PDB Short entry for 1REI HEADER IMMUNOGLOBULIN(PART)SEQUESTERS ANTIGENS 17-MAR-76 1REI TITLE THE MOLECULAR STRUCTURE OF A DIMER COMPOSED OF THE VARIABLE PORTIONS TITLE 2 OF THE BENCE-JONES PROTEIN REI REFINED AT 2.0 ANGSTROMS RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: BENCE-JONES PROTEIN REI (LIGHT CHAIN); COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS IMMUNOGLOBULIN(PART)SEQUESTERS ANTIGENS EXPDTA X-RAY DIFFRACTION AUTHOR O.EPP,E.E.LATTMAN,P.COLMAN,H.FEHLHAMMER,W.BODE,M.SCHIFFER,R.HUBER, AUTHOR 2 W.PALM REVDAT 15 29-NOV-17 1REI 1 HELIX REVDAT 14 24-FEB-09 1REI 1 VERSN REVDAT 13 01-APR-03 1REI 1 JRNL REVDAT 12 17-FEB-84 1REI 1 JRNL REVDAT 11 30-SEP-83 1REI 1 REVDAT REVDAT 10 15-JAN-82 1REI 1 REMARK REVDAT 9 20-APR-81 1REI 1 SHEET REVDAT 8 31-DEC-80 1REI 1 REMARK REVDAT 7 14-FEB-80 1REI 3 CRYST1 REVDAT 6 24-MAY-78 1REI 1 COMPND REVDAT 5 24-JAN-78 1REI 1 HEADER REVDAT 4 01-NOV-77 1REI 1 COMPND SOURCE AUTHOR JRNL REVDAT 4 2 1 REMARK FORMUL SSBOND REVDAT 3 13-JUN-77 1REI 1 JRNL REMARK REVDAT 2 03-JAN-77 1REI 2 CONECT REVDAT 1 19-MAY-76 1REI 0 JRNL AUTH O.EPP,E.E.LATTMAN,M.SCHIFFER,R.HUBER,W.PALM JRNL TITL THE MOLECULAR STRUCTURE OF A DIMER COMPOSED OF THE VARIABLE JRNL TITL 2 PORTIONS OF THE BENCE-JONES PROTEIN REI REFINED AT 2.0-A JRNL TITL 3 RESOLUTION. JRNL REF BIOCHEMISTRY V. 14 4943 1975 JRNL REFN ISSN 0006-2960 JRNL PMID 1182131 JRNL DOI 10.1021/BI00693A025 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH O.EPP,P.COLMAN,H.FEHLHAMMER,W.BODE,M.SCHIFFER,R.HUBER,W.PALM REMARK 1 TITL CRYSTAL AND MOLECULAR STRUCTURE OF A DIMER COMPOSED OF THE REMARK 1 TITL 2 VARIABLE PORTIONS OF THE BENCE-JONES PROTEIN REI REMARK 1 REF EUR.J.BIOCHEM. V. 45 513 1974 REMARK 1 REFN ISSN 0014-2956 REMARK 1 REFERENCE 2 REMARK 1 EDIT R.J.FELDMANN REMARK 1 REF ATLAS OF MACROMOLECULAR 414 1976 REMARK 1 REF 2 STRUCTURE ON MICROFICHE REMARK 1 PUBL TRACOR JITCO INC.,ROCKVILLE,MD. REMARK 1 REFN REMARK 1 REFERENCE 3 REMARK 1 EDIT M.O.DAYHOFF REMARK 1 REF ATLAS OF PROTEIN SEQUENCE V. 5 180 1976 REMARK 1 REF 2 AND STRUCTURE,SUPPLEMENT 2 REMARK 1 PUBL NATIONAL BIOMEDICAL RESEARCH FOUNDATION, SILVER SPRING,MD. REMARK 1 REFN ISSN 0-912466-05-7 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1654 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 53 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE LOCAL DIAD IS NORMAL TO THE 6(1) AXIS AND INTERSECTS REMARK 3 IT 17.05 ANGSTROMS FROM THE Z=0 PLANE IN THE +Z DIRECTION. REMARK 3 WHEN PROJECTED ONTO THE Z=0 PLANE THE DIAD MAKES AN ANGLE REMARK 3 OF 102.5 DEGREES WITH THE +X AXIS AND 17.5 DEGREES WITH THE REMARK 3 +Y AXIS. REMARK 4 REMARK 4 1REI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000176054. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.73333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.46667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 49.10000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 81.83333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 16.36667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 1 O HOH B 221 0.79 REMARK 500 OD2 ASP A 1 O HOH A 250 1.09 REMARK 500 CG ASP A 1 O HOH A 250 1.65 REMARK 500 OE2 GLU A 50 O HOH A 255 1.68 REMARK 500 CG ASP B 1 O HOH B 221 1.87 REMARK 500 CB ASP A 1 O HOH A 250 1.92 REMARK 500 NH2 ARG A 61 OD1 ASP A 82 2.09 REMARK 500 OG SER A 52 O HOH A 257 2.15 REMARK 500 OG SER A 63 O HOH A 247 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASN A 34 CG ASN A 34 OD1 0.155 REMARK 500 TRP A 35 NE1 TRP A 35 CE2 -0.095 REMARK 500 ASN A 53 CG ASN A 53 OD1 0.152 REMARK 500 LEU A 54 N LEU A 54 CA 0.228 REMARK 500 LEU A 54 CA LEU A 54 CB -0.335 REMARK 500 ASN B 34 CG ASN B 34 OD1 0.153 REMARK 500 TRP B 35 NE1 TRP B 35 CE2 -0.095 REMARK 500 ASN B 53 CG ASN B 53 OD1 0.151 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 1 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 PRO A 8 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 SER A 12 N - CA - C ANGL. DEV. = 16.5 DEGREES REMARK 500 GLY A 16 N - CA - C ANGL. DEV. = 21.0 DEGREES REMARK 500 ASP A 17 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP A 28 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 LYS A 31 N - CA - C ANGL. DEV. = 16.6 DEGREES REMARK 500 PRO A 40 CB - CA - C ANGL. DEV. = 17.7 DEGREES REMARK 500 GLY A 41 N - CA - C ANGL. DEV. = 15.2 DEGREES REMARK 500 ALA A 43 N - CA - C ANGL. DEV. = -20.4 DEGREES REMARK 500 SER A 52 N - CA - C ANGL. DEV. = 16.9 DEGREES REMARK 500 LEU A 54 C - N - CA ANGL. DEV. = 15.4 DEGREES REMARK 500 LEU A 54 CB - CA - C ANGL. DEV. = 13.2 DEGREES REMARK 500 ARG A 61 CB - CA - C ANGL. DEV. = -12.9 DEGREES REMARK 500 ARG A 61 N - CA - C ANGL. DEV. = 19.4 DEGREES REMARK 500 SER A 67 N - CA - C ANGL. DEV. = -16.3 DEGREES REMARK 500 GLY A 68 N - CA - C ANGL. DEV. = 15.7 DEGREES REMARK 500 ASP A 70 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 PRO A 80 CB - CA - C ANGL. DEV. = 14.7 DEGREES REMARK 500 ASP A 82 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 PRO A 95 N - CA - C ANGL. DEV. = 24.9 DEGREES REMARK 500 ASP B 1 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 LEU B 11 N - CA - C ANGL. DEV. = -18.2 DEGREES REMARK 500 ASP B 17 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 SER B 26 CB - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 SER B 26 N - CA - C ANGL. DEV. = 27.7 DEGREES REMARK 500 ASP B 28 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 PRO B 40 CB - CA - C ANGL. DEV. = 14.4 DEGREES REMARK 500 ASP B 70 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP B 82 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 TYR B 96 N - CA - C ANGL. DEV. = -16.9 DEGREES REMARK 500 THR B 107 N - CA - C ANGL. DEV. = 16.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 8 -176.34 -65.29 REMARK 500 ASP A 28 107.77 -39.36 REMARK 500 ILE A 30 -77.94 79.25 REMARK 500 LYS A 31 20.85 -145.57 REMARK 500 PRO A 44 140.65 -34.20 REMARK 500 ALA A 51 -50.20 60.72 REMARK 500 LEU A 54 125.04 -32.79 REMARK 500 PRO B 8 -175.05 -64.26 REMARK 500 ILE B 30 -66.90 71.72 REMARK 500 LYS B 31 19.16 -164.58 REMARK 500 ALA B 51 -52.72 66.22 REMARK 500 ILE B 83 105.66 -57.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 14 VAL A 15 -147.55 REMARK 500 VAL A 15 GLY A 16 -146.42 REMARK 500 SER B 26 GLN B 27 146.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 61 0.24 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: HTN REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: HAPTEN BINDING SITE. IT OCCURS IN THE MONOMER REMARK 800 -MONOMER INTERACTION REGION DBREF 1REI A 1 107 UNP P01607 KV1O_HUMAN 1 107 DBREF 1REI B 1 107 UNP P01607 KV1O_HUMAN 1 107 SEQRES 1 A 107 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 A 107 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 A 107 GLN ASP ILE ILE LYS TYR LEU ASN TRP TYR GLN GLN THR SEQRES 4 A 107 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR GLU ALA SER SEQRES 5 A 107 ASN LEU GLN ALA GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 A 107 GLY SER GLY THR ASP TYR THR PHE THR ILE SER SER LEU SEQRES 7 A 107 GLN PRO GLU ASP ILE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 A 107 GLN SER LEU PRO TYR THR PHE GLY GLN GLY THR LYS LEU SEQRES 9 A 107 GLN ILE THR SEQRES 1 B 107 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 B 107 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 B 107 GLN ASP ILE ILE LYS TYR LEU ASN TRP TYR GLN GLN THR SEQRES 4 B 107 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR GLU ALA SER SEQRES 5 B 107 ASN LEU GLN ALA GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 B 107 GLY SER GLY THR ASP TYR THR PHE THR ILE SER SER LEU SEQRES 7 B 107 GLN PRO GLU ASP ILE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 B 107 GLN SER LEU PRO TYR THR PHE GLY GLN GLY THR LYS LEU SEQRES 9 B 107 GLN ILE THR FORMUL 3 HOH *53(H2 O) HELIX 1 1 GLN A 79 ILE A 83 5 5 HELIX 2 2 GLN B 79 ILE B 83 5 5 SHEET 1 AA 4 THR A 5 SER A 7 0 SHEET 2 AA 4 VAL A 19 GLN A 24 -1 O SER A 7 N THR A 22 SHEET 3 AA 4 TYR A 71 ILE A 75 -1 N CYS A 23 O TYR A 71 SHEET 4 AA 4 SER A 63 SER A 65 -1 N THR A 74 O SER A 63 SHEET 1 AB 5 SER A 9 ALA A 13 0 SHEET 2 AB 5 GLY A 99 THR A 107 1 O ALA A 13 N THR A 107 SHEET 3 AB 5 THR A 85 GLN A 89 -1 N GLY A 99 O CYS A 88 SHEET 4 AB 5 ASN A 34 GLN A 38 -1 O TYR A 36 N TYR A 87 SHEET 5 AB 5 ALA A 43 GLU A 50 -1 O GLN A 37 N LYS A 45 SHEET 1 BA 4 THR B 5 SER B 7 0 SHEET 2 BA 4 VAL B 19 GLN B 24 -1 O SER B 7 N THR B 22 SHEET 3 BA 4 TYR B 71 ILE B 75 -1 N ALA B 25 O THR B 69 SHEET 4 BA 4 SER B 63 SER B 65 -1 N THR B 74 O SER B 63 SHEET 1 BB 5 SER B 9 ALA B 13 0 SHEET 2 BB 5 GLY B 99 THR B 107 1 O ALA B 13 N THR B 107 SHEET 3 BB 5 THR B 85 GLN B 89 -1 N GLY B 99 O CYS B 88 SHEET 4 BB 5 ASN B 34 GLN B 38 -1 O TYR B 36 N TYR B 87 SHEET 5 BB 5 ALA B 43 GLU B 50 -1 O GLN B 37 N LYS B 45 SSBOND 1 CYS A 23 CYS A 88 1555 1555 2.00 SSBOND 2 CYS B 23 CYS B 88 1555 1555 2.01 CISPEP 1 SER A 7 PRO A 8 0 -23.38 CISPEP 2 LEU A 94 PRO A 95 0 -26.63 CISPEP 3 SER B 7 PRO B 8 0 -24.14 CISPEP 4 LEU B 94 PRO B 95 0 -3.80 SITE 1 HTN 18 TYR A 32 ASN A 34 TYR A 36 LEU A 46 SITE 2 HTN 18 TYR A 49 GLN A 89 TYR A 91 LEU A 94 SITE 3 HTN 18 TYR A 96 TYR B 32 ASN B 34 TYR B 36 SITE 4 HTN 18 LEU B 46 TYR B 49 GLN B 89 TYR B 91 SITE 5 HTN 18 LEU B 94 TYR B 96 CRYST1 75.800 75.800 98.200 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013190 0.007620 0.000000 0.00000 SCALE2 0.000000 0.015230 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010180 0.00000 MTRIX1 1 -0.910000 -0.415110 0.007000 -0.29750 1 MTRIX2 1 -0.413960 0.910000 0.025980 -0.29878 1 MTRIX3 1 -0.017000 0.021360 -1.000000 33.14600 1