PDB Short entry for 1TBZ
HEADER    HYDROLASE/HYDROLASE INHIBITOR           05-FEB-98   1TBZ              
TITLE     HUMAN THROMBIN WITH ACTIVE SITE N-METHYL-D PHENYLALANYL-N-[5-         
TITLE    2 (AMINOIMINOMETHYL)AMINO]-1-{{BENZOTHIAZOLYL)CARBONYL] BUTYL]-L-      
TITLE    3 PROLINAMIDE TRIFLUROACETATE AND EXOSITE-HIRUGEN                      
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: ALPHA-THROMBIN;                                            
COMPND   3 CHAIN: L;                                                            
COMPND   4 EC: 3.4.21.5;                                                        
COMPND   5 MOL_ID: 2;                                                           
COMPND   6 MOLECULE: ALPHA-THROMBIN;                                            
COMPND   7 CHAIN: H;                                                            
COMPND   8 EC: 3.4.21.5;                                                        
COMPND   9 MOL_ID: 3;                                                           
COMPND  10 MOLECULE: HIRUGEN;                                                   
COMPND  11 CHAIN: I                                                             
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 TISSUE: PLASMA;                                                      
SOURCE   6 MOL_ID: 2;                                                           
SOURCE   7 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   8 ORGANISM_COMMON: HUMAN;                                              
SOURCE   9 ORGANISM_TAXID: 9606;                                                
SOURCE  10 TISSUE: PLASMA;                                                      
SOURCE  11 MOL_ID: 3;                                                           
SOURCE  12 ORGANISM_SCIENTIFIC: HIRUDO MEDICINALIS;                             
SOURCE  13 ORGANISM_COMMON: MEDICINAL LEECH;                                    
SOURCE  14 ORGANISM_TAXID: 6421                                                 
KEYWDS    COMPLEX (SERINE PROTEASE-INHIBITOR), HYDROLASE-HYDROLASE INHIBITOR    
KEYWDS   2 COMPLEX                                                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    J.H.MATTHEWS,R.KRISHNAN,M.J.COSTANZO,B.E.MARYANOFF,A.TULINSKY         
REVDAT   4   09-AUG-23 1TBZ    1       REMARK LINK                              
REVDAT   3   13-JUL-11 1TBZ    1       VERSN                                    
REVDAT   2   24-FEB-09 1TBZ    1       VERSN                                    
REVDAT   1   27-MAY-98 1TBZ    0                                                
JRNL        AUTH   J.H.MATTHEWS,R.KRISHNAN,M.J.COSTANZO,B.E.MARYANOFF,          
JRNL        AUTH 2 A.TULINSKY                                                   
JRNL        TITL   CRYSTAL STRUCTURES OF THROMBIN WITH THIAZOLE-CONTAINING      
JRNL        TITL 2 INHIBITORS: PROBES OF THE S1' BINDING SITE.                  
JRNL        REF    BIOPHYS.J.                    V.  71  2830 1996              
JRNL        REFN                   ISSN 0006-3495                               
JRNL        PMID   8913620                                                      
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   J.VIJAYALAKSHMI,K.P.PADMANABHAN,K.G.MANN,A.TULINSKY          
REMARK   1  TITL   THE ISOMORPHOUS STRUCTURES OF PRETHROMBIN2, HIRUGEN-, AND    
REMARK   1  TITL 2 PPACK-THROMBIN: CHANGES ACCOMPANYING ACTIVATION AND EXOSITE  
REMARK   1  TITL 3 BINDING TO THROMBIN                                          
REMARK   1  REF    PROTEIN SCI.                  V.   3  2254 1994              
REMARK   1  REFN                   ISSN 0961-8368                               
REMARK   1 REFERENCE 2                                                          
REMARK   1  AUTH   A.TULINSKY,X.QIU                                             
REMARK   1  TITL   ACTIVE SITE AND EXOSITE BINDING OF ALPHA-THROMBIN            
REMARK   1  REF    BLOOD COAGULATION             V.   4   305 1993              
REMARK   1  REF  2 FIBRINOLYSIS                                                 
REMARK   1  REFN                   ISSN 0957-5235                               
REMARK   1 REFERENCE 3                                                          
REMARK   1  AUTH   X.QIU,K.P.PADMANABHAN,V.E.CARPEROS,A.TULINSKY,T.KLINE,       
REMARK   1  AUTH 2 J.M.MARAGANORE,J.W.FENTON II                                 
REMARK   1  TITL   STRUCTURE OF THE HIRULOG 3-THROMBIN COMPLEX AND NATURE OF    
REMARK   1  TITL 2 THE S' SUBSITES OF SUBSTRATES AND INHIBITORS                 
REMARK   1  REF    BIOCHEMISTRY                  V.  31 11689 1992              
REMARK   1  REFN                   ISSN 0006-2960                               
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.30 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : X-PLOR                                               
REMARK   3   AUTHORS     : BRUNGER                                              
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 7.00                           
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 2.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 75.0                           
REMARK   3   NUMBER OF REFLECTIONS             : 13574                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : NULL                            
REMARK   3   FREE R VALUE TEST SET SELECTION  : NULL                            
REMARK   3   R VALUE            (WORKING SET) : 0.158                           
REMARK   3   FREE R VALUE                     : NULL                            
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : NULL                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : NULL                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : NULL                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : NULL                         
REMARK   3   BIN FREE R VALUE                    : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : NULL                         
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2322                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 40                                      
REMARK   3   SOLVENT ATOMS            : 123                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 28.00                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : NULL                            
REMARK   3   ESD FROM SIGMAA              (A) : NULL                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : NULL                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : NULL                            
REMARK   3   BOND ANGLES            (DEGREES) : NULL                            
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : NULL                            
REMARK   3   IMPROPER ANGLES        (DEGREES) : NULL                            
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : NULL                                      
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : 1.100 ; 1.000                
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : 1.900 ; 1.500                
REMARK   3   SIDE-CHAIN BOND              (A**2) : 2.600 ; 2.000                
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : 3.800 ; 2.500                
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1TBZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.                                
REMARK 100 THE DEPOSITION ID IS D_1000176605.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : APR-93                             
REMARK 200  TEMPERATURE           (KELVIN) : 298                                
REMARK 200  PH                             : 7.3                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU RUH2R                       
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.5418                             
REMARK 200  MONOCHROMATOR                  : GRAPHITE(002)                      
REMARK 200  OPTICS                         : COLLIMATOR                         
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : AREA DETECTOR                      
REMARK 200  DETECTOR MANUFACTURER          : SIEMENS                            
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XENGEN                             
REMARK 200  DATA SCALING SOFTWARE          : XENGEN                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 15300                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.300                              
REMARK 200  RESOLUTION RANGE LOW       (A) : NULL                               
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 2.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 75.0                               
REMARK 200  DATA REDUNDANCY                : 2.500                              
REMARK 200  R MERGE                    (I) : 0.05400                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.40                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 50.0                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: NULL                                           
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: X-PLOR                                                
REMARK 200 STARTING MODEL: PDB ENTRY 1FPC                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 51.00                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M PHOSPHATE BUFFER AT PH 7.3, 27      
REMARK 280  -28% PEG 8000. HANGING DROPS AND MACROSEEDING ., VAPOR DIFFUSION    
REMARK 280  - HANGING DROP - MACROSEEDING                                       
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       35.39500            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       36.26500            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       35.39500            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       36.26500            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 3470 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 12290 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, I                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 400                                                                      
REMARK 400 COMPOUND                                                             
REMARK 400 THROMBIN IS CLEAVED BETWEEN RESIDUES 15 AND 16. CHAIN IDENTIFIER *L* 
REMARK 400 IS USED FOR RESIDUES 1H - 15 AND CHAIN IDENTIFIER *H* IS USED FOR    
REMARK 400 RESIDUES 16 - 247. CHAIN IDENTIFIER *I* IS USED FOR HIRUGEN. THE     
REMARK 400 INHIBITOR 00Q IS COVALENTLY CONNECTED TO SER 195 OF THE ENZYME TO    
REMARK 400 FORM A HEMIKETAL.                                                    
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     THR L    -7                                                      
REMARK 465     PHE L    -6                                                      
REMARK 465     GLY L    -5                                                      
REMARK 465     SER L    -4                                                      
REMARK 465     GLY L    -3                                                      
REMARK 465     GLU L    -2                                                      
REMARK 465     ALA L    -1                                                      
REMARK 465     ASP L     0                                                      
REMARK 465     ASP L    15                                                      
REMARK 465     GLY L    16                                                      
REMARK 465     ARG L    17                                                      
REMARK 465     THR H   146A                                                     
REMARK 465     TRP H   146B                                                     
REMARK 465     THR H   146C                                                     
REMARK 465     ALA H   146D                                                     
REMARK 465     ASN H   146E                                                     
REMARK 465     VAL H   146F                                                     
REMARK 465     GLY H   146G                                                     
REMARK 465     LYS H   146H                                                     
REMARK 465     ASN I    53                                                      
REMARK 465     GLY I    54                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     LYS L  14A   CG   CD   CE   NZ                                   
REMARK 470     GLU I  61    CB   CG   CD   OE1  OE2                             
REMARK 470     GLU I  62    CG   CD   OE1  OE2                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   NH1  ARG H    50     O    LEU H   108              2.17            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   NH1  ARG H    75     OE1  GLU I    57     2555     1.76            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ARG L   4   NE  -  CZ  -  NH1 ANGL. DEV. =   7.8 DEGREES          
REMARK 500    GLU L  13   CB  -  CA  -  C   ANGL. DEV. = -12.6 DEGREES          
REMARK 500    ASP H  21   CB  -  CG  -  OD1 ANGL. DEV. =   6.8 DEGREES          
REMARK 500    ASP H  21   CB  -  CG  -  OD2 ANGL. DEV. =  -5.6 DEGREES          
REMARK 500    SER H  27   N   -  CA  -  CB  ANGL. DEV. = -11.2 DEGREES          
REMARK 500    ARG H  35   NE  -  CZ  -  NH2 ANGL. DEV. =  -5.8 DEGREES          
REMARK 500    ASP H  49   CB  -  CG  -  OD1 ANGL. DEV. =  -5.7 DEGREES          
REMARK 500    TYR H  60A  CB  -  CG  -  CD2 ANGL. DEV. =   4.5 DEGREES          
REMARK 500    TYR H  60A  CB  -  CG  -  CD1 ANGL. DEV. =  -6.9 DEGREES          
REMARK 500    ARG H  67   CD  -  NE  -  CZ  ANGL. DEV. =  10.0 DEGREES          
REMARK 500    ARG H  67   NE  -  CZ  -  NH1 ANGL. DEV. =   4.1 DEGREES          
REMARK 500    ARG H  73   NE  -  CZ  -  NH1 ANGL. DEV. =   3.7 DEGREES          
REMARK 500    ARG H  73   NE  -  CZ  -  NH2 ANGL. DEV. =  -4.3 DEGREES          
REMARK 500    THR H  74   CA  -  CB  -  CG2 ANGL. DEV. =   8.8 DEGREES          
REMARK 500    ARG H  75   NE  -  CZ  -  NH1 ANGL. DEV. =  -4.1 DEGREES          
REMARK 500    ARG H  75   NE  -  CZ  -  NH2 ANGL. DEV. =   3.2 DEGREES          
REMARK 500    TYR H  76   CB  -  CG  -  CD1 ANGL. DEV. =  -5.5 DEGREES          
REMARK 500    GLU H  77   CB  -  CG  -  CD  ANGL. DEV. =  17.6 DEGREES          
REMARK 500    ARG H  77A  CD  -  NE  -  CZ  ANGL. DEV. = -11.1 DEGREES          
REMARK 500    ARG H  77A  NE  -  CZ  -  NH1 ANGL. DEV. =  -5.8 DEGREES          
REMARK 500    ARG H  77A  NE  -  CZ  -  NH2 ANGL. DEV. =  11.2 DEGREES          
REMARK 500    ARG H  77A  CA  -  C   -  N   ANGL. DEV. =  17.3 DEGREES          
REMARK 500    ASN H  78   C   -  N   -  CA  ANGL. DEV. = -15.9 DEGREES          
REMARK 500    GLU H  80   CG  -  CD  -  OE1 ANGL. DEV. = -12.8 DEGREES          
REMARK 500    TYR H  94   CB  -  CG  -  CD2 ANGL. DEV. =  -4.6 DEGREES          
REMARK 500    TYR H  94   CB  -  CG  -  CD1 ANGL. DEV. =   4.9 DEGREES          
REMARK 500    ARG H  97   NH1 -  CZ  -  NH2 ANGL. DEV. =   7.0 DEGREES          
REMARK 500    ARG H  97   NE  -  CZ  -  NH2 ANGL. DEV. =  -7.1 DEGREES          
REMARK 500    GLU H  97A  CA  -  CB  -  CG  ANGL. DEV. =  16.0 DEGREES          
REMARK 500    ARG H 101   NE  -  CZ  -  NH1 ANGL. DEV. =   3.8 DEGREES          
REMARK 500    ARG H 101   NE  -  CZ  -  NH2 ANGL. DEV. =  -7.5 DEGREES          
REMARK 500    ASP H 102   CB  -  CG  -  OD2 ANGL. DEV. =  -6.1 DEGREES          
REMARK 500    ASP H 116   CB  -  CG  -  OD1 ANGL. DEV. =   6.8 DEGREES          
REMARK 500    TYR H 117   CB  -  CG  -  CD2 ANGL. DEV. =  -4.0 DEGREES          
REMARK 500    ARG H 126   CD  -  NE  -  CZ  ANGL. DEV. =  -9.0 DEGREES          
REMARK 500    VAL H 154   N   -  CA  -  CB  ANGL. DEV. = -13.6 DEGREES          
REMARK 500    VAL H 154   CA  -  CB  -  CG1 ANGL. DEV. =   9.1 DEGREES          
REMARK 500    ARG H 173   NE  -  CZ  -  NH1 ANGL. DEV. =   4.4 DEGREES          
REMARK 500    ILE H 176   CA  -  CB  -  CG2 ANGL. DEV. =  13.6 DEGREES          
REMARK 500    TYR H 184A  CB  -  CG  -  CD1 ANGL. DEV. =  -4.9 DEGREES          
REMARK 500    LYS H 186D  N   -  CA  -  CB  ANGL. DEV. =  10.9 DEGREES          
REMARK 500    ASP H 189   CB  -  CG  -  OD1 ANGL. DEV. =   5.5 DEGREES          
REMARK 500    GLU H 192   OE1 -  CD  -  OE2 ANGL. DEV. = -12.2 DEGREES          
REMARK 500    GLU H 192   CG  -  CD  -  OE1 ANGL. DEV. =  12.5 DEGREES          
REMARK 500    ARG H 206   CD  -  NE  -  CZ  ANGL. DEV. =   8.5 DEGREES          
REMARK 500    ARG H 206   NE  -  CZ  -  NH1 ANGL. DEV. =   3.7 DEGREES          
REMARK 500    ARG H 206   NE  -  CZ  -  NH2 ANGL. DEV. =  -4.9 DEGREES          
REMARK 500    ARG H 221A  NE  -  CZ  -  NH2 ANGL. DEV. =   5.2 DEGREES          
REMARK 500    ASP H 243   CB  -  CG  -  OD1 ANGL. DEV. =   6.3 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    PHE L   7      -83.64   -130.72                                   
REMARK 500    TYR H  60A      77.14   -153.61                                   
REMARK 500    ASN H  60G      74.25   -155.48                                   
REMARK 500    HIS H  71      -52.55   -131.01                                   
REMARK 500    ILE H  79      -60.06   -100.60                                   
REMARK 500    GLU H  97A     -64.64   -128.64                                   
REMARK 500    LEU H 130       71.82    -67.71                                   
REMARK 500    GLU H 186B     -32.19    -24.77                                   
REMARK 500    SER H 195      139.45    -37.89                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500    ARG L  14D        0.11    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA H   1  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ARG H 221A  O                                                      
REMARK 620 2 LYS H 224   O   114.1                                              
REMARK 620 3 HOH H 731   O    89.0 130.1                                        
REMARK 620 N                    1     2                                         
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA H   2  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 LYS H 169   O                                                      
REMARK 620 2 THR H 172   O    80.0                                              
REMARK 620 3 PHE H 204A  O    92.3  85.2                                        
REMARK 620 4 HOH H 627   O    64.3  79.0 153.6                                  
REMARK 620 N                    1     2     3                                   
REMARK 630                                                                      
REMARK 630 MOLECULE TYPE: PEPTIDE-LIKE THROMBIN INHIBITOR                       
REMARK 630 MOLECULE NAME: D-PHENYLALANYL-N-{(1S)-1-[(S)-1,3-BENZOTHIAZOL-2-     
REMARK 630 YL(HYDROXY)METHYL]-4-CARBAMIMIDAMIDOBUTYL}-L-PROLINAMIDE             
REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 630  SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                           
REMARK 630                                                                      
REMARK 630   M RES C SSSEQI                                                     
REMARK 630     00Q H   343                                                      
REMARK 630 SOURCE: NULL                                                         
REMARK 630 TAXONOMY: NULL                                                       
REMARK 630 SUBCOMP:    DPN PRO THZ                                              
REMARK 630 DETAILS: NULL                                                        
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: CAT                                                 
REMARK 800 EVIDENCE_CODE: UNKNOWN                                               
REMARK 800 SITE_DESCRIPTION: ACTIVE SITE.                                       
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 00Q H 343                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA H 1                    
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA H 2                    
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN I OF HIRUGEN                
DBREF  1TBZ L   -7    17  UNP    P00734   THRB_HUMAN     328    363             
DBREF  1TBZ H   16   247  UNP    P00734   THRB_HUMAN     364    622             
DBREF  1TBZ I   53    64  UNP    P09945   ITH3_HIRME      60     71             
SEQRES   1 L   36  THR PHE GLY SER GLY GLU ALA ASP CYS GLY LEU ARG PRO          
SEQRES   2 L   36  LEU PHE GLU LYS LYS SER LEU GLU ASP LYS THR GLU ARG          
SEQRES   3 L   36  GLU LEU LEU GLU SER TYR ILE ASP GLY ARG                      
SEQRES   1 H  259  ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO          
SEQRES   2 H  259  TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU          
SEQRES   3 H  259  LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU          
SEQRES   4 H  259  THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS          
SEQRES   5 H  259  ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS          
SEQRES   6 H  259  HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE          
SEQRES   7 H  259  SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN          
SEQRES   8 H  259  TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS          
SEQRES   9 H  259  LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO          
SEQRES  10 H  259  VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU          
SEQRES  11 H  259  GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN          
SEQRES  12 H  259  LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN          
SEQRES  13 H  259  PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU          
SEQRES  14 H  259  ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR          
SEQRES  15 H  259  ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY          
SEQRES  16 H  259  LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO          
SEQRES  17 H  259  PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN          
SEQRES  18 H  259  MET GLY ILE VAL SER TRP GLY GLU GLY CYS ASP ARG ASP          
SEQRES  19 H  259  GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS          
SEQRES  20 H  259  LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE GLY GLU              
SEQRES   1 I   12  ASN GLY ASP PHE GLU GLU ILE PRO GLU GLU TYS LEU              
MODRES 1TBZ TYS I   63  TYR  O-SULFO-L-TYROSINE                                 
HET    TYS  I  63      16                                                       
HET    00Q  H 343      38                                                       
HET     NA  H   1       1                                                       
HET     NA  H   2       1                                                       
HETNAM     TYS O-SULFO-L-TYROSINE                                               
HETNAM     00Q D-PHENYLALANYL-N-{(1S)-1-[(S)-1,3-BENZOTHIAZOL-2-                
HETNAM   2 00Q  YL(HYDROXY)METHYL]-4-CARBAMIMIDAMIDOBUTYL}-L-                   
HETNAM   3 00Q  PROLINAMIDE                                                     
HETNAM      NA SODIUM ION                                                       
HETSYN     00Q RWJ-30353                                                        
FORMUL   3  TYS    C9 H11 N O6 S                                                
FORMUL   4  00Q    C27 H35 N7 O3 S                                              
FORMUL   5   NA    2(NA 1+)                                                     
FORMUL   7  HOH   *123(H2 O)                                                    
HELIX    1  H1 ALA H   55  LEU H   60  1                                   6    
HELIX    2  H2 GLU H  164  SER H  171  1                                   8    
HELIX    3  H3 ASP H  125  LEU H  129C 1                                   8    
HELIX    4  H4 VAL H  231  GLN H  244  1                                  14    
SHEET    1  B1 7 PRO H  28  ARG H  35  0                                        
SHEET    2  B1 7 CYS H  42  ASP H  49 -1                                        
SHEET    3  B1 7 ARG H  50  ALA H  56 -1                                        
SHEET    4  B1 7 ARG H 101  LYS H 110 -1                                        
SHEET    5  B1 7 LYS H  81  PRO H  92 -1                                        
SHEET    6  B1 7 ASP H  63  GLY H  69 -1                                        
SHEET    7  B1 7 PRO H  28  ARG H  35 -1                                        
SHEET    1  B2 7 GLY H 133  TRP H 141  0                                        
SHEET    2  B2 7 LEU H 155  ILE H 162 -1                                        
SHEET    3  B2 7 ASN H 179  PRO H 186 -1                                        
SHEET    4  B2 7 GLY H 223  THR H 229 -1                                        
SHEET    5  B2 7 ILE H 212  GLU H 217 -1                                        
SHEET    6  B2 7 GLY H 193  MET H 201 -1                                        
SHEET    7  B2 7 GLY H 133  TRP H 141 -1                                        
SSBOND   1 CYS L    1    CYS H  122                          1555   1555  2.03  
SSBOND   2 CYS H   42    CYS H   58                          1555   1555  2.10  
SSBOND   3 CYS H  168    CYS H  182                          1555   1555  2.06  
SSBOND   4 CYS H  191    CYS H  220                          1555   1555  2.04  
LINK         OG  SER H 195                 CY  00Q H 343     1555   1555  1.68  
LINK         C   GLU I  62                 N   TYS I  63     1555   1555  1.34  
LINK         C   TYS I  63                 N   LEU I  64     1555   1555  1.32  
LINK        NA    NA H   1                 O   ARG H 221A    1555   1555  2.15  
LINK        NA    NA H   1                 O   LYS H 224     1555   1555  2.08  
LINK        NA    NA H   1                 O   HOH H 731     1555   1555  3.02  
LINK        NA    NA H   2                 O   LYS H 169     1555   1555  2.59  
LINK        NA    NA H   2                 O   THR H 172     1555   1555  2.28  
LINK        NA    NA H   2                 O   PHE H 204A    1555   4546  2.56  
LINK        NA    NA H   2                 O   HOH H 627     1555   1555  2.93  
CISPEP   1 SER H   36A   PRO H   37          0        -3.47                     
SITE     1 CAT  3 HIS H  57  ASP H 102  SER H 195                               
SITE     1 AC1 18 HIS H  57  TYR H  60A TRP H  60D LYS H  60F                   
SITE     2 AC1 18 GLU H  97A ASP H 189  ALA H 190  CYS H 191                    
SITE     3 AC1 18 GLU H 192  GLY H 193  ASP H 194  SER H 195                    
SITE     4 AC1 18 SER H 214  TRP H 215  GLY H 216  GLY H 219                    
SITE     5 AC1 18 GLY H 226  HOH H 400                                          
SITE     1 AC2  3 ARG H 221A LYS H 224  HOH H 731                               
SITE     1 AC3  4 LYS H 169  THR H 172  PHE H 204A HOH H 627                    
SITE     1 AC4 14 PHE H  34  LYS H  36  GLN H  38  ARG H  73                    
SITE     2 AC4 14 THR H  74  ARG H  75  TYR H  76  LYS H  81                    
SITE     3 AC4 14 ILE H  82  SER H 153  HOH H 417  HOH H 453                    
SITE     4 AC4 14 HOH H 521  HOH I 660                                          
CRYST1   70.790   72.530   73.120  90.00 101.00  90.00 C 1 2 1       4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.014126  0.000000  0.002746        0.00000                         
SCALE2      0.000000  0.013787  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.013932        0.00000