYS D 64 ARG D 70 1 7 HELIX 15 15 CYS D 81 THR D 87 1 7 HELIX 16 16 VAL D 89 CYS D 93 5 5 HELIX 17 17 GLN D 98 TRP D 100 5 3 HELIX 18 18 ALA D 101 LEU D 128 1 28 LINK SG CYS A 64 ZN ZN A 131 1555 1555 2.34 LINK SG CYS A 64 ZN ZN A 132 1555 1555 2.27 LINK SG CYS A 67 ZN ZN A 131 1555 1555 2.30 LINK SG CYS A 74 ZN ZN A 131 1555 1555 2.32 LINK SG CYS A 81 ZN ZN A 131 1555 1555 2.32 LINK SG CYS A 81 ZN ZN A 132 1555 1555 2.35 LINK SG CYS A 84 ZN ZN A 132 1555 1555 2.37 LINK SG CYS A 93 ZN ZN A 132 1555 1555 2.30 LINK SG CYS B 64 ZN ZN B 131 1555 1555 2.36 LINK SG CYS B 64 ZN ZN B 132 1555 1555 2.35 LINK SG CYS B 67 ZN ZN B 131 1555 1555 2.43 LINK SG CYS B 74 ZN ZN B 131 1555 1555 2.31 LINK NE2 HIS B 80 ZN ZN B 133 1555 1555 2.13 LINK SG CYS B 81 ZN ZN B 131 1555 1555 2.33 LINK SG CYS B 81 ZN ZN B 132 1555 1555 2.34 LINK SG CYS B 84 ZN ZN B 132 1555 1555 2.30 LINK ND1 HIS B 91 ZN ZN B 133 1555 1555 1.89 LINK SG CYS B 93 ZN ZN B 132 1555 1555 2.34 LINK ZN ZN B 133 NE2 HIS D 80 1555 1555 1.92 LINK ZN ZN B 133 ND1 HIS D 91 1555 1555 2.22 LINK SG CYS C 64 ZN ZN C 131 1555 1555 2.36 LINK SG CYS C 64 ZN ZN C 132 1555 1555 2.33 LINK SG CYS C 67 ZN ZN C 131 1555 1555 2.28 LINK SG CYS C 74 ZN ZN C 131 1555 1555 2.32 LINK SG CYS C 81 ZN ZN C 131 1555 1555 2.32 LINK SG CYS C 81 ZN ZN C 132 1555 1555 2.34 LINK SG CYS C 84 ZN ZN C 132 1555 1555 2.31 LINK SG CYS C 93 ZN ZN C 132 1555 1555 2.25 LINK SG CYS D 64 ZN ZN D 131 1555 1555 2.30 LINK SG CYS D 64 ZN ZN D 132 1555 1555 2.34 LINK SG CYS D 67 ZN ZN D 131 1555 1555 2.34 LINK SG CYS D 74 ZN ZN D 131 1555 1555 2.30 LINK SG CYS D 81 ZN ZN D 131 1555 1555 2.36 LINK SG CYS D 81 ZN ZN D 132 1555 1555 2.33 LINK SG CYS D 84 ZN ZN D 132 1555 1555 2.33 LINK SG CYS D 93 ZN ZN D 132 1555 1555 2.32 CISPEP 1 ARG A 78 PRO A 79 0 1.33 CISPEP 2 ARG B 78 PRO B 79 0 0.43 CISPEP 3 ARG C 78 PRO C 79 0 -1.33 CISPEP 4 ARG D 78 PRO D 79 0 -0.73 SITE 1 AC1 5 CYS A 64 CYS A 67 CYS A 74 CYS A 81 SITE 2 AC1 5 ZN A 132 SITE 1 AC2 5 CYS A 64 CYS A 81 CYS A 84 CYS A 93 SITE 2 AC2 5 ZN A 131 SITE 1 AC3 5 CYS B 64 CYS B 67 CYS B 74 CYS B 81 SITE 2 AC3 5 ZN B 132 SITE 1 AC4 5 CYS B 64 CYS B 81 CYS B 84 CYS B 93 SITE 2 AC4 5 ZN B 131 SITE 1 AC5 5 CYS C 64 CYS C 67 CYS C 74 CYS C 81 SITE 2 AC5 5 ZN C 132 SITE 1 AC6 5 CYS C 64 CYS C 81 CYS C 84 CYS C 93 SITE 2 AC6 5 ZN C 131 SITE 1 AC7 5 CYS D 64 CYS D 67 CYS D 74 CYS D 81 SITE 2 AC7 5 ZN D 132 SITE 1 AC8 5 CYS D 64 CYS D 81 CYS D 84 CYS D 93 SITE 2 AC8 5 ZN D 131 SITE 1 AC9 4 HIS B 80 HIS B 91 HIS D 80 HIS D 91 CRYST1 85.900 90.900 96.500 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011641 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011001 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010363 0.00000