PDB Short entry for 1TPL HEADER LYASE(CARBON-CARBON) 25-NOV-92 1TPL TITLE THE THREE-DIMENSIONAL STRUCTURE OF TYROSINE PHENOL-LYASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE PHENOL-LYASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.1.99.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CITROBACTER INTERMEDIUS; SOURCE 3 ORGANISM_TAXID: 66695 KEYWDS LYASE(CARBON-CARBON) EXPDTA X-RAY DIFFRACTION AUTHOR A.ANTSON,T.DEMIDKINA,Z.DAUTER,E.HARUTYUNYAN,K.WILSON REVDAT 7 14-FEB-24 1TPL 1 REMARK REVDAT 6 16-NOV-11 1TPL 1 HETATM REVDAT 5 13-JUL-11 1TPL 1 VERSN REVDAT 4 25-AUG-09 1TPL 1 SOURCE REVDAT 3 24-FEB-09 1TPL 1 VERSN REVDAT 2 01-APR-03 1TPL 1 JRNL REVDAT 1 31-OCT-93 1TPL 0 JRNL AUTH A.A.ANTSON,T.V.DEMIDKINA,P.GOLLNICK,Z.DAUTER,R.L.VON TERSCH, JRNL AUTH 2 J.LONG,S.N.BEREZHNOY,R.S.PHILLIPS,E.H.HARUTYUNYAN,K.S.WILSON JRNL TITL THREE-DIMENSIONAL STRUCTURE OF TYROSINE PHENOL-LYASE. JRNL REF BIOCHEMISTRY V. 32 4195 1993 JRNL REFN ISSN 0006-2960 JRNL PMID 7916622 JRNL DOI 10.1021/BI00067A006 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.A.ANTSON,B.V.STROKOPYTOV,G.N.MURSHUDOV,M.N.ISUPOV, REMARK 1 AUTH 2 E.H.HARUTYUNYAN,T.V.DEMIDKINA,D.G.VASSYLYEV,Z.DAUTER, REMARK 1 AUTH 3 H.TERRY,K.S.WILSON REMARK 1 TITL THE POLYPEPTIDE CHAIN FOLD IN TYROSINE PHENOL-LYASE, A REMARK 1 TITL 2 PYRIDOXAL-5'-PHOSPHATE-DEPENDENT ENZYME REMARK 1 REF FEBS LETT. V. 302 256 1992 REMARK 1 REFN ISSN 0014-5793 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 43205 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6724 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.012 ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 ABOUT 6% OF THE AMINO ACIDS HAVE POOR ELECTRON DENSITY AND REMARK 3 COULD NOT BE LOCATED. THESE RESIDUES LIE IN THREE LOOPS REMARK 3 ON THE SURFACE OF THE MOLECULE: RESIDUES 123 - 131, 384 - REMARK 3 398, 442 - 447 IN THE A CHAIN AND RESIDUES 123 - 133, 384 - REMARK 3 398, 442 - 445 IN THE B CHAIN. NO COORDINATES ARE PRESENT REMARK 3 FOR THESE RESIDUES. REMARK 4 REMARK 4 1TPL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000176786. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 38.01000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 69.13500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.01000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 69.13500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS TWO SUBUNITS OF THE TETRAMER. REMARK 300 COORDINATES FOR OTHER TWO SUBUNITS CAN BE GENERATED REMARK 300 USING CRYSTALLOGRAPHIC OPERATOR (76.02-X; -Y; Z). REMARK 300 REMARK 300 THE TRANSFORMATION PRESENTED ON *MTRIX* RECORDS BELOW WILL REMARK 300 YIELD APPROXIMATE COORDINATES FOR CHAIN *B* WHEN APPLIED TO REMARK 300 CHAIN *A* REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 17400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 60040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -190.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 76.02000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 637 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 123 REMARK 465 THR A 124 REMARK 465 THR A 125 REMARK 465 THR A 126 REMARK 465 ARG A 127 REMARK 465 TYR A 128 REMARK 465 HIS A 129 REMARK 465 GLN A 130 REMARK 465 GLU A 131 REMARK 465 ILE A 384 REMARK 465 SER A 385 REMARK 465 ALA A 386 REMARK 465 GLY A 387 REMARK 465 ARG A 388 REMARK 465 ASN A 389 REMARK 465 ASN A 390 REMARK 465 VAL A 391 REMARK 465 THR A 392 REMARK 465 GLY A 393 REMARK 465 GLU A 394 REMARK 465 HIS A 395 REMARK 465 HIS A 396 REMARK 465 ARG A 397 REMARK 465 PRO A 398 REMARK 465 GLU A 442 REMARK 465 PRO A 443 REMARK 465 LYS A 444 REMARK 465 GLN A 445 REMARK 465 LEU A 446 REMARK 465 ARG A 447 REMARK 465 PHE B 123 REMARK 465 THR B 124 REMARK 465 THR B 125 REMARK 465 THR B 126 REMARK 465 ARG B 127 REMARK 465 TYR B 128 REMARK 465 HIS B 129 REMARK 465 GLN B 130 REMARK 465 GLU B 131 REMARK 465 LYS B 132 REMARK 465 ASN B 133 REMARK 465 ILE B 384 REMARK 465 SER B 385 REMARK 465 ALA B 386 REMARK 465 GLY B 387 REMARK 465 ARG B 388 REMARK 465 ASN B 389 REMARK 465 ASN B 390 REMARK 465 VAL B 391 REMARK 465 THR B 392 REMARK 465 GLY B 393 REMARK 465 GLU B 394 REMARK 465 HIS B 395 REMARK 465 HIS B 396 REMARK 465 ARG B 397 REMARK 465 PRO B 398 REMARK 465 GLU B 442 REMARK 465 PRO B 443 REMARK 465 LYS B 444 REMARK 465 GLN B 445 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB TYR B 441 O HOH B 618 1.97 REMARK 500 CA TYR B 441 O HOH B 618 1.99 REMARK 500 O THR B 374 O HOH B 552 2.02 REMARK 500 O ARG B 404 O HOH B 655 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 503 O HOH B 503 2655 0.62 REMARK 500 O HOH B 471 O HOH B 471 2655 0.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 28 CG - SD - CE ANGL. DEV. = 10.1 DEGREES REMARK 500 TYR A 44 CB - CG - CD1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ASP A 46 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP A 58 CB - CG - OD1 ANGL. DEV. = 8.3 DEGREES REMARK 500 ASP A 58 CB - CG - OD2 ANGL. DEV. = -7.7 DEGREES REMARK 500 ARG A 100 CD - NE - CZ ANGL. DEV. = 9.7 DEGREES REMARK 500 ARG A 100 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 TYR A 122 CB - CG - CD1 ANGL. DEV. = 4.0 DEGREES REMARK 500 LEU A 186 CB - CA - C ANGL. DEV. = 12.4 DEGREES REMARK 500 ARG A 201 NE - CZ - NH1 ANGL. DEV. = -4.2 DEGREES REMARK 500 TYR A 223 CB - CG - CD1 ANGL. DEV. = -4.0 DEGREES REMARK 500 SER A 236 CB - CA - C ANGL. DEV. = -12.2 DEGREES REMARK 500 ASP A 249 CB - CG - OD1 ANGL. DEV. = -7.3 DEGREES REMARK 500 ASP A 258 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP A 271 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 297 NE - CZ - NH1 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 307 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES REMARK 500 TYR A 312 CB - CG - CD2 ANGL. DEV. = -3.7 DEGREES REMARK 500 GLU A 338 OE1 - CD - OE2 ANGL. DEV. = 7.7 DEGREES REMARK 500 ARG A 350 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 351 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 351 NE - CZ - NH2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG A 377 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 MET A 379 N - CA - CB ANGL. DEV. = -12.0 DEGREES REMARK 500 ASP B 46 CB - CG - OD2 ANGL. DEV. = 7.4 DEGREES REMARK 500 ASP B 58 CB - CG - OD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 ALA B 62 CB - CA - C ANGL. DEV. = 10.8 DEGREES REMARK 500 GLU B 75 CA - CB - CG ANGL. DEV. = 17.9 DEGREES REMARK 500 ARG B 82 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG B 100 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ASP B 159 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 GLU B 169 CA - CB - CG ANGL. DEV. = 15.7 DEGREES REMARK 500 LEU B 186 CB - CA - C ANGL. DEV. = 12.2 DEGREES REMARK 500 ARG B 198 CD - NE - CZ ANGL. DEV. = 13.3 DEGREES REMARK 500 ARG B 198 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 LEU B 203 CB - CA - C ANGL. DEV. = 11.5 DEGREES REMARK 500 TYR B 213 CB - CG - CD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 TYR B 213 CB - CG - CD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 TYR B 223 CB - CG - CD1 ANGL. DEV. = -4.2 DEGREES REMARK 500 ASP B 258 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 CYS B 268 CA - CB - SG ANGL. DEV. = 8.7 DEGREES REMARK 500 MET B 269 N - CA - CB ANGL. DEV. = 14.3 DEGREES REMARK 500 ARG B 297 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG B 297 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG B 307 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG B 318 NE - CZ - NH2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ALA B 349 CB - CA - C ANGL. DEV. = 9.2 DEGREES REMARK 500 ARG B 350 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG B 351 CD - NE - CZ ANGL. DEV. = 8.5 DEGREES REMARK 500 ARG B 351 NE - CZ - NH1 ANGL. DEV. = 4.9 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 55 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 7 45.52 -81.12 REMARK 500 MET A 18 45.61 74.22 REMARK 500 TYR A 33 19.53 56.60 REMARK 500 ARG A 217 52.25 -117.91 REMARK 500 LYS A 257 -107.02 -94.65 REMARK 500 ALA A 331 5.68 -67.34 REMARK 500 PHE A 361 73.48 42.87 REMARK 500 HIS A 430 17.64 -140.91 REMARK 500 ILE A 434 108.38 -57.31 REMARK 500 PHE A 439 93.20 -63.68 REMARK 500 PRO B 7 42.28 -78.84 REMARK 500 ASN B 185 42.75 -75.31 REMARK 500 LYS B 257 -101.56 -105.44 REMARK 500 SER B 290 -165.15 -128.80 REMARK 500 CYS B 353 73.84 -108.57 REMARK 500 GLN B 358 -37.65 -39.74 REMARK 500 PHE B 361 71.03 40.54 REMARK 500 ILE B 440 35.89 -148.41 REMARK 500 ARG B 447 73.09 -113.96 REMARK 500 PHE B 448 -53.38 -154.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 EACH SUBUNIT CONTAINS 14 ALPHA-HELICES AND TWO REMARK 700 BETA-SHEETS: LARGE AND SMALL. THE STRUCTURE ALSO REMARK 700 CONTAINS INTERSUBUNIT BETA-SHEET. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: PLA REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: PLB REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 457 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 457 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 458 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 458 DBREF 1TPL A 1 456 UNP P31012 TPL_ESCIN 1 456 DBREF 1TPL B 1 456 UNP P31012 TPL_ESCIN 1 456 SEQRES 1 A 456 MET ASN TYR PRO ALA GLU PRO PHE ARG ILE LYS SER VAL SEQRES 2 A 456 GLU THR VAL SER MET ILE PRO ARG ASP GLU ARG LEU LYS SEQRES 3 A 456 LYS MET GLN GLU ALA GLY TYR ASN THR PHE LEU LEU ASN SEQRES 4 A 456 SER LYS ASP ILE TYR ILE ASP LEU LEU THR ASP SER GLY SEQRES 5 A 456 THR ASN ALA MET SER ASP LYS GLN TRP ALA GLY MET MET SEQRES 6 A 456 MET GLY ASP GLU ALA TYR ALA GLY SER GLU ASN PHE TYR SEQRES 7 A 456 HIS LEU GLU ARG THR VAL GLN GLU LEU PHE GLY PHE LYS SEQRES 8 A 456 HIS ILE VAL PRO THR HIS GLN GLY ARG GLY ALA GLU ASN SEQRES 9 A 456 LEU LEU SER GLN LEU ALA ILE LYS PRO GLY GLN TYR VAL SEQRES 10 A 456 ALA GLY ASN MET TYR PHE THR THR THR ARG TYR HIS GLN SEQRES 11 A 456 GLU LYS ASN GLY ALA VAL PHE VAL ASP ILE VAL ARG ASP SEQRES 12 A 456 GLU ALA HIS ASP ALA GLY LEU ASN ILE ALA PHE LYS GLY SEQRES 13 A 456 ASP ILE ASP LEU LYS LYS LEU GLN LYS LEU ILE ASP GLU SEQRES 14 A 456 LYS GLY ALA GLU ASN ILE ALA TYR ILE CYS LEU ALA VAL SEQRES 15 A 456 THR VAL ASN LEU ALA GLY GLY GLN PRO VAL SER MET ALA SEQRES 16 A 456 ASN MET ARG ALA VAL ARG GLU LEU THR ALA ALA HIS GLY SEQRES 17 A 456 ILE LYS VAL PHE TYR ASP ALA THR ARG CYS VAL GLU ASN SEQRES 18 A 456 ALA TYR PHE ILE LYS GLU GLN GLU GLN GLY PHE GLU ASN SEQRES 19 A 456 LYS SER ILE ALA GLU ILE VAL HIS GLU MET PHE SER TYR SEQRES 20 A 456 ALA ASP GLY CYS THR MET SER GLY LYS LYS ASP CYS LEU SEQRES 21 A 456 VAL ASN ILE GLY GLY PHE LEU CYS MET ASN ASP ASP GLU SEQRES 22 A 456 MET PHE SER SER ALA LYS GLU LEU VAL VAL VAL TYR GLU SEQRES 23 A 456 GLY MET PRO SER TYR GLY GLY LEU ALA GLY ARG ASP MET SEQRES 24 A 456 GLU ALA MET ALA ILE GLY LEU ARG GLU ALA MET GLN TYR SEQRES 25 A 456 GLU TYR ILE GLU HIS ARG VAL LYS GLN VAL ARG TYR LEU SEQRES 26 A 456 GLY ASP LYS LEU LYS ALA ALA GLY VAL PRO ILE VAL GLU SEQRES 27 A 456 PRO VAL GLY GLY HIS ALA VAL PHE LEU ASP ALA ARG ARG SEQRES 28 A 456 PHE CYS GLU HIS LEU THR GLN ASP GLU PHE PRO ALA GLN SEQRES 29 A 456 SER LEU ALA ALA SER ILE TYR VAL GLU THR GLY VAL ARG SEQRES 30 A 456 SER MET GLU ARG GLY ILE ILE SER ALA GLY ARG ASN ASN SEQRES 31 A 456 VAL THR GLY GLU HIS HIS ARG PRO LYS LEU GLU THR VAL SEQRES 32 A 456 ARG LEU THR ILE PRO ARG ARG VAL TYR THR TYR ALA HIS SEQRES 33 A 456 MET ASP VAL VAL ALA ASP GLY ILE ILE LYS LEU TYR GLN SEQRES 34 A 456 HIS LYS GLU ASP ILE ARG GLY LEU LYS PHE ILE TYR GLU SEQRES 35 A 456 PRO LYS GLN LEU ARG PHE PHE THR ALA ARG PHE ASP TYR SEQRES 36 A 456 ILE SEQRES 1 B 456 MET ASN TYR PRO ALA GLU PRO PHE ARG ILE LYS SER VAL SEQRES 2 B 456 GLU THR VAL SER MET ILE PRO ARG ASP GLU ARG LEU LYS SEQRES 3 B 456 LYS MET GLN GLU ALA GLY TYR ASN THR PHE LEU LEU ASN SEQRES 4 B 456 SER LYS ASP ILE TYR ILE ASP LEU LEU THR ASP SER GLY SEQRES 5 B 456 THR ASN ALA MET SER ASP LYS GLN TRP ALA GLY MET MET SEQRES 6 B 456 MET GLY ASP GLU ALA TYR ALA GLY SER GLU ASN PHE TYR SEQRES 7 B 456 HIS LEU GLU ARG THR VAL GLN GLU LEU PHE GLY PHE LYS SEQRES 8 B 456 HIS ILE VAL PRO THR HIS GLN GLY ARG GLY ALA GLU ASN SEQRES 9 B 456 LEU LEU SER GLN LEU ALA ILE LYS PRO GLY GLN TYR VAL SEQRES 10 B 456 ALA GLY ASN MET TYR PHE THR THR THR ARG TYR HIS GLN SEQRES 11 B 456 GLU LYS ASN GLY ALA VAL PHE VAL ASP ILE VAL ARG ASP SEQRES 12 B 456 GLU ALA HIS ASP ALA GLY LEU ASN ILE ALA PHE LYS GLY SEQRES 13 B 456 ASP ILE ASP LEU LYS LYS LEU GLN LYS LEU ILE ASP GLU SEQRES 14 B 456 LYS GLY ALA GLU ASN ILE ALA TYR ILE CYS LEU ALA VAL SEQRES 15 B 456 THR VAL ASN LEU ALA GLY GLY GLN PRO VAL SER MET ALA SEQRES 16 B 456 ASN MET ARG ALA VAL ARG GLU LEU THR ALA ALA HIS GLY SEQRES 17 B 456 ILE LYS VAL PHE TYR ASP ALA THR ARG CYS VAL GLU ASN SEQRES 18 B 456 ALA TYR PHE ILE LYS GLU GLN GLU GLN GLY PHE GLU ASN SEQRES 19 B 456 LYS SER ILE ALA GLU ILE VAL HIS GLU MET PHE SER TYR SEQRES 20 B 456 ALA ASP GLY CYS THR MET SER GLY LYS LYS ASP CYS LEU SEQRES 21 B 456 VAL ASN ILE GLY GLY PHE LEU CYS MET ASN ASP ASP GLU SEQRES 22 B 456 MET PHE SER SER ALA LYS GLU LEU VAL VAL VAL TYR GLU SEQRES 23 B 456 GLY MET PRO SER TYR GLY GLY LEU ALA GLY ARG ASP MET SEQRES 24 B 456 GLU ALA MET ALA ILE GLY LEU ARG GLU ALA MET GLN TYR SEQRES 25 B 456 GLU TYR ILE GLU HIS ARG VAL LYS GLN VAL ARG TYR LEU SEQRES 26 B 456 GLY ASP LYS LEU LYS ALA ALA GLY VAL PRO ILE VAL GLU SEQRES 27 B 456 PRO VAL GLY GLY HIS ALA VAL PHE LEU ASP ALA ARG ARG SEQRES 28 B 456 PHE CYS GLU HIS LEU THR GLN ASP GLU PHE PRO ALA GLN SEQRES 29 B 456 SER LEU ALA ALA SER ILE TYR VAL GLU THR GLY VAL ARG SEQRES 30 B 456 SER MET GLU ARG GLY ILE ILE SER ALA GLY ARG ASN ASN SEQRES 31 B 456 VAL THR GLY GLU HIS HIS ARG PRO LYS LEU GLU THR VAL SEQRES 32 B 456 ARG LEU THR ILE PRO ARG ARG VAL TYR THR TYR ALA HIS SEQRES 33 B 456 MET ASP VAL VAL ALA ASP GLY ILE ILE LYS LEU TYR GLN SEQRES 34 B 456 HIS LYS GLU ASP ILE ARG GLY LEU LYS PHE ILE TYR GLU SEQRES 35 B 456 PRO LYS GLN LEU ARG PHE PHE THR ALA ARG PHE ASP TYR SEQRES 36 B 456 ILE HET SO4 A 457 5 HET SO4 A 458 5 HET SO4 B 457 5 HET SO4 B 458 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *450(H2 O) HELIX 1 A1 ARG A 21 GLU A 30 1 10 HELIX 2 A2 LYS A 59 MET A 64 1 6 HELIX 3 A3 GLU A 75 PHE A 88 1 14 HELIX 4 A4 ARG A 100 ALA A 110 1 11 HELIX 5 A5 LEU A 160 GLU A 169 1 10 HELIX 6 A6 MET A 194 ALA A 206 1 13 HELIX 7 A7 CYS A 218 GLN A 228 1 11 HELIX 8 A8 ILE A 237 MET A 244 1 8 HELIX 9 A9 ASP A 272 GLU A 286 1 15 HELIX 10 A10 GLY A 296 MET A 310 1 15 HELIX 11 A11 TYR A 312 ALA A 331 1 20 HELIX 12 A12 ALA A 349 PHE A 352 1 4 HELIX 13 A13 PRO A 362 THR A 374 1 13 HELIX 14 A14 TYR A 414 TYR A 428 1 15 HELIX 15 A1 ARG B 21 GLU B 30 1 10 HELIX 16 A2 LYS B 59 MET B 64 1 6 HELIX 17 A3 GLU B 75 PHE B 88 1 14 HELIX 18 A4 ARG B 100 ALA B 110 1 11 HELIX 19 A5 LEU B 160 GLU B 169 1 10 HELIX 20 A6 MET B 194 ALA B 206 1 13 HELIX 21 A7 CYS B 218 GLN B 228 1 11 HELIX 22 A8 ILE B 237 MET B 244 1 8 HELIX 23 A9 ASP B 272 GLU B 286 1 15 HELIX 24 A10 GLY B 296 MET B 310 1 15 HELIX 25 A11 TYR B 312 ALA B 331 1 20 HELIX 26 A12 ALA B 349 PHE B 352 1 4 HELIX 27 A13 PRO B 362 THR B 374 1 13 HELIX 28 A14 TYR B 414 TYR B 428 1 15 SHEET 1 LA 7 HIS A 92 THR A 96 0 SHEET 2 LA 7 GLY A 264 MET A 269 -1 SHEET 3 LA 7 ASP A 249 GLY A 255 -1 SHEET 4 LA 7 LYS A 210 ALA A 215 1 SHEET 5 LA 7 ALA A 176 VAL A 182 1 SHEET 6 LA 7 TYR A 116 GLY A 119 1 SHEET 7 LA 7 VAL A 136 ILE A 140 1 SHEET 1 SA 4 PRO A 335 VAL A 337 0 SHEET 2 SA 4 HIS A 343 ASP A 348 -1 SHEET 3 SA 4 THR A 402 ILE A 407 -1 SHEET 4 SA 4 MET A 379 ARG A 381 -1 SHEET 1 LB 7 HIS B 92 THR B 96 0 SHEET 2 LB 7 GLY B 264 MET B 269 -1 SHEET 3 LB 7 ASP B 249 GLY B 255 -1 SHEET 4 LB 7 LYS B 210 ALA B 215 1 SHEET 5 LB 7 ALA B 176 VAL B 182 1 SHEET 6 LB 7 TYR B 116 GLY B 119 1 SHEET 7 LB 7 VAL B 136 ILE B 140 1 SHEET 1 SB 4 PRO B 335 VAL B 337 0 SHEET 2 SB 4 HIS B 343 ASP B 348 -1 SHEET 3 SB 4 THR B 402 ILE B 407 -1 SHEET 4 SB 4 MET B 379 ARG B 381 -1 SHEET 1 IBS 4 MET A 56 ASP A 58 0 SHEET 2 IBS 4 ARG B 9 GLU B 14 1 SHEET 3 IBS 4 ARG A 9 GLU A 14 -1 SHEET 4 IBS 4 MET B 56 ASP B 58 1 CISPEP 1 VAL A 182 THR A 183 0 -4.11 CISPEP 2 GLU A 338 PRO A 339 0 1.82 CISPEP 3 VAL B 182 THR B 183 0 -5.13 CISPEP 4 GLU B 338 PRO B 339 0 -4.39 SITE 1 PLA 7 LYS A 257 ASP A 214 ASN A 185 TYR A 71 SITE 2 PLA 7 GLY A 99 ARG A 100 SER A 254 SITE 1 PLB 7 LYS B 257 ASP B 214 ASN B 185 TYR B 71 SITE 2 PLB 7 GLY B 99 ARG B 100 SER B 254 SITE 1 AC1 6 GLN A 98 GLY A 99 ARG A 100 SER A 254 SITE 2 AC1 6 LYS A 256 LYS A 257 SITE 1 AC2 7 GLN B 98 GLY B 99 ARG B 100 SER B 254 SITE 2 AC2 7 LYS B 256 LYS B 257 HOH B 541 SITE 1 AC3 3 PRO A 20 ARG A 21 ARG A 24 SITE 1 AC4 1 ARG B 24 CRYST1 76.020 138.270 93.540 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013154 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007232 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010691 0.00000 MTRIX1 1 -0.562100 -0.827100 0.000000 59.37500 1 MTRIX2 1 -0.827100 0.562100 0.000000 31.43700 1 MTRIX3 1 0.000000 0.000000 -1.000000 41.34500 1