PDB Short entry for 1SYM HEADER CALCIUM-BINDING PROTEIN 29-MAY-96 1SYM TITLE 3-D SOLUTION STRUCTURE OF REDUCED APO-S100B FROM RAT, NMR, 20 TITLE 2 STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: S100B; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: S100B(BETABETA), S100BETA, S100(BETABETA); COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: SYMMETRIC DIMER OF APO-S100BETA SUBUNITS, JOINED BY COMPND 7 NONCOVALENT INTERACTION AT THE DIMER INTERFACE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: S100BETA FROM RATTUS NORVEGICU; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HMS174; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET11B; SOURCE 10 EXPRESSION_SYSTEM_GENE: S100BETA FROM RATTUS NORVEGICUS KEYWDS METAL-BINDING, CALCIUM-BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.C.DROHAT,D.J.WEBER REVDAT 3 02-MAR-22 1SYM 1 REMARK REVDAT 2 24-FEB-09 1SYM 1 VERSN REVDAT 1 07-DEC-96 1SYM 0 JRNL AUTH A.C.DROHAT,J.C.AMBURGEY,F.ABILDGAARD,M.R.STARICH, JRNL AUTH 2 D.BALDISSERI,D.J.WEBER JRNL TITL SOLUTION STRUCTURE OF RAT APO-S100B(BETA BETA) AS DETERMINED JRNL TITL 2 BY NMR SPECTROSCOPY. JRNL REF BIOCHEMISTRY V. 35 11577 1996 JRNL REFN ISSN 0006-2960 JRNL PMID 8794737 JRNL DOI 10.1021/BI9612226 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.C.AMBURGEY,F.ABILDGAARD,M.R.STARICH,S.SHAH,D.C.HILT, REMARK 1 AUTH 2 D.J.WEBER REMARK 1 TITL 1H, 13C AND 15N NMR ASSIGNMENTS AND SOLUTION SECONDARY REMARK 1 TITL 2 STRUCTURE OF RAT APO-S100 BETA REMARK 1 REF J.BIOMOL.NMR V. 6 171 1995 REMARK 1 REFN ISSN 0925-2738 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1SYM COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000176569. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 16 -77.94 -95.17 REMARK 500 1 LYS A 24 20.94 -140.23 REMARK 500 1 HIS A 25 17.78 -153.95 REMARK 500 1 LEU A 40 -101.49 -73.68 REMARK 500 1 SER A 41 88.77 39.43 REMARK 500 1 HIS A 42 -59.56 -167.11 REMARK 500 1 GLU A 45 -78.05 -130.34 REMARK 500 1 ILE A 47 88.78 61.03 REMARK 500 1 ASP A 63 -60.34 -94.58 REMARK 500 1 ASP A 65 -7.54 -143.83 REMARK 500 1 ASP A 69 -163.60 -102.02 REMARK 500 1 HIS A 90 71.49 -119.33 REMARK 500 1 GLN B 16 -77.71 -95.27 REMARK 500 1 LYS B 24 20.79 -140.09 REMARK 500 1 HIS B 25 17.68 -153.93 REMARK 500 1 LEU B 40 -101.51 -73.75 REMARK 500 1 SER B 41 88.79 39.36 REMARK 500 1 HIS B 42 -59.66 -167.07 REMARK 500 1 GLU B 45 -78.12 -130.41 REMARK 500 1 ILE B 47 88.80 61.11 REMARK 500 1 ASP B 63 -60.44 -94.53 REMARK 500 1 ASP B 65 -7.53 -143.90 REMARK 500 1 ASP B 69 -163.59 -102.01 REMARK 500 1 HIS B 90 71.44 -119.16 REMARK 500 2 TYR A 17 33.02 -159.61 REMARK 500 2 GLU A 21 -158.10 -125.68 REMARK 500 2 LEU A 27 -158.29 -96.89 REMARK 500 2 SER A 41 97.23 -39.25 REMARK 500 2 HIS A 42 -34.04 -179.59 REMARK 500 2 GLU A 45 -75.18 -125.91 REMARK 500 2 ILE A 47 82.17 66.37 REMARK 500 2 ALA A 83 -71.63 -49.15 REMARK 500 2 CYS A 84 43.39 174.28 REMARK 500 2 GLU A 86 55.11 -95.35 REMARK 500 2 GLU A 89 -70.86 -111.35 REMARK 500 2 HIS A 90 24.55 -154.96 REMARK 500 2 TYR B 17 32.97 -159.57 REMARK 500 2 GLU B 21 -157.99 -125.65 REMARK 500 2 LEU B 27 -158.25 -96.87 REMARK 500 2 SER B 41 97.18 -39.20 REMARK 500 2 HIS B 42 -34.03 -179.58 REMARK 500 2 GLU B 45 -75.11 -125.89 REMARK 500 2 ILE B 47 82.28 66.39 REMARK 500 2 ALA B 83 -71.60 -49.24 REMARK 500 2 CYS B 84 43.38 174.31 REMARK 500 2 GLU B 86 55.22 -95.43 REMARK 500 2 GLU B 89 -70.91 -111.26 REMARK 500 2 HIS B 90 24.53 -154.85 REMARK 500 3 GLU A 21 -163.19 41.30 REMARK 500 3 ASP A 23 -95.59 -57.55 REMARK 500 REMARK 500 THIS ENTRY HAS 552 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 20 0.19 SIDE CHAIN REMARK 500 1 ARG B 20 0.19 SIDE CHAIN REMARK 500 2 ARG A 20 0.22 SIDE CHAIN REMARK 500 2 ARG B 20 0.22 SIDE CHAIN REMARK 500 3 ARG A 20 0.25 SIDE CHAIN REMARK 500 3 ARG B 20 0.25 SIDE CHAIN REMARK 500 4 ARG A 20 0.32 SIDE CHAIN REMARK 500 4 ARG B 20 0.32 SIDE CHAIN REMARK 500 5 ARG A 20 0.24 SIDE CHAIN REMARK 500 5 ARG B 20 0.24 SIDE CHAIN REMARK 500 6 ARG A 20 0.31 SIDE CHAIN REMARK 500 6 ARG B 20 0.31 SIDE CHAIN REMARK 500 7 ARG A 20 0.21 SIDE CHAIN REMARK 500 7 ARG B 20 0.21 SIDE CHAIN REMARK 500 9 ARG A 20 0.17 SIDE CHAIN REMARK 500 9 ARG B 20 0.17 SIDE CHAIN REMARK 500 10 ARG A 20 0.31 SIDE CHAIN REMARK 500 10 ARG B 20 0.31 SIDE CHAIN REMARK 500 11 ARG A 20 0.31 SIDE CHAIN REMARK 500 11 ARG B 20 0.31 SIDE CHAIN REMARK 500 12 ARG A 20 0.23 SIDE CHAIN REMARK 500 12 ARG B 20 0.23 SIDE CHAIN REMARK 500 13 ARG A 20 0.32 SIDE CHAIN REMARK 500 13 ARG B 20 0.32 SIDE CHAIN REMARK 500 14 ARG A 20 0.26 SIDE CHAIN REMARK 500 14 ARG B 20 0.26 SIDE CHAIN REMARK 500 15 ARG A 20 0.20 SIDE CHAIN REMARK 500 15 ARG B 20 0.19 SIDE CHAIN REMARK 500 16 ARG A 20 0.27 SIDE CHAIN REMARK 500 16 ARG B 20 0.27 SIDE CHAIN REMARK 500 17 ARG A 20 0.27 SIDE CHAIN REMARK 500 17 ARG B 20 0.27 SIDE CHAIN REMARK 500 18 ARG A 20 0.27 SIDE CHAIN REMARK 500 18 ARG B 20 0.27 SIDE CHAIN REMARK 500 19 ARG A 20 0.28 SIDE CHAIN REMARK 500 19 ARG B 20 0.28 SIDE CHAIN REMARK 500 20 ARG A 20 0.32 SIDE CHAIN REMARK 500 20 ARG B 20 0.32 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1SYM A 1 91 UNP P04631 S100B_RAT 1 91 DBREF 1SYM B 1 91 UNP P04631 S100B_RAT 1 91 SEQRES 1 A 92 MET SER GLU LEU GLU LYS ALA MET VAL ALA LEU ILE ASP SEQRES 2 A 92 VAL PHE HIS GLN TYR SER GLY ARG GLU GLY ASP LYS HIS SEQRES 3 A 92 LYS LEU LYS LYS SER GLU LEU LYS GLU LEU ILE ASN ASN SEQRES 4 A 92 GLU LEU SER HIS PHE LEU GLU GLU ILE LYS GLU GLN GLU SEQRES 5 A 92 VAL VAL ASP LYS VAL MET GLU THR LEU ASP GLU ASP GLY SEQRES 6 A 92 ASP GLY GLU CYS ASP PHE GLN GLU PHE MET ALA PHE VAL SEQRES 7 A 92 SER MET VAL THR THR ALA CYS HIS GLU PHE PHE GLU HIS SEQRES 8 A 92 GLU SEQRES 1 B 92 MET SER GLU LEU GLU LYS ALA MET VAL ALA LEU ILE ASP SEQRES 2 B 92 VAL PHE HIS GLN TYR SER GLY ARG GLU GLY ASP LYS HIS SEQRES 3 B 92 LYS LEU LYS LYS SER GLU LEU LYS GLU LEU ILE ASN ASN SEQRES 4 B 92 GLU LEU SER HIS PHE LEU GLU GLU ILE LYS GLU GLN GLU SEQRES 5 B 92 VAL VAL ASP LYS VAL MET GLU THR LEU ASP GLU ASP GLY SEQRES 6 B 92 ASP GLY GLU CYS ASP PHE GLN GLU PHE MET ALA PHE VAL SEQRES 7 B 92 SER MET VAL THR THR ALA CYS HIS GLU PHE PHE GLU HIS SEQRES 8 B 92 GLU HELIX 1 1 GLU A 2 TYR A 17 1 16 HELIX 2 2 LYS A 29 ASN A 38 1 10 HELIX 3 3 GLN A 50 ASP A 63 1 14 HELIX 4 4 PHE A 70 THR A 82 1 13 HELIX 5 5 GLU B 2 TYR B 17 1 16 HELIX 6 6 LYS B 29 ASN B 38 1 10 HELIX 7 7 GLN B 50 ASP B 63 1 14 HELIX 8 8 PHE B 70 THR B 82 1 13 SHEET 1 S1 2 LYS A 26 LYS A 28 0 SHEET 2 S1 2 GLU A 67 ASP A 69 -1 N CYS A 68 O LEU A 27 SHEET 1 S2 2 LYS B 26 LYS B 28 0 SHEET 2 S2 2 GLU B 67 ASP B 69 -1 N CYS B 68 O LEU B 27 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000