PDB Short entry for 1SN6 HEADER MEMBRANE PROTEIN 10-MAR-04 1SN6 TITLE NMR SOLUTION STRUCTURE OF HUMAN SAPOSIN C IN SDS MICELLES COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROACTIVATOR POLYPEPTIDE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SAPOSIN C; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PSAP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-30B KEYWDS 3 DISULFIDE BRIDGES, ALL ALPHA-HELICES, ALPHA-HELICES CONNECTED BY KEYWDS 2 TURNS, MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.A.HAWKINS,E.DE ALBA,N.TJANDRA REVDAT 3 02-MAR-22 1SN6 1 REMARK SEQADV REVDAT 2 24-FEB-09 1SN6 1 VERSN REVDAT 1 01-MAR-05 1SN6 0 JRNL AUTH C.A.HAWKINS,E.ALBA,N.TJANDRA JRNL TITL SOLUTION STRUCTURE OF HUMAN SAPOSIN C IN A DETERGENT JRNL TITL 2 ENVIRONMENT. JRNL REF J.MOL.BIOL. V. 346 1381 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 15713488 JRNL DOI 10.1016/J.JMB.2004.12.045 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.DE ALBA,S.WEILER,N.TJANDRA REMARK 1 TITL SOLUTION STRUCTURE OF HUMAN SAPOSIN C: PH-DEPENDENT REMARK 1 TITL 2 INTERACTION WITH PHOSPHOLIPID VESICLES REMARK 1 REF BIOCHEMISTRY V. 42 14729 2003 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 14674747 REMARK 1 DOI 10.1021/BI0301338 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.5, XPLOR-NIH 2.9.3 REMARK 3 AUTHORS : BRUKER (XWINNMR), SCHWIETERS, KUSZEWSKI, TJANDRA, REMARK 3 CLORE (XPLOR-NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON 1854 NOE REMARK 3 -DERIVED DISTANCE RESTRAINTS, 117 DIHEDRAL ANGLE RESTRAINTS, AND REMARK 3 56 DISTANCE RESTRAINTS DERIVED FROM HYDROGEN BOND. REMARK 4 REMARK 4 1SN6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAR-04. REMARK 100 THE DEPOSITION ID IS D_1000021844. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298; 298 REMARK 210 PH : 6.8; 6.4 REMARK 210 IONIC STRENGTH : 25MM SODIUM DODECYL SULFATE U REMARK 210 -2H; 0.01% SODIUM AZIDE; 25MM REMARK 210 SODIUM DODECYL SULFATE U-2H; REMARK 210 0.01% SODIUM AZIDE REMARK 210 PRESSURE : AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM SAPOSIN C U-15N, U-13C; 25MM REMARK 210 SODIUM DODECYL SULFATE U-2H; REMARK 210 0.01% SODIUM AZIDE; 90% H20, 10% REMARK 210 D20; 1MM SAPOSIN C U-15N; 25MM REMARK 210 SODIUM DODECYL SULFATE U-2H; REMARK 210 0.01% SODIUM AZIDE; 90% H20, 10% REMARK 210 D20; 1MM SAPOSIN C U-15N, U-13C; REMARK 210 25MM SODIUM DODECYL SULFATE U-2H; REMARK 210 0.01% SODIUM AZIDE; 100% D20 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; REMARK 210 4D_13C/15N-SEPARATED_NOESY; 4D_ REMARK 210 13C-SEPARATED_NOESY; CBCACONH; REMARK 210 CBCANH; HNCO; 15N-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX; DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.1, PIPP 4.2.8 REMARK 210 METHOD USED : DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED IN THE PRESENCE OF DETERGENT REMARK 210 MICELLES. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H3 SER A 1 H ASP A 2 1.32 REMARK 500 O ALA A 31 H LYS A 34 1.51 REMARK 500 O VAL A 12 HG1 THR A 16 1.57 REMARK 500 O THR A 16 H ASP A 20 1.58 REMARK 500 O VAL A 50 H TYR A 54 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 2 43.32 -157.53 REMARK 500 1 ASN A 21 27.61 -160.60 REMARK 500 1 ILE A 28 -71.94 -82.98 REMARK 500 1 LYS A 34 -67.49 -106.98 REMARK 500 1 PRO A 40 170.44 -51.81 REMARK 500 1 GLU A 64 -57.83 -120.56 REMARK 500 1 CYS A 78 34.95 -80.49 REMARK 500 2 ASP A 2 44.03 -170.79 REMARK 500 2 ASP A 20 -37.92 -38.47 REMARK 500 2 ASN A 21 38.20 -157.14 REMARK 500 2 THR A 24 -171.84 -66.83 REMARK 500 2 ILE A 28 -72.38 -92.72 REMARK 500 2 LYS A 34 -69.34 -107.50 REMARK 500 2 CYS A 36 22.75 -77.00 REMARK 500 2 SER A 57 -72.78 -92.70 REMARK 500 2 ILE A 58 -44.81 -26.39 REMARK 500 2 LEU A 62 3.71 -59.05 REMARK 500 2 GLU A 64 -56.35 -129.63 REMARK 500 2 LEU A 75 1.15 -66.80 REMARK 500 2 CYS A 78 -95.73 -84.32 REMARK 500 2 SER A 79 92.69 -58.64 REMARK 500 3 ASP A 2 42.23 -164.34 REMARK 500 3 VAL A 3 -69.95 -103.86 REMARK 500 3 ILE A 19 -18.97 -42.68 REMARK 500 3 ASN A 21 -5.78 -168.17 REMARK 500 3 ILE A 28 -72.55 -84.65 REMARK 500 3 PRO A 40 141.05 -37.42 REMARK 500 3 SER A 57 -65.75 -91.08 REMARK 500 3 LEU A 62 2.37 -53.63 REMARK 500 3 GLU A 64 -56.87 -131.52 REMARK 500 3 GLU A 65 -17.24 -43.56 REMARK 500 4 ASP A 2 42.33 -72.73 REMARK 500 4 ASN A 21 14.91 -147.22 REMARK 500 4 ILE A 28 -71.81 -83.32 REMARK 500 4 LYS A 34 -65.88 -109.71 REMARK 500 4 SER A 56 -19.07 -48.73 REMARK 500 4 SER A 57 -80.90 -93.00 REMARK 500 4 ILE A 58 -46.58 -28.06 REMARK 500 4 LEU A 62 -5.27 -52.64 REMARK 500 4 GLU A 64 -56.19 -131.65 REMARK 500 4 GLU A 65 -16.82 -43.41 REMARK 500 4 SER A 79 92.90 -61.42 REMARK 500 5 ASP A 2 39.37 -158.24 REMARK 500 5 ASN A 21 23.77 -156.11 REMARK 500 5 ILE A 28 -72.65 -88.86 REMARK 500 5 SER A 56 -18.77 -48.09 REMARK 500 5 SER A 57 -82.33 -92.90 REMARK 500 5 ILE A 58 -45.95 -26.97 REMARK 500 5 LEU A 62 -15.38 -47.10 REMARK 500 5 GLU A 64 -56.70 -130.84 REMARK 500 REMARK 500 THIS ENTRY HAS 221 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1M12 RELATED DB: PDB REMARK 900 NMR SOLUTION STRUCTURE OF HUMAN SAPOSIN C DBREF 1SN6 A 1 80 UNP P07602 SAP_HUMAN 311 390 SEQADV 1SN6 LEU A 81 UNP P07602 CLONING ARTIFACT SEQADV 1SN6 VAL A 82 UNP P07602 CLONING ARTIFACT SEQADV 1SN6 PRO A 83 UNP P07602 CLONING ARTIFACT SEQADV 1SN6 ARG A 84 UNP P07602 CLONING ARTIFACT SEQRES 1 A 84 SER ASP VAL TYR CYS GLU VAL CYS GLU PHE LEU VAL LYS SEQRES 2 A 84 GLU VAL THR LYS LEU ILE ASP ASN ASN LYS THR GLU LYS SEQRES 3 A 84 GLU ILE LEU ASP ALA PHE ASP LYS MET CYS SER LYS LEU SEQRES 4 A 84 PRO LYS SER LEU SER GLU GLU CYS GLN GLU VAL VAL ASP SEQRES 5 A 84 THR TYR GLY SER SER ILE LEU SER ILE LEU LEU GLU GLU SEQRES 6 A 84 VAL SER PRO GLU LEU VAL CYS SER MET LEU HIS LEU CYS SEQRES 7 A 84 SER GLY LEU VAL PRO ARG HELIX 1 1 ASP A 2 ASP A 20 1 19 HELIX 2 2 GLU A 25 LEU A 39 1 15 HELIX 3 3 LYS A 41 TYR A 54 1 14 HELIX 4 4 GLY A 55 LEU A 62 1 8 HELIX 5 5 SER A 67 HIS A 76 1 10 SSBOND 1 CYS A 5 CYS A 78 1555 1555 2.02 SSBOND 2 CYS A 8 CYS A 72 1555 1555 2.02 SSBOND 3 CYS A 36 CYS A 47 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000