PDB Short entry for 1TAZ HEADER HYDROLASE 19-MAY-04 1TAZ TITLE CATALYTIC DOMAIN OF HUMAN PHOSPHODIESTERASE 1B COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALCIUM/CALMODULIN-DEPENDENT 3',5'-CYCLIC NUCLEOTIDE COMPND 3 PHOSPHODIESTERASE 1B; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: CATALYTIC DOMAIN; COMPND 6 SYNONYM: CAM-PDE 1B, 63 KDA CAM-PDE; COMPND 7 EC: 3.1.4.17; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PDE1B, PDE1B1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)CODON PLUS(RIL); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS PDE1B, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.Y.J.ZHANG,G.L.CARD,Y.SUZUKI,D.R.ARTIS,D.FONG,S.GILLETTE,D.HSIEH, AUTHOR 2 J.NEIMAN,B.L.WEST,C.ZHANG,M.V.MILBURN,S.-H.KIM,J.SCHLESSINGER, AUTHOR 3 G.BOLLAG REVDAT 4 13-JUL-11 1TAZ 1 VERSN REVDAT 3 23-JUN-09 1TAZ 1 REMARK REVDAT 2 24-FEB-09 1TAZ 1 VERSN REVDAT 1 03-AUG-04 1TAZ 0 JRNL AUTH K.Y.J.ZHANG,G.L.CARD,Y.SUZUKI,D.R.ARTIS,D.FONG,S.GILLETTE, JRNL AUTH 2 D.HSIEH,J.NEIMAN,B.L.WEST,C.ZHANG,M.V.MILBURN,S.-H.KIM, JRNL AUTH 3 J.SCHLESSINGER,G.BOLLAG JRNL TITL A GLUTAMINE SWITCH MECHANISM FOR NUCLEOTIDE SELECTIVITY BY JRNL TITL 2 PHOSPHODIESTERASES JRNL REF MOL.CELL V. 15 279 2004 JRNL REFN ISSN 1097-2765 JRNL PMID 15260978 JRNL DOI 10.1016/J.MOLCEL.2004.07.005 REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.25 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 48382 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2602 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.77 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3534 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2760 REMARK 3 BIN FREE R VALUE SET COUNT : 200 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2601 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 207 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.99000 REMARK 3 B22 (A**2) : 0.99000 REMARK 3 B33 (A**2) : -1.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.092 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.085 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.775 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2759 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2490 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3750 ; 1.084 ; 1.928 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5797 ; 0.858 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 338 ; 4.563 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 428 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3069 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 581 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 667 ; 0.205 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2801 ; 0.225 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1526 ; 0.094 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 148 ; 0.129 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 6 ; 0.085 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 49 ; 0.248 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 19 ; 0.096 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1667 ; 0.557 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2722 ; 1.132 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1092 ; 1.732 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1028 ; 2.826 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 146 A 1209 REMARK 3 ORIGIN FOR THE GROUP (A): 25.3298 9.4021 50.1532 REMARK 3 T TENSOR REMARK 3 T11: 0.0243 T22: 0.0339 REMARK 3 T33: 0.0498 T12: -0.0018 REMARK 3 T13: 0.0087 T23: -0.0404 REMARK 3 L TENSOR REMARK 3 L11: 0.4861 L22: 1.0593 REMARK 3 L33: 1.7450 L12: -0.1857 REMARK 3 L13: -0.3006 L23: 0.1283 REMARK 3 S TENSOR REMARK 3 S11: 0.0065 S12: 0.0672 S13: -0.0053 REMARK 3 S21: -0.0933 S22: 0.0225 S23: -0.0899 REMARK 3 S31: -0.0556 S32: 0.0836 S33: -0.0290 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1TAZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAY-04. REMARK 100 THE RCSB ID CODE IS RCSB022514. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-03 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : BLU-ICE REMARK 200 DATA SCALING SOFTWARE : ELVES REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48382 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 72.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.45900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.510 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50% MPD, 100 MM MES, PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.07550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.61600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.61600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 100.61325 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.61600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.61600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.53775 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.61600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.61600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 100.61325 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.61600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.61600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.53775 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 67.07550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS ONE MONOMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 142 REMARK 465 SER A 143 REMARK 465 HIS A 144 REMARK 465 MET A 145 REMARK 465 LEU A 353 REMARK 465 GLU A 354 REMARK 465 PHE A 406 REMARK 465 SER A 407 REMARK 465 PRO A 408 REMARK 465 LEU A 409 REMARK 465 CYS A 410 REMARK 465 ASP A 411 REMARK 465 PRO A 446 REMARK 465 LEU A 447 REMARK 465 ALA A 448 REMARK 465 ASP A 449 REMARK 465 GLU A 450 REMARK 465 ASP A 451 REMARK 465 SER A 452 REMARK 465 LYS A 453 REMARK 465 SER A 454 REMARK 465 LYS A 455 REMARK 465 ASN A 456 REMARK 465 GLN A 457 REMARK 465 PRO A 458 REMARK 465 SER A 459 REMARK 465 PHE A 460 REMARK 465 GLN A 461 REMARK 465 TRP A 462 REMARK 465 ARG A 463 REMARK 465 GLN A 464 REMARK 465 PRO A 465 REMARK 465 SER A 466 REMARK 465 LEU A 467 REMARK 465 ASP A 468 REMARK 465 VAL A 469 REMARK 465 GLU A 470 REMARK 465 VAL A 471 REMARK 465 GLY A 472 REMARK 465 GLY A 503 REMARK 465 ILE A 504 REMARK 465 THR A 505 REMARK 465 ASN A 506 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 177 30.63 74.47 REMARK 500 CME A 237 -64.50 -21.50 REMARK 500 SER A 290 61.00 33.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 CME A 237 23.0 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1066 DISTANCE = 5.16 ANGSTROMS REMARK 525 HOH A1182 DISTANCE = 6.01 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 264 OD2 REMARK 620 2 HOH A1007 O 91.3 REMARK 620 3 HOH A1008 O 97.7 79.3 REMARK 620 4 HIS A 227 NE2 89.6 166.3 87.1 REMARK 620 5 HIS A 263 NE2 88.6 97.7 173.1 96.0 REMARK 620 6 ASP A 370 OD1 176.1 91.9 85.1 87.8 88.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1004 O REMARK 620 2 HOH A1006 O 174.7 REMARK 620 3 HOH A1007 O 96.3 85.4 REMARK 620 4 HOH A1003 O 90.5 87.6 172.7 REMARK 620 5 HOH A1005 O 88.9 86.0 90.9 86.4 REMARK 620 6 ASP A 264 OD1 85.1 99.8 94.2 89.2 172.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1T9S RELATED DB: PDB REMARK 900 RELATED ID: 1T9R RELATED DB: PDB REMARK 900 RELATED ID: 1TB5 RELATED DB: PDB REMARK 900 RELATED ID: 1TB7 RELATED DB: PDB REMARK 900 RELATED ID: 1TBB RELATED DB: PDB REMARK 900 RELATED ID: 1TBF RELATED DB: PDB DBREF 1TAZ A 146 506 UNP Q01064 PDE1B_HUMAN 146 506 SEQADV 1TAZ GLY A 142 UNP Q01064 EXPRESSION TAG SEQADV 1TAZ SER A 143 UNP Q01064 EXPRESSION TAG SEQADV 1TAZ HIS A 144 UNP Q01064 EXPRESSION TAG SEQADV 1TAZ MET A 145 UNP Q01064 EXPRESSION TAG SEQRES 1 A 365 GLY SER HIS MET VAL GLY PRO THR TYR SER THR ALA VAL SEQRES 2 A 365 LEU ASN CYS LEU LYS ASN LEU ASP LEU TRP CYS PHE ASP SEQRES 3 A 365 VAL PHE SER LEU ASN GLN ALA ALA ASP ASP HIS ALA LEU SEQRES 4 A 365 ARG THR ILE VAL PHE GLU LEU LEU THR ARG HIS ASN LEU SEQRES 5 A 365 ILE SER ARG PHE LYS ILE PRO THR VAL PHE LEU MET SER SEQRES 6 A 365 PHE LEU ASP ALA LEU GLU THR GLY TYR GLY LYS TYR LYS SEQRES 7 A 365 ASN PRO TYR HIS ASN GLN ILE HIS ALA ALA ASP VAL THR SEQRES 8 A 365 GLN THR VAL HIS CME PHE LEU LEU ARG THR GLY MET VAL SEQRES 9 A 365 HIS CYS LEU SER GLU ILE GLU LEU LEU ALA ILE ILE PHE SEQRES 10 A 365 ALA ALA ALA ILE HIS ASP TYR GLU HIS THR GLY THR THR SEQRES 11 A 365 ASN SER PHE HIS ILE GLN THR LYS SER GLU CYS ALA ILE SEQRES 12 A 365 VAL TYR ASN ASP ARG SER VAL LEU GLU ASN HIS HIS ILE SEQRES 13 A 365 SER SER VAL PHE ARG LEU MET GLN ASP ASP GLU MET ASN SEQRES 14 A 365 ILE PHE ILE ASN LEU THR LYS ASP GLU PHE VAL GLU LEU SEQRES 15 A 365 ARG ALA LEU VAL ILE GLU MET VAL LEU ALA THR ASP MET SEQRES 16 A 365 SER CYS HIS PHE GLN GLN VAL LYS THR MET LYS THR ALA SEQRES 17 A 365 LEU GLN GLN LEU GLU ARG ILE ASP LYS PRO LYS ALA LEU SEQRES 18 A 365 SER LEU LEU LEU HIS ALA ALA ASP ILE SER HIS PRO THR SEQRES 19 A 365 LYS GLN TRP LEU VAL HIS SER ARG TRP THR LYS ALA LEU SEQRES 20 A 365 MET GLU GLU PHE PHE ARG GLN GLY ASP LYS GLU ALA GLU SEQRES 21 A 365 LEU GLY LEU PRO PHE SER PRO LEU CYS ASP ARG THR SER SEQRES 22 A 365 THR LEU VAL ALA GLN SER GLN ILE GLY PHE ILE ASP PHE SEQRES 23 A 365 ILE VAL GLU PRO THR PHE SER VAL LEU THR ASP VAL ALA SEQRES 24 A 365 GLU LYS SER VAL GLN PRO LEU ALA ASP GLU ASP SER LYS SEQRES 25 A 365 SER LYS ASN GLN PRO SER PHE GLN TRP ARG GLN PRO SER SEQRES 26 A 365 LEU ASP VAL GLU VAL GLY ASP PRO ASN PRO ASP VAL VAL SEQRES 27 A 365 SER PHE ARG SER THR TRP VAL LYS ARG ILE GLN GLU ASN SEQRES 28 A 365 LYS GLN LYS TRP LYS GLU ARG ALA ALA SER GLY ILE THR SEQRES 29 A 365 ASN MODRES 1TAZ CME A 237 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE HET CME A 237 10 HET ZN A1001 1 HET MG A1002 1 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION FORMUL 1 CME C5 H11 N O3 S2 FORMUL 2 ZN ZN 2+ FORMUL 3 MG MG 2+ FORMUL 4 HOH *207(H2 O) HELIX 1 1 SER A 151 LYS A 159 1 9 HELIX 2 2 ASP A 167 ALA A 175 1 9 HELIX 3 3 HIS A 178 HIS A 191 1 14 HELIX 4 4 ASN A 192 PHE A 197 1 6 HELIX 5 5 PRO A 200 GLY A 216 1 17 HELIX 6 6 ASN A 224 GLY A 243 1 20 HELIX 7 7 MET A 244 LEU A 248 5 5 HELIX 8 8 SER A 249 HIS A 263 1 15 HELIX 9 9 THR A 271 LYS A 279 1 9 HELIX 10 10 SER A 280 ASN A 287 1 8 HELIX 11 11 SER A 290 MET A 304 1 15 HELIX 12 12 GLN A 305 ASN A 310 5 6 HELIX 13 13 THR A 316 ALA A 333 1 18 HELIX 14 14 THR A 334 SER A 337 5 4 HELIX 15 15 CYS A 338 GLN A 352 1 15 HELIX 16 16 ASP A 357 ILE A 371 1 15 HELIX 17 17 SER A 372 LYS A 376 5 5 HELIX 18 18 GLN A 377 GLY A 403 1 27 HELIX 19 19 THR A 413 ILE A 428 1 16 HELIX 20 20 ILE A 428 GLN A 445 1 18 HELIX 21 21 ASN A 475 SER A 502 1 28 LINK C HIS A 236 N CME A 237 1555 1555 1.32 LINK C CME A 237 N APHE A 238 1555 1555 1.35 LINK C CME A 237 N BPHE A 238 1555 1555 1.33 LINK ZN ZN A1001 OD2 ASP A 264 1555 1555 2.13 LINK ZN ZN A1001 O HOH A1007 1555 1555 2.14 LINK ZN ZN A1001 O HOH A1008 1555 1555 2.40 LINK ZN ZN A1001 NE2 HIS A 227 1555 1555 2.20 LINK ZN ZN A1001 NE2 HIS A 263 1555 1555 2.19 LINK ZN ZN A1001 OD1 ASP A 370 1555 1555 2.12 LINK MG MG A1002 O HOH A1004 1555 1555 2.07 LINK MG MG A1002 O HOH A1006 1555 1555 2.16 LINK MG MG A1002 O HOH A1007 1555 1555 2.09 LINK MG MG A1002 O HOH A1003 1555 1555 2.12 LINK MG MG A1002 O HOH A1005 1555 1555 2.15 LINK MG MG A1002 OD1 ASP A 264 1555 1555 2.07 SITE 1 AC1 6 HIS A 227 HIS A 263 ASP A 264 ASP A 370 SITE 2 AC1 6 HOH A1007 HOH A1008 SITE 1 AC2 6 ASP A 264 HOH A1003 HOH A1004 HOH A1005 SITE 2 AC2 6 HOH A1006 HOH A1007 CRYST1 87.232 87.232 134.151 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011464 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011464 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007454 0.00000