PDB Short entry for 1SAE
HEADER    ANTI-ONCOGENE                           12-MAR-95   1SAE              
TITLE     HIGH RESOLUTION SOLUTION NMR STRUCTURE OF THE OLIGOMERIZATION DOMAIN  
TITLE    2 OF P53 BY MULTI-DIMENSIONAL NMR (SAC STRUCTURES)                     
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: TUMOR SUPPRESSOR P53;                                      
COMPND   3 CHAIN: A, B, C, D;                                                   
COMPND   4 OTHER_DETAILS: SAC STRUCTURES 1 - 26                                 
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606                                                 
KEYWDS    ANTI-ONCOGENE                                                         
EXPDTA    SOLUTION NMR                                                          
NUMMDL    77                                                                    
AUTHOR    G.M.CLORE,J.G.OMICHINSKI,A.M.GRONENBORN                               
REVDAT   5   02-MAR-22 1SAE    1       REMARK                                   
REVDAT   4   24-FEB-09 1SAE    1       VERSN                                    
REVDAT   3   30-SEP-08 1SAE    1       SPRSDE                                   
REVDAT   2   01-APR-03 1SAE    1       JRNL                                     
REVDAT   1   15-OCT-95 1SAE    0                                                
SPRSDE     30-SEP-08 1SAE      1SAG 1SAI                                        
JRNL        AUTH   G.M.CLORE,J.ERNST,R.CLUBB,J.G.OMICHINSKI,W.M.KENNEDY,        
JRNL        AUTH 2 K.SAKAGUCHI,E.APPELLA,A.M.GRONENBORN                         
JRNL        TITL   REFINED SOLUTION STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF  
JRNL        TITL 2 THE TUMOUR SUPPRESSOR P53.                                   
JRNL        REF    NAT.STRUCT.BIOL.              V.   2   321 1995              
JRNL        REFN                   ISSN 1072-8368                               
JRNL        PMID   7796267                                                      
JRNL        DOI    10.1038/NSB0495-321                                          
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   G.M.CLORE,J.G.OMICHINSKI,K.SAKAGUCHI,N.ZAMBRANO,H.SAKAMOTO,  
REMARK   1  AUTH 2 E.APPELLA,A.M.GRONENBORN                                     
REMARK   1  TITL   INTERHELICAL ANGLES IN THE SOLUTION STRUCTURE OF THE         
REMARK   1  TITL 2 OLIGOMERIZATION DOMAIN OF P53: CORRECTION                    
REMARK   1  REF    SCIENCE                       V. 267  1515 1995              
REMARK   1  REFN                   ISSN 0036-8075                               
REMARK   1 REFERENCE 2                                                          
REMARK   1  AUTH   G.M.CLORE,J.G.OMICHINSKI,K.SAKAGUCHI,N.ZAMBRANO,H.SAKAMOTO,  
REMARK   1  AUTH 2 E.APPELLA,A.M.GRONENBORN                                     
REMARK   1  TITL   HIGH-RESOLUTION STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF   
REMARK   1  TITL 2 P53 BY MULTIDIMENSIONAL NMR                                  
REMARK   1  REF    SCIENCE                       V. 265   386 1994              
REMARK   1  REFN                   ISSN 0036-8075                               
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : NULL                                                 
REMARK   3   AUTHORS     : NULL                                                 
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS:                                           
REMARK   3  THE 3D STRUCTURE OF THE OLIGOMERIZATION DOMAIN (RESIDUES            
REMARK   3  319 - 360) OF P53 BY MULTI-DIMENSIONAL HETERONUCLEAR-EDITED         
REMARK   3  AND -FILTERED NMR IS BASED ON 4472 EXPERIMENTAL RESTRAINTS          
REMARK   3  COMPRISING THE FOLLOWING INTRA- AND INTER-SUBUNIT                   
REMARK   3  RESTRAINTS:                                                         
REMARK   3                                                                      
REMARK   3  (A) INTRASUBUNIT: 852 SEQUENTIAL (|I-J|=1), 712 MEDIUM              
REMARK   3  RANGE (1 < |I-J| >=5) AND 76 LONG RANGE (|I-J| >5)                  
REMARK   3  INTERRESIDUES AND 740 INTRARESIDUE APPROXIMATE INTERPROTON          
REMARK   3  DISTANCE RESTRAINTS, 136 DISTANCE RESTRAINTS FOR 68                 
REMARK   3  HYDROGEN BONDS, 284 TORSION ANGLE (144 PHI, 104 CHI1, AND           
REMARK   3  36 CHI2) RESTRAINTS, AND 144 THREE-BOND HN-HA COUPLING              
REMARK   3  CONSTANT RESTRAINTS.                                                
REMARK   3                                                                      
REMARK   3  (B) INTERSUBUNIT: 244 A-B/C-D, 876 A-C/B-D, 40 A-D/B-C              
REMARK   3  APPROXIMATE INTERPROTON DISTANCE RESTRAINTS, 40 DISTANCE            
REMARK   3  RESTRAINTS FOR 20 HYDROGEN BONDS INVOLVING THE A-C/B-D              
REMARK   3  SUBUNITS, AND 36 DISTANCE RESTRAINTS FOR 4 WATER MOLECULES.         
REMARK   3  IN ADDITION, THERE ARE A TOTAL OF 38 CALPHA AND 35 CB               
REMARK   3  CHEMICAL SHIFT RESTRAINTS PER SUBUNIT THAT HAVE BEEN                
REMARK   3  INCORPORATED INTO THE REFINEMENT [J. KUSZWESKI, J. QIN,             
REMARK   3  A.M. GRONENBORN AND G.M. CLORE, J. MAGN RESON. SER B 106,           
REMARK   3  92-96 (1995)].                                                      
REMARK   3                                                                      
REMARK   3  THE 77 STRUCTURES PRESENTED IN PDB ENTRIES 1SAE, 1SAG, AND          
REMARK   3  1SAI ARE CALCULATED WITH THE FOLLOWING VALUES FOR THE HARD          
REMARK   3  SPHERE EFFECTIVE VAN DER WAALS RADII USED IN QUARTIC VAN            
REMARK   3  DER WAALS REPULSION TERM.  IN THE SOURCE REFERENCE, THESE           
REMARK   3  STRUCTURES ARE REFERRED TO AS <SAC>.  H(POLAR) = 0.64               
REMARK   3  ANGSTROMS, H (NON-POLAR) = 1.17 ANGSTROMS, N = 1.24                 
REMARK   3  ANGSTROMS, C = 1.44 ANGSTROMS, O = 1.19 ANGSTROMS, AND S =          
REMARK   3  1.52 ANGSTROMS.  THESE VALUES CORRESPOND TO 0.8 TIMES THE           
REMARK   3  VAN DER WAALS RADII EMPLOYED IN THE PARAM19/PARAM20 ENERGY          
REMARK   3  PARAMETERS OF CHARMM.                                               
REMARK   3                                                                      
REMARK   3  THE STRUCTURES ARE CALCULATED USING THE HYBRID METRIC               
REMARK   3  MATRIX DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING              
REMARK   3  METHOD DESCRIBED BY: NILGES, M., CLORE, G.M. &                      
REMARK   3  GRONENBORN, A.M. (1988) FEBS LETT. 229, 317-324.  ALL               
REMARK   3  STRUCTURAL STATISTICS ARE GIVEN IN THE SOURCE REFERENCE.            
REMARK   3                                                                      
REMARK   3  ENTRY 1SAK CONTAINS THE RESTRAINED MINIMIZED AVERAGE                
REMARK   3  STRUCTURE: (SA)R.  THIS IS OBTAINED BY FIRST AVERAGING THE          
REMARK   3  COORDINATES OF THE INDIVIDUAL 77 DYNAMICAL SIMULATED                
REMARK   3  ANNEALING SA STRUCTURES BEST FITTED TO RESIDUES 326 - 354           
REMARK   3  OF ALL FOUR SUBUNITS, AND SUBJECTING THE RESULTING                  
REMARK   3  COORDINATES TO RESTRAINED MINIMIZATION.  THE QUANTITY               
REMARK   3  PRESENTED IN COLUMNS 61 - 66 IN THIS SET OF COORDINATES             
REMARK   3  (THE B-FACTOR COLUMN IN X-RAY STRUCTURES) GIVES THE                 
REMARK   3  AVERAGE RMS DIFFERENCE BETWEEN THE INDIVIDUAL SA STRUCTURES         
REMARK   3  AND THE MEAN STRUCTURE.  THE NUMBERS IN COLUMNS 61 - 66 OF          
REMARK   3  THE INDIVIDUAL STRUCTURES HAVE NO MEANING.  NOTE THAT               
REMARK   3  RESIDUES 319 - 323 AT THE N-TERMINUS AND RESIDUES 357 - 360         
REMARK   3  AT THE C-TERMINUS ARE COMPLETELY DISORDERED.                        
REMARK   4                                                                      
REMARK   4 1SAE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.                                
REMARK 100 THE DEPOSITION ID IS D_1000176282.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : NULL                               
REMARK 210  PH                             : NULL                               
REMARK 210  IONIC STRENGTH                 : NULL                               
REMARK 210  PRESSURE                       : NULL                               
REMARK 210  SAMPLE CONTENTS                : NULL                               
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : NULL                               
REMARK 210  SPECTROMETER FIELD STRENGTH    : NULL                               
REMARK 210  SPECTROMETER MODEL             : NULL                               
REMARK 210  SPECTROMETER MANUFACTURER      : NULL                               
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NULL                               
REMARK 210   METHOD USED                   : NULL                               
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : NULL                               
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 77                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : NULL                               
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL                
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D                            
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 LYS A 321       73.55     50.85                                   
REMARK 500  1 PRO A 322       12.32    -64.94                                   
REMARK 500  1 LEU A 323       36.16    -80.35                                   
REMARK 500  1 ASP A 324     -117.58    -77.80                                   
REMARK 500  1 LYS B 321       73.53     50.87                                   
REMARK 500  1 PRO B 322       12.37    -64.93                                   
REMARK 500  1 LEU B 323       36.18    -80.43                                   
REMARK 500  1 ASP B 324     -117.71    -77.85                                   
REMARK 500  1 LYS C 321       73.61     50.75                                   
REMARK 500  1 PRO C 322       12.28    -64.92                                   
REMARK 500  1 LEU C 323       36.25    -80.44                                   
REMARK 500  1 ASP C 324     -117.61    -77.86                                   
REMARK 500  1 LYS D 321       73.60     50.76                                   
REMARK 500  1 PRO D 322       12.31    -64.90                                   
REMARK 500  1 LEU D 323       36.22    -80.41                                   
REMARK 500  1 ASP D 324     -117.65    -77.89                                   
REMARK 500  2 LYS A 320      111.98     59.20                                   
REMARK 500  2 PRO A 322       41.05    -70.65                                   
REMARK 500  2 ALA A 355      -80.90    -69.65                                   
REMARK 500  2 LYS A 357      -86.97    -86.55                                   
REMARK 500  2 LYS B 320      112.04     59.16                                   
REMARK 500  2 PRO B 322       40.98    -70.63                                   
REMARK 500  2 ALA B 355      -80.90    -69.72                                   
REMARK 500  2 LYS B 357      -87.07    -86.44                                   
REMARK 500  2 LYS C 320      112.02     59.09                                   
REMARK 500  2 PRO C 322       41.01    -70.66                                   
REMARK 500  2 ALA C 355      -80.95    -69.72                                   
REMARK 500  2 LYS C 357      -87.10    -86.51                                   
REMARK 500  2 LYS D 320      112.00     59.26                                   
REMARK 500  2 PRO D 322       41.06    -70.68                                   
REMARK 500  2 ALA D 355      -80.93    -69.70                                   
REMARK 500  2 LYS D 357      -87.04    -86.52                                   
REMARK 500  3 LYS A 320       74.44     55.78                                   
REMARK 500  3 LYS A 321       81.57     53.72                                   
REMARK 500  3 ASP A 324     -138.74    -81.04                                   
REMARK 500  3 LYS B 320       74.44     55.78                                   
REMARK 500  3 LYS B 321       81.51     53.71                                   
REMARK 500  3 ASP B 324     -138.98    -81.11                                   
REMARK 500  3 LYS C 320       74.35     55.83                                   
REMARK 500  3 LYS C 321       81.50     53.88                                   
REMARK 500  3 ASP C 324     -138.77    -81.00                                   
REMARK 500  3 LYS D 320       74.31     55.93                                   
REMARK 500  3 LYS D 321       81.57     53.79                                   
REMARK 500  3 ASP D 324     -138.77    -81.06                                   
REMARK 500  4 LYS A 320       88.60     54.74                                   
REMARK 500  4 LYS A 321       66.81     61.77                                   
REMARK 500  4 ALA A 355      -84.55    -69.59                                   
REMARK 500  4 PRO A 359        3.33    -60.47                                   
REMARK 500  4 LYS B 320       88.63     54.71                                   
REMARK 500  4 LYS B 321       66.79     61.80                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS    1281 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1SAG   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 1SAI   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 1SAK   RELATED DB: PDB                                   
DBREF  1SAE A  319   360  UNP    P04637   P53_HUMAN      319    360             
DBREF  1SAE B  319   360  UNP    P04637   P53_HUMAN      319    360             
DBREF  1SAE C  319   360  UNP    P04637   P53_HUMAN      319    360             
DBREF  1SAE D  319   360  UNP    P04637   P53_HUMAN      319    360             
SEQRES   1 A   42  LYS LYS LYS PRO LEU ASP GLY GLU TYR PHE THR LEU GLN          
SEQRES   2 A   42  ILE ARG GLY ARG GLU ARG PHE GLU MET PHE ARG GLU LEU          
SEQRES   3 A   42  ASN GLU ALA LEU GLU LEU LYS ASP ALA GLN ALA GLY LYS          
SEQRES   4 A   42  GLU PRO GLY                                                  
SEQRES   1 B   42  LYS LYS LYS PRO LEU ASP GLY GLU TYR PHE THR LEU GLN          
SEQRES   2 B   42  ILE ARG GLY ARG GLU ARG PHE GLU MET PHE ARG GLU LEU          
SEQRES   3 B   42  ASN GLU ALA LEU GLU LEU LYS ASP ALA GLN ALA GLY LYS          
SEQRES   4 B   42  GLU PRO GLY                                                  
SEQRES   1 C   42  LYS LYS LYS PRO LEU ASP GLY GLU TYR PHE THR LEU GLN          
SEQRES   2 C   42  ILE ARG GLY ARG GLU ARG PHE GLU MET PHE ARG GLU LEU          
SEQRES   3 C   42  ASN GLU ALA LEU GLU LEU LYS ASP ALA GLN ALA GLY LYS          
SEQRES   4 C   42  GLU PRO GLY                                                  
SEQRES   1 D   42  LYS LYS LYS PRO LEU ASP GLY GLU TYR PHE THR LEU GLN          
SEQRES   2 D   42  ILE ARG GLY ARG GLU ARG PHE GLU MET PHE ARG GLU LEU          
SEQRES   3 D   42  ASN GLU ALA LEU GLU LEU LYS ASP ALA GLN ALA GLY LYS          
SEQRES   4 D   42  GLU PRO GLY                                                  
FORMUL   5  HOH   *4(H2 O)                                                      
HELIX    1   1 ARG A  335  ALA A  355  1                                  21    
HELIX    2   2 ARG B  335  ALA B  355  1                                  21    
HELIX    3   3 ARG C  335  ALA C  355  1                                  21    
HELIX    4   4 ARG D  335  ALA D  355  1                                  21    
SHEET    1   A 2 TYR A 327  ARG A 333  0                                        
SHEET    2   A 2 TYR C 327  ARG C 333 -1  N  ILE C 332   O  PHE A 328           
SHEET    1   B 2 TYR B 327  ARG B 333  0                                        
SHEET    2   B 2 TYR D 327  ARG D 333 -1  N  ILE D 332   O  PHE B 328           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000