PDB Short entry for 1RPW HEADER TRANSCRIPTION 03-DEC-03 1RPW TITLE CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING PROTEIN QACR BOUND TO THE TITLE 2 DIAMIDINE HEXAMIDINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR QACR; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: QACR, SAVP031; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: DH5ALPHA KEYWDS QACR HEXAMIDINE, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR D.S.MURRAY,M.A.SCHUMACHER,R.G.BRENNAN REVDAT 5 23-AUG-23 1RPW 1 REMARK REVDAT 4 27-OCT-21 1RPW 1 REMARK SEQADV REVDAT 3 02-JUN-09 1RPW 1 REMARK REVDAT 2 24-FEB-09 1RPW 1 VERSN REVDAT 1 01-JUN-04 1RPW 0 JRNL AUTH D.S.MURRAY,M.A.SCHUMACHER,R.G.BRENNAN JRNL TITL CRYSTAL STRUCTURES OF QACR-DIAMIDINE COMPLEXES REVEAL JRNL TITL 2 ADDITIONAL MULTIDRUG-BINDING MODES AND A NOVEL MECHANISM OF JRNL TITL 3 DRUG CHARGE NEUTRALIZATION. JRNL REF J.BIOL.CHEM. V. 279 14365 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 14726520 JRNL DOI 10.1074/JBC.M313870200 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1748928.270 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 31376 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1568 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4922 REMARK 3 BIN R VALUE (WORKING SET) : 0.3770 REMARK 3 BIN FREE R VALUE : 0.4260 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 242 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.027 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6188 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 126 REMARK 3 SOLVENT ATOMS : 19 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 1.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.19000 REMARK 3 B22 (A**2) : 5.19000 REMARK 3 B33 (A**2) : -10.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM SIGMAA (A) : 0.49 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.51 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.66 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 18.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.780 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.640 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.920 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.000 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.330 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 47.43 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : HEX.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : HEX.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1RPW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-03. REMARK 100 THE DEPOSITION ID IS D_1000020935. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.62 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31376 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 48.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : 0.05300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6624.000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.38000 REMARK 200 R SYM FOR SHELL (I) : 0.38000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: DIFFERENCE FOURIER METHODS REMARK 200 SOFTWARE USED: CNS 1.1 REMARK 200 STARTING MODEL: PDB ENTRY 1JT6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, SODIUM ACETATE, PH REMARK 280 4.62, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 85.90000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 85.90000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.25000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 85.90000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 85.90000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 47.25000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 85.90000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 85.90000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 47.25000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 85.90000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 85.90000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 47.25000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -176.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 188 REMARK 465 MET B 1 REMARK 465 LYS B 188 REMARK 465 MET C 1 REMARK 465 LYS C 188 REMARK 465 MET D 1 REMARK 465 LYS D 188 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CE1 HIS A 42 CE1 HIS A 42 8445 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 3 CA - CB - CG ANGL. DEV. = 15.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 3 -93.80 -83.64 REMARK 500 ASP A 5 43.92 -78.99 REMARK 500 LYS A 6 -38.40 -133.84 REMARK 500 ASN A 18 -167.31 -126.08 REMARK 500 GLU A 33 88.39 25.78 REMARK 500 SER A 34 -161.90 -165.90 REMARK 500 ASN A 38 -63.46 -27.56 REMARK 500 LEU A 39 59.83 -66.70 REMARK 500 TYR A 40 -39.29 -144.18 REMARK 500 LYS A 44 -94.90 -67.94 REMARK 500 GLU A 52 -70.38 -63.91 REMARK 500 LYS A 67 17.79 -68.92 REMARK 500 GLU A 68 -12.36 -148.90 REMARK 500 LYS A 71 18.38 -69.60 REMARK 500 THR A 89 -178.95 -49.99 REMARK 500 TYR A 92 -62.63 51.84 REMARK 500 THR A 104 37.35 -88.09 REMARK 500 GLU A 105 16.18 -161.88 REMARK 500 TYR A 106 25.76 -163.31 REMARK 500 ASN A 113 8.92 -61.27 REMARK 500 GLU A 114 -60.44 -107.71 REMARK 500 MET A 116 -9.37 -58.01 REMARK 500 HIS A 164 76.18 -60.11 REMARK 500 GLU A 165 18.03 167.26 REMARK 500 ASN A 167 111.98 -33.79 REMARK 500 SER B 34 -139.29 -109.02 REMARK 500 LYS B 44 -52.06 66.15 REMARK 500 THR B 104 45.94 -74.57 REMARK 500 GLU B 105 -4.33 -159.62 REMARK 500 TYR B 106 -3.46 -140.25 REMARK 500 TYR B 107 10.68 -68.67 REMARK 500 LEU B 136 7.76 -58.90 REMARK 500 HIS B 164 -64.69 1.61 REMARK 500 GLU C 33 88.86 69.80 REMARK 500 SER C 34 -157.94 -174.71 REMARK 500 LYS C 44 -68.16 85.00 REMARK 500 LYS C 60 16.03 -67.75 REMARK 500 TRP C 61 -53.68 -122.37 REMARK 500 LYS C 71 3.58 -58.08 REMARK 500 LYS C 73 -71.69 -66.37 REMARK 500 TYR C 92 -82.50 60.70 REMARK 500 TYR C 106 -10.73 -147.25 REMARK 500 LYS C 108 -83.07 -59.48 REMARK 500 THR C 109 98.34 -45.71 REMARK 500 ASN C 143 -74.10 -55.54 REMARK 500 ALA C 152 -73.17 -50.64 REMARK 500 THR C 163 27.91 -157.30 REMARK 500 GLU C 165 -68.92 -10.70 REMARK 500 LYS D 73 -79.31 -62.81 REMARK 500 TYR D 92 -59.68 53.90 REMARK 500 REMARK 500 THIS ENTRY HAS 61 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR B 40 0.08 SIDE CHAIN REMARK 500 TYR B 91 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 189 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 189 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 189 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 191 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 192 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 191 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 192 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 189 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 190 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 193 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 193 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 191 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 194 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 194 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 192 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DID B 193 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JT6 RELATED DB: PDB REMARK 900 QACR BOUND TO DEQUALINIUM REMARK 900 RELATED ID: 1JTY RELATED DB: PDB REMARK 900 QACR BOUND TO ETHIDIUM REMARK 900 RELATED ID: 1JUS RELATED DB: PDB REMARK 900 QACR BOUND TO RHODAMINE 6G DBREF 1RPW A 1 188 UNP P0A0N4 QACR_STAAU 1 188 DBREF 1RPW B 1 188 UNP P0A0N4 QACR_STAAU 1 188 DBREF 1RPW C 1 188 UNP P0A0N4 QACR_STAAU 1 188 DBREF 1RPW D 1 188 UNP P0A0N4 QACR_STAAU 1 188 SEQADV 1RPW ALA A 72 UNP P0A0N4 CYS 72 ENGINEERED MUTATION SEQADV 1RPW SER A 141 UNP P0A0N4 CYS 141 ENGINEERED MUTATION SEQADV 1RPW ALA B 72 UNP P0A0N4 CYS 72 ENGINEERED MUTATION SEQADV 1RPW SER B 141 UNP P0A0N4 CYS 141 ENGINEERED MUTATION SEQADV 1RPW ALA C 72 UNP P0A0N4 CYS 72 ENGINEERED MUTATION SEQADV 1RPW SER C 141 UNP P0A0N4 CYS 141 ENGINEERED MUTATION SEQADV 1RPW ALA D 72 UNP P0A0N4 CYS 72 ENGINEERED MUTATION SEQADV 1RPW SER D 141 UNP P0A0N4 CYS 141 ENGINEERED MUTATION SEQRES 1 A 188 MET ASN LEU LYS ASP LYS ILE LEU GLY VAL ALA LYS GLU SEQRES 2 A 188 LEU PHE ILE LYS ASN GLY TYR ASN ALA THR THR THR GLY SEQRES 3 A 188 GLU ILE VAL LYS LEU SER GLU SER SER LYS GLY ASN LEU SEQRES 4 A 188 TYR TYR HIS PHE LYS THR LYS GLU ASN LEU PHE LEU GLU SEQRES 5 A 188 ILE LEU ASN ILE GLU GLU SER LYS TRP GLN GLU GLN TRP SEQRES 6 A 188 LYS LYS GLU GLN ILE LYS ALA LYS THR ASN ARG GLU LYS SEQRES 7 A 188 PHE TYR LEU TYR ASN GLU LEU SER LEU THR THR GLU TYR SEQRES 8 A 188 TYR TYR PRO LEU GLN ASN ALA ILE ILE GLU PHE TYR THR SEQRES 9 A 188 GLU TYR TYR LYS THR ASN SER ILE ASN GLU LYS MET ASN SEQRES 10 A 188 LYS LEU GLU ASN LYS TYR ILE ASP ALA TYR HIS VAL ILE SEQRES 11 A 188 PHE LYS GLU GLY ASN LEU ASN GLY GLU TRP SER ILE ASN SEQRES 12 A 188 ASP VAL ASN ALA VAL SER LYS ILE ALA ALA ASN ALA VAL SEQRES 13 A 188 ASN GLY ILE VAL THR PHE THR HIS GLU GLN ASN ILE ASN SEQRES 14 A 188 GLU ARG ILE LYS LEU MET ASN LYS PHE SER GLN ILE PHE SEQRES 15 A 188 LEU ASN GLY LEU SER LYS SEQRES 1 B 188 MET ASN LEU LYS ASP LYS ILE LEU GLY VAL ALA LYS GLU SEQRES 2 B 188 LEU PHE ILE LYS ASN GLY TYR ASN ALA THR THR THR GLY SEQRES 3 B 188 GLU ILE VAL LYS LEU SER GLU SER SER LYS GLY ASN LEU SEQRES 4 B 188 TYR TYR HIS PHE LYS THR LYS GLU ASN LEU PHE LEU GLU SEQRES 5 B 188 ILE LEU ASN ILE GLU GLU SER LYS TRP GLN GLU GLN TRP SEQRES 6 B 188 LYS LYS GLU GLN ILE LYS ALA LYS THR ASN ARG GLU LYS SEQRES 7 B 188 PHE TYR LEU TYR ASN GLU LEU SER LEU THR THR GLU TYR SEQRES 8 B 188 TYR TYR PRO LEU GLN ASN ALA ILE ILE GLU PHE TYR THR SEQRES 9 B 188 GLU TYR TYR LYS THR ASN SER ILE ASN GLU LYS MET ASN SEQRES 10 B 188 LYS LEU GLU ASN LYS TYR ILE ASP ALA TYR HIS VAL ILE SEQRES 11 B 188 PHE LYS GLU GLY ASN LEU ASN GLY GLU TRP SER ILE ASN SEQRES 12 B 188 ASP VAL ASN ALA VAL SER LYS ILE ALA ALA ASN ALA VAL SEQRES 13 B 188 ASN GLY ILE VAL THR PHE THR HIS GLU GLN ASN ILE ASN SEQRES 14 B 188 GLU ARG ILE LYS LEU MET ASN LYS PHE SER GLN ILE PHE SEQRES 15 B 188 LEU ASN GLY LEU SER LYS SEQRES 1 C 188 MET ASN LEU LYS ASP LYS ILE LEU GLY VAL ALA LYS GLU SEQRES 2 C 188 LEU PHE ILE LYS ASN GLY TYR ASN ALA THR THR THR GLY SEQRES 3 C 188 GLU ILE VAL LYS LEU SER GLU SER SER LYS GLY ASN LEU SEQRES 4 C 188 TYR TYR HIS PHE LYS THR LYS GLU ASN LEU PHE LEU GLU SEQRES 5 C 188 ILE LEU ASN ILE GLU GLU SER LYS TRP GLN GLU GLN TRP SEQRES 6 C 188 LYS LYS GLU GLN ILE LYS ALA LYS THR ASN ARG GLU LYS SEQRES 7 C 188 PHE TYR LEU TYR ASN GLU LEU SER LEU THR THR GLU TYR SEQRES 8 C 188 TYR TYR PRO LEU GLN ASN ALA ILE ILE GLU PHE TYR THR SEQRES 9 C 188 GLU TYR TYR LYS THR ASN SER ILE ASN GLU LYS MET ASN SEQRES 10 C 188 LYS LEU GLU ASN LYS TYR ILE ASP ALA TYR HIS VAL ILE SEQRES 11 C 188 PHE LYS GLU GLY ASN LEU ASN GLY GLU TRP SER ILE ASN SEQRES 12 C 188 ASP VAL ASN ALA VAL SER LYS ILE ALA ALA ASN ALA VAL SEQRES 13 C 188 ASN GLY ILE VAL THR PHE THR HIS GLU GLN ASN ILE ASN SEQRES 14 C 188 GLU ARG ILE LYS LEU MET ASN LYS PHE SER GLN ILE PHE SEQRES 15 C 188 LEU ASN GLY LEU SER LYS SEQRES 1 D 188 MET ASN LEU LYS ASP LYS ILE LEU GLY VAL ALA LYS GLU SEQRES 2 D 188 LEU PHE ILE LYS ASN GLY TYR ASN ALA THR THR THR GLY SEQRES 3 D 188 GLU ILE VAL LYS LEU SER GLU SER SER LYS GLY ASN LEU SEQRES 4 D 188 TYR TYR HIS PHE LYS THR LYS GLU ASN LEU PHE LEU GLU SEQRES 5 D 188 ILE LEU ASN ILE GLU GLU SER LYS TRP GLN GLU GLN TRP SEQRES 6 D 188 LYS LYS GLU GLN ILE LYS ALA LYS THR ASN ARG GLU LYS SEQRES 7 D 188 PHE TYR LEU TYR ASN GLU LEU SER LEU THR THR GLU TYR SEQRES 8 D 188 TYR TYR PRO LEU GLN ASN ALA ILE ILE GLU PHE TYR THR SEQRES 9 D 188 GLU TYR TYR LYS THR ASN SER ILE ASN GLU LYS MET ASN SEQRES 10 D 188 LYS LEU GLU ASN LYS TYR ILE ASP ALA TYR HIS VAL ILE SEQRES 11 D 188 PHE LYS GLU GLY ASN LEU ASN GLY GLU TRP SER ILE ASN SEQRES 12 D 188 ASP VAL ASN ALA VAL SER LYS ILE ALA ALA ASN ALA VAL SEQRES 13 D 188 ASN GLY ILE VAL THR PHE THR HIS GLU GLN ASN ILE ASN SEQRES 14 D 188 GLU ARG ILE LYS LEU MET ASN LYS PHE SER GLN ILE PHE SEQRES 15 D 188 LEU ASN GLY LEU SER LYS HET SO4 A 189 5 HET SO4 A 190 5 HET SO4 B 189 5 HET SO4 B 190 5 HET SO4 B 191 5 HET SO4 B 192 5 HET DID B 193 26 HET SO4 C 189 5 HET SO4 C 190 5 HET SO4 C 191 5 HET SO4 C 192 5 HET SO4 C 193 5 HET SO4 C 194 5 HET SO4 D 189 5 HET SO4 D 190 5 HET SO4 D 191 5 HET SO4 D 192 5 HET SO4 D 193 5 HET SO4 D 194 5 HET SO4 D 195 5 HET SO4 D 196 5 HETNAM SO4 SULFATE ION HETNAM DID 4,4'[1,6-HEXANEDIYLBIS(OXY)]BISBENZENECARBOXIMIDAMIDE FORMUL 5 SO4 20(O4 S 2-) FORMUL 11 DID C20 H26 N4 O2 FORMUL 26 HOH *19(H2 O) HELIX 1 1 LEU A 3 ASN A 18 1 16 HELIX 2 2 THR A 24 SER A 32 1 9 HELIX 3 3 THR A 45 ILE A 70 1 26 HELIX 4 4 THR A 74 THR A 89 1 16 HELIX 5 5 TYR A 92 PRO A 94 5 3 HELIX 6 6 LEU A 95 THR A 104 1 10 HELIX 7 7 SER A 111 ASN A 137 1 27 HELIX 8 8 ASP A 144 PHE A 162 1 19 HELIX 9 9 ASN A 167 LEU A 186 1 20 HELIX 10 10 ASN B 2 THR B 23 1 22 HELIX 11 11 THR B 24 SER B 32 1 9 HELIX 12 12 SER B 35 LYS B 44 1 10 HELIX 13 13 THR B 45 GLN B 69 1 25 HELIX 14 14 ILE B 70 ALA B 72 5 3 HELIX 15 15 THR B 74 TYR B 92 1 19 HELIX 16 16 LEU B 95 THR B 104 1 10 HELIX 17 17 THR B 109 LEU B 136 1 28 HELIX 18 18 ASP B 144 PHE B 162 1 19 HELIX 19 19 ASN B 167 GLY B 185 1 19 HELIX 20 20 LEU B 186 SER B 187 5 2 HELIX 21 21 ASN C 2 ASN C 2 5 1 HELIX 22 22 LEU C 3 ASN C 18 1 16 HELIX 23 23 THR C 24 GLU C 33 1 10 HELIX 24 24 SER C 35 LYS C 44 1 10 HELIX 25 25 THR C 45 GLU C 63 1 19 HELIX 26 26 GLU C 68 ALA C 72 5 5 HELIX 27 27 THR C 74 THR C 89 1 16 HELIX 28 28 TYR C 92 PRO C 94 5 3 HELIX 29 29 LEU C 95 GLU C 105 1 11 HELIX 30 30 THR C 109 ASN C 137 1 29 HELIX 31 31 ASP C 144 PHE C 162 1 19 HELIX 32 32 ASN C 167 SER C 187 1 21 HELIX 33 33 ASN D 2 GLY D 19 1 18 HELIX 34 34 THR D 24 SER D 32 1 9 HELIX 35 35 SER D 35 PHE D 43 1 9 HELIX 36 36 THR D 45 LYS D 71 1 27 HELIX 37 37 THR D 74 THR D 89 1 16 HELIX 38 38 TYR D 92 PRO D 94 5 3 HELIX 39 39 LEU D 95 TYR D 107 1 13 HELIX 40 40 THR D 109 LEU D 136 1 28 HELIX 41 41 ASP D 144 THR D 161 1 18 HELIX 42 42 ASN D 167 LEU D 186 1 20 SITE 1 AC1 2 LYS B 4 HIS B 42 SITE 1 AC2 5 THR C 25 TYR C 40 THR C 45 LYS C 46 SITE 2 AC2 5 SO4 C 192 SITE 1 AC3 4 THR D 24 GLY D 26 GLU D 27 LYS D 36 SITE 1 AC4 6 LYS A 66 ASN C 2 LEU C 3 LYS C 4 SITE 2 AC4 6 ASN C 38 HIS C 42 SITE 1 AC5 2 THR C 24 GLY C 26 SITE 1 AC6 4 LYS D 36 TYR D 40 THR D 45 LYS D 46 SITE 1 AC7 3 SER B 35 LYS B 36 LYS D 60 SITE 1 AC8 5 TYR C 20 LYS C 46 GLU C 105 TYR C 106 SITE 2 AC8 5 SO4 C 189 SITE 1 AC9 4 LYS D 12 ILE D 53 ILE D 56 GLU D 57 SITE 1 BC1 5 LYS B 36 TYR B 40 ASN D 2 ASP D 5 SITE 2 BC1 5 LYS D 6 SITE 1 BC2 5 GLN A 64 TYR A 91 GLN C 64 GLU C 90 SITE 2 BC2 5 TYR C 91 SITE 1 BC3 3 THR A 24 THR A 25 LYS A 46 SITE 1 BC4 2 HIS D 128 LYS D 132 SITE 1 BC5 3 GLU C 13 LYS C 17 LYS C 30 SITE 1 BC6 5 ASN B 2 LEU B 3 LYS B 4 ASN B 38 SITE 2 BC6 5 HIS B 42 SITE 1 BC7 4 LYS A 73 HIS C 164 GLU C 165 GLN C 166 SITE 1 BC8 2 TYR C 107 HIS D 164 SITE 1 BC9 3 ASP B 144 ASN B 146 ALA B 147 SITE 1 CC1 3 ASN D 135 SER D 141 ILE D 142 SITE 1 CC2 1 SER D 187 SITE 1 CC3 11 PHE A 162 GLU B 57 TRP B 61 GLN B 64 SITE 2 CC3 11 TYR B 93 GLU B 120 ILE B 124 ASN B 154 SITE 3 CC3 11 ASN B 157 HOH B 199 HOH B 200 CRYST1 171.800 171.800 94.500 90.00 90.00 90.00 P 42 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005821 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005821 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010582 0.00000