PDB Short entry for 1SJR
HEADER    RNA BINDING PROTEIN                     04-MAR-04   1SJR              
TITLE     NMR STRUCTURE OF RRM2 FROM HUMAN POLYPYRIMIDINE TRACT BINDING PROTEIN 
TITLE    2 ISOFORM 1 (PTB1)                                                     
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: POLYPYRIMIDINE TRACT-BINDING PROTEIN 1;                    
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: PTB, HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN I, HNRNP I, 57 
COMPND   5 KDA RNA-BINDING PROTEIN PPTB-1;                                      
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: PTBP1, PTB;                                                    
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: SG13009 (QIAGEN);                          
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PQE9                                      
KEYWDS    EXTENDED BABBAB MOTIF, RNA BINDING PROTEIN                            
EXPDTA    SOLUTION NMR                                                          
NUMMDL    16                                                                    
MDLTYP    MINIMIZED AVERAGE                                                     
AUTHOR    P.J.SIMPSON,T.P.MONIE,A.SZENDROI,N.DAVYDOVA,J.K.TYZACK,M.R.CONTE,     
AUTHOR   2 C.M.READ,P.D.CARY,D.I.SVERGUN,P.V.KONAREV,M.V.PETOUKHOV,S.CURRY,     
AUTHOR   3 S.J.MATTHEWS                                                         
REVDAT   3   02-MAR-22 1SJR    1       REMARK SEQADV                            
REVDAT   2   24-FEB-09 1SJR    1       VERSN                                    
REVDAT   1   14-SEP-04 1SJR    0                                                
JRNL        AUTH   P.J.SIMPSON,T.P.MONIE,A.SZENDROI,N.DAVYDOVA,J.K.TYZACK,      
JRNL        AUTH 2 M.R.CONTE,C.M.READ,P.D.CARY,D.I.SVERGUN,P.V.KONAREV,S.CURRY, 
JRNL        AUTH 3 S.J.MATTHEWS                                                 
JRNL        TITL   STRUCTURE AND RNA INTERACTIONS OF THE N-TERMINAL RRM DOMAINS 
JRNL        TITL 2 OF PTB                                                       
JRNL        REF    STRUCTURE                     V.  12  1631 2004              
JRNL        REFN                   ISSN 0969-2126                               
JRNL        PMID   15341728                                                     
JRNL        DOI    10.1016/J.STR.2004.07.008                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : XWINNMR 3.1, X-PLOR 3.851                            
REMARK   3   AUTHORS     : BRUKER BIOSPIN (XWINNMR), BRUNGER, A.T. (X-PLOR)     
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1SJR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-04.                  
REMARK 100 THE DEPOSITION ID IS D_1000021770.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 303                                
REMARK 210  PH                             : 6.5                                
REMARK 210  IONIC STRENGTH                 : 0.3 M                              
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 0.25 MM PTB1-2, U-15N, 13C, 50     
REMARK 210                                   MM NA PHOSPHATE BUFFER, 100 MM     
REMARK 210                                   NACL, 10 MM DTT, 2 MM NAN3,10%     
REMARK 210                                   D2O                                
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D_15N-SEPARATED_NOESY; 3D_13C     
REMARK 210                                   -SEPARATED_NOESY                   
REMARK 210  SPECTROMETER FIELD STRENGTH    : 500 MHZ; 800 MHZ                   
REMARK 210  SPECTROMETER MODEL             : DRX; INOVA                         
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER; VARIAN                     
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NMRPIPE 1, NMRVIEW 4.1.3, X-PLOR   
REMARK 210                                   3.851                              
REMARK 210   METHOD USED                   : HYBRID DISTANCE                    
REMARK 210                                   GEOMETRY/SIMULATED ANNEALING       
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 50                                 
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 16                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR      
REMARK 210  SPECTROSCOPY.                                                       
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465   MODELS 1-16                                                        
REMARK 465     RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     HIS A     2                                                      
REMARK 465     HIS A     3                                                      
REMARK 465     HIS A     4                                                      
REMARK 465     HIS A     5                                                      
REMARK 465     HIS A     6                                                      
REMARK 465     HIS A     7                                                      
REMARK 465     GLY A     8                                                      
REMARK 465     SER A     9                                                      
REMARK 465     ALA A    10                                                      
REMARK 465     GLN A    11                                                      
REMARK 465     ALA A    12                                                      
REMARK 465     ALA A    13                                                      
REMARK 465     LEU A    14                                                      
REMARK 465     GLN A    15                                                      
REMARK 465     ALA A    16                                                      
REMARK 465     VAL A    17                                                      
REMARK 465     ASN A    18                                                      
REMARK 465     SER A    19                                                      
REMARK 465     VAL A    20                                                      
REMARK 465     GLN A    21                                                      
REMARK 465     SER A    22                                                      
REMARK 465     GLY A    23                                                      
REMARK 465     ASN A    24                                                      
REMARK 465     LEU A    25                                                      
REMARK 465     ALA A    26                                                      
REMARK 465     LEU A    27                                                      
REMARK 465     ALA A    28                                                      
REMARK 465     ALA A    29                                                      
REMARK 465     SER A    30                                                      
REMARK 465     ALA A    31                                                      
REMARK 465     ALA A    32                                                      
REMARK 465     ALA A    33                                                      
REMARK 465     VAL A    34                                                      
REMARK 465     ASP A    35                                                      
REMARK 465     ALA A    36                                                      
REMARK 465     GLY A    37                                                      
REMARK 465     MET A    38                                                      
REMARK 465     ALA A    39                                                      
REMARK 465     SER A   148                                                      
REMARK 465     GLN A   149                                                      
REMARK 465     PRO A   150                                                      
REMARK 465     SER A   151                                                      
REMARK 465     LEU A   152                                                      
REMARK 465     ASP A   153                                                      
REMARK 465     GLN A   154                                                      
REMARK 465     THR A   155                                                      
REMARK 465     MET A   156                                                      
REMARK 465     ALA A   157                                                      
REMARK 465     ALA A   158                                                      
REMARK 465     ALA A   159                                                      
REMARK 465     PHE A   160                                                      
REMARK 465     GLY A   161                                                      
REMARK 465     LEU A   162                                                      
REMARK 465     SER A   163                                                      
REMARK 465     VAL A   164                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    PHE A    67     HH   TYR A    91              1.38            
REMARK 500   H    ASN A   131     O    PRO A   144              1.50            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 ALA A  41       65.10    -68.39                                   
REMARK 500  1 GLN A  43       57.03     36.38                                   
REMARK 500  1 ASN A  53       77.26     70.95                                   
REMARK 500  1 PHE A  55      -75.08   -142.21                                   
REMARK 500  1 ASN A  83       40.87     85.62                                   
REMARK 500  1 TYR A 110      -64.82   -129.39                                   
REMARK 500  1 ASN A 111      -66.20   -147.15                                   
REMARK 500  1 ALA A 112       41.59   -148.24                                   
REMARK 500  1 CYS A 114       33.12     73.40                                   
REMARK 500  1 THR A 115      124.26    -36.20                                   
REMARK 500  1 SER A 121      171.14    -50.96                                   
REMARK 500  1 THR A 124       19.11     55.74                                   
REMARK 500  1 LYS A 129       24.94   -143.48                                   
REMARK 500  1 ASN A 132      -91.21   -146.02                                   
REMARK 500  1 ASP A 133      -41.34   -140.81                                   
REMARK 500  1 ARG A 136      108.58   -165.54                                   
REMARK 500  1 ASP A 142       30.32    -89.02                                   
REMARK 500  2 ALA A  41       91.47   -179.86                                   
REMARK 500  2 GLN A  43       77.10     81.49                                   
REMARK 500  2 ASN A  53       75.05     37.16                                   
REMARK 500  2 PHE A  55      -48.91   -155.06                                   
REMARK 500  2 ASN A  82      -19.03     86.94                                   
REMARK 500  2 ASN A  83       41.00    158.93                                   
REMARK 500  2 ASN A 111      -65.20     66.69                                   
REMARK 500  2 ALA A 112       48.79   -165.14                                   
REMARK 500  2 CYS A 114       33.68     72.60                                   
REMARK 500  2 THR A 115      107.72    -36.24                                   
REMARK 500  2 THR A 124       19.36     55.16                                   
REMARK 500  2 SER A 125      167.66    158.86                                   
REMARK 500  2 ASN A 127      109.40    -59.35                                   
REMARK 500  2 LYS A 129       40.19   -143.25                                   
REMARK 500  2 ASN A 132      -90.97   -170.46                                   
REMARK 500  2 ASP A 133      -40.68   -138.80                                   
REMARK 500  2 TYR A 138       70.98   -110.78                                   
REMARK 500  2 THR A 139      -35.58   -176.97                                   
REMARK 500  3 ALA A  41       44.85   -165.98                                   
REMARK 500  3 ASN A  53       80.50     64.96                                   
REMARK 500  3 PHE A  55      -59.00   -148.50                                   
REMARK 500  3 LYS A  81      -95.16    -72.08                                   
REMARK 500  3 ASN A  82       38.97    -91.64                                   
REMARK 500  3 ASN A  83       44.24     86.61                                   
REMARK 500  3 TYR A 110      -77.68   -112.52                                   
REMARK 500  3 ASN A 111       87.72   -152.13                                   
REMARK 500  3 THR A 115      136.61    -38.96                                   
REMARK 500  3 SER A 121      170.49    -50.75                                   
REMARK 500  3 THR A 124       18.24     56.84                                   
REMARK 500  3 ASN A 127       60.64   -102.79                                   
REMARK 500  3 LYS A 129       15.44   -142.19                                   
REMARK 500  3 ASN A 132      -28.31     86.75                                   
REMARK 500  3 ASP A 142       30.98    -89.79                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     256 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1SJQ   RELATED DB: PDB                                   
REMARK 900 NMR STRUCTURE OF RRM1 FROM HUMAN POLYPYRIMIDINE TRACT BINDING        
REMARK 900 PROTEIN ISOFORM 1 (PTB1)                                             
DBREF  1SJR A   10   164  UNP    P26599   PTBP1_HUMAN    147    301             
SEQADV 1SJR MET A    1  UNP  P26599              INITIATING METHIONINE          
SEQADV 1SJR HIS A    2  UNP  P26599              EXPRESSION TAG                 
SEQADV 1SJR HIS A    3  UNP  P26599              EXPRESSION TAG                 
SEQADV 1SJR HIS A    4  UNP  P26599              EXPRESSION TAG                 
SEQADV 1SJR HIS A    5  UNP  P26599              EXPRESSION TAG                 
SEQADV 1SJR HIS A    6  UNP  P26599              EXPRESSION TAG                 
SEQADV 1SJR HIS A    7  UNP  P26599              EXPRESSION TAG                 
SEQADV 1SJR GLY A    8  UNP  P26599              EXPRESSION TAG                 
SEQADV 1SJR SER A    9  UNP  P26599              EXPRESSION TAG                 
SEQRES   1 A  164  MET HIS HIS HIS HIS HIS HIS GLY SER ALA GLN ALA ALA          
SEQRES   2 A  164  LEU GLN ALA VAL ASN SER VAL GLN SER GLY ASN LEU ALA          
SEQRES   3 A  164  LEU ALA ALA SER ALA ALA ALA VAL ASP ALA GLY MET ALA          
SEQRES   4 A  164  MET ALA GLY GLN SER PRO VAL LEU ARG ILE ILE VAL GLU          
SEQRES   5 A  164  ASN LEU PHE TYR PRO VAL THR LEU ASP VAL LEU HIS GLN          
SEQRES   6 A  164  ILE PHE SER LYS PHE GLY THR VAL LEU LYS ILE ILE THR          
SEQRES   7 A  164  PHE THR LYS ASN ASN GLN PHE GLN ALA LEU LEU GLN TYR          
SEQRES   8 A  164  ALA ASP PRO VAL SER ALA GLN HIS ALA LYS LEU SER LEU          
SEQRES   9 A  164  ASP GLY GLN ASN ILE TYR ASN ALA CYS CYS THR LEU ARG          
SEQRES  10 A  164  ILE ASP PHE SER LYS LEU THR SER LEU ASN VAL LYS TYR          
SEQRES  11 A  164  ASN ASN ASP LYS SER ARG ASP TYR THR ARG PRO ASP LEU          
SEQRES  12 A  164  PRO SER GLY ASP SER GLN PRO SER LEU ASP GLN THR MET          
SEQRES  13 A  164  ALA ALA ALA PHE GLY LEU SER VAL                              
HELIX    1   1 THR A   59  GLY A   71  1                                  13    
HELIX    2   2 ASP A   93  LEU A  104  1                                  12    
SHEET    1   A 5 LEU A 116  PHE A 120  0                                        
SHEET    2   A 5 VAL A  46  VAL A  51 -1  N  ARG A  48   O  ASP A 119           
SHEET    3   A 5 PHE A  85  TYR A  91 -1  O  ALA A  87   N  ILE A  49           
SHEET    4   A 5 VAL A  73  THR A  80 -1  N  ILE A  77   O  LEU A  88           
SHEET    5   A 5 SER A 135  ASP A 137 -1  O  ARG A 136   N  ILE A  76           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000