PDB Short entry for 1TTU HEADER TRANSCRIPTION 23-JUN-04 1TTU TITLE CRYSTAL STRUCTURE OF CSL BOUND TO DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3'; COMPND 3 CHAIN: B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3'; COMPND 7 CHAIN: C; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: LIN-12 AND GLP-1 TRANSCRIPTIONAL REGULATOR; COMPND 11 CHAIN: A; COMPND 12 FRAGMENT: CONSERVED CORE (RESIDUES 192-663); COMPND 13 SYNONYM: CLS; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE SEQUENCE COMES FROM A REGION WITHIN THE MAMMALIAN SOURCE 4 HES-1 PROMOTER; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 OTHER_DETAILS: THE SEQUENCE COMES FROM A REGION WITHIN THE MAMMALIAN SOURCE 8 HES-1 PROMOTER; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 11 ORGANISM_TAXID: 6239; SOURCE 12 GENE: LAG-1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3)PLYSS; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 17 EXPRESSION_SYSTEM_PLASMID: PGEX6P-1 KEYWDS BETA-TREFOIL DOMAIN, PROTEIN-DNA COMPLEX, REL HOMOLOGY REGION, CSL, KEYWDS 2 NOTCH SIGNALING, TRANSCRIPTION FACTOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR R.A.KOVALL,W.A.HENDRICKSON REVDAT 4 14-FEB-24 1TTU 1 REMARK SEQADV REVDAT 3 24-FEB-09 1TTU 1 VERSN REVDAT 2 14-SEP-04 1TTU 1 JRNL REVDAT 1 31-AUG-04 1TTU 0 JRNL AUTH R.A.KOVALL,W.A.HENDRICKSON JRNL TITL CRYSTAL STRUCTURE OF THE NUCLEAR EFFECTOR OF NOTCH JRNL TITL 2 SIGNALING, CSL, BOUND TO DNA JRNL REF EMBO J. V. 23 3441 2004 JRNL REFN ISSN 0261-4189 JRNL PMID 15297877 JRNL DOI 10.1038/SJ.EMBOJ.7600349 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1124715.020 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 21051 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2085 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.03 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3162 REMARK 3 BIN R VALUE (WORKING SET) : 0.3160 REMARK 3 BIN FREE R VALUE : 0.4080 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 364 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.021 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3467 REMARK 3 NUCLEIC ACID ATOMS : 609 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 46 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 89.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.82000 REMARK 3 B22 (A**2) : 2.82000 REMARK 3 B33 (A**2) : -5.63000 REMARK 3 B12 (A**2) : 15.55000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.37 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.48 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.53 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.070 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 5.760 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 8.480 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 8.830 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 11.490; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 52.22 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : GLYCOL.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1TTU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUL-04. REMARK 100 THE DEPOSITION ID IS D_1000022894. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; NSLS REMARK 200 BEAMLINE : 31-ID; X4A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791, 0.9793, 0.9795, 0.9686; REMARK 200 0.9792 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22264 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.31300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES, AMMONIUM SULFATE, PEG 20K, REMARK 280 ETHYLENE GLYCOL, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.53467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.06933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 48.80200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 81.33667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 16.26733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 187 REMARK 465 PRO A 188 REMARK 465 LEU A 189 REMARK 465 GLY A 190 REMARK 465 SER A 191 REMARK 465 GLY A 192 REMARK 465 ASP A 193 REMARK 465 SER A 194 REMARK 465 LEU A 263 REMARK 465 LYS A 264 REMARK 465 ALA A 265 REMARK 465 SER A 266 REMARK 465 ALA A 267 REMARK 465 GLN A 268 REMARK 465 LYS A 269 REMARK 465 ASP A 270 REMARK 465 ALA A 271 REMARK 465 ALA A 272 REMARK 465 ILE A 273 REMARK 465 GLU A 274 REMARK 465 ASN A 275 REMARK 465 ASP A 276 REMARK 465 PRO A 277 REMARK 465 ILE A 278 REMARK 465 HIS A 279 REMARK 465 SER A 305 REMARK 465 THR A 306 REMARK 465 GLY A 307 REMARK 465 LYS A 308 REMARK 465 VAL A 309 REMARK 465 ARG A 310 REMARK 465 HIS A 311 REMARK 465 PRO A 312 REMARK 465 GLY A 313 REMARK 465 ASP A 314 REMARK 465 GLN A 315 REMARK 465 ARG A 316 REMARK 465 GLN A 317 REMARK 465 ASP A 318 REMARK 465 LEU A 661 REMARK 465 GLU A 662 REMARK 465 ARG A 663 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 196 -5.07 77.43 REMARK 500 ARG A 255 -14.29 -47.35 REMARK 500 VAL A 256 -61.38 -92.47 REMARK 500 TYR A 260 -71.95 -83.85 REMARK 500 LYS A 261 66.95 -54.15 REMARK 500 GLN A 281 -83.89 -36.98 REMARK 500 ARG A 299 92.80 -58.43 REMARK 500 ASP A 303 -105.43 -55.99 REMARK 500 ASN A 320 32.06 -98.88 REMARK 500 CYS A 325 142.59 -174.33 REMARK 500 CYS A 351 -7.79 -59.25 REMARK 500 THR A 379 107.55 -22.00 REMARK 500 ASP A 380 83.53 -53.46 REMARK 500 VAL A 403 7.27 -63.87 REMARK 500 ASN A 413 44.33 22.78 REMARK 500 ARG A 434 -99.17 -90.75 REMARK 500 LEU A 436 -126.25 76.71 REMARK 500 ASP A 440 -72.23 -113.44 REMARK 500 ALA A 443 168.61 177.71 REMARK 500 VAL A 444 3.49 -167.07 REMARK 500 ARG A 445 67.08 -62.17 REMARK 500 ILE A 464 144.34 -39.05 REMARK 500 ARG A 468 86.99 -32.00 REMARK 500 LYS A 476 87.41 48.93 REMARK 500 GLN A 477 13.91 41.61 REMARK 500 ASP A 482 129.83 -35.83 REMARK 500 ALA A 483 19.38 -61.51 REMARK 500 ASP A 502 -83.82 -65.45 REMARK 500 ASN A 503 74.27 -69.18 REMARK 500 GLU A 504 32.91 -65.48 REMARK 500 HIS A 512 69.79 37.61 REMARK 500 ASP A 513 43.95 34.85 REMARK 500 ILE A 523 11.13 56.67 REMARK 500 ASN A 524 172.65 152.57 REMARK 500 MET A 552 -143.15 -78.45 REMARK 500 VAL A 555 157.91 -40.95 REMARK 500 SER A 560 -82.29 17.44 REMARK 500 HIS A 573 -153.74 -109.59 REMARK 500 ASN A 589 40.68 -92.45 REMARK 500 ARG A 604 -69.59 -93.80 REMARK 500 GLU A 606 -9.24 -53.72 REMARK 500 ASN A 621 -168.76 -123.17 REMARK 500 TRP A 626 -73.00 -43.11 REMARK 500 THR A 632 -79.51 -85.83 REMARK 500 ASP A 645 -8.36 -43.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 51 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 52 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 53 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 54 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 55 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 56 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 57 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 58 DBREF 1TTU A 192 663 UNP Q9TYY1 Q9TYY1_CAEEL 192 663 DBREF 1TTU B 1 15 PDB 1TTU 1TTU 1 15 DBREF 1TTU C 1 15 PDB 1TTU 1TTU 1 15 SEQADV 1TTU GLY A 187 UNP Q9TYY1 CLONING ARTIFACT SEQADV 1TTU PRO A 188 UNP Q9TYY1 CLONING ARTIFACT SEQADV 1TTU LEU A 189 UNP Q9TYY1 CLONING ARTIFACT SEQADV 1TTU GLY A 190 UNP Q9TYY1 CLONING ARTIFACT SEQADV 1TTU SER A 191 UNP Q9TYY1 CLONING ARTIFACT SEQRES 1 B 15 DT DT DA DC DT DG DT DG DG DG DA DA DA SEQRES 2 B 15 DG DA SEQRES 1 C 15 DA DA DT DC DT DT DT DC DC DC DA DC DA SEQRES 2 C 15 DG DT SEQRES 1 A 477 GLY PRO LEU GLY SER GLY ASP SER VAL GLN SER LEU THR SEQRES 2 A 477 SER ASP ARG MET ILE ASP PHE LEU SER ASN LYS GLU LYS SEQRES 3 A 477 TYR GLU CYS VAL ILE SER ILE PHE HIS ALA LYS VAL ALA SEQRES 4 A 477 GLN LYS SER TYR GLY ASN GLU LYS ARG PHE PHE CYS PRO SEQRES 5 A 477 PRO PRO CYS ILE TYR LEU ILE GLY GLN GLY TRP LYS LEU SEQRES 6 A 477 LYS LYS ASP ARG VAL ALA GLN LEU TYR LYS THR LEU LYS SEQRES 7 A 477 ALA SER ALA GLN LYS ASP ALA ALA ILE GLU ASN ASP PRO SEQRES 8 A 477 ILE HIS GLU GLN GLN ALA THR GLU LEU VAL ALA TYR ILE SEQRES 9 A 477 GLY ILE GLY SER ASP THR SER GLU ARG GLN GLN LEU ASP SEQRES 10 A 477 PHE SER THR GLY LYS VAL ARG HIS PRO GLY ASP GLN ARG SEQRES 11 A 477 GLN ASP PRO ASN ILE TYR ASP TYR CYS ALA ALA LYS THR SEQRES 12 A 477 LEU TYR ILE SER ASP SER ASP LYS ARG LYS TYR PHE ASP SEQRES 13 A 477 LEU ASN ALA GLN PHE PHE TYR GLY CYS GLY MET GLU ILE SEQRES 14 A 477 GLY GLY PHE VAL SER GLN ARG ILE LYS VAL ILE SER LYS SEQRES 15 A 477 PRO SER LYS LYS LYS GLN SER MET LYS ASN THR ASP CYS SEQRES 16 A 477 LYS TYR LEU CYS ILE ALA SER GLY THR LYS VAL ALA LEU SEQRES 17 A 477 PHE ASN ARG LEU ARG SER GLN THR VAL SER THR ARG TYR SEQRES 18 A 477 LEU HIS VAL GLU GLY ASN ALA PHE HIS ALA SER SER THR SEQRES 19 A 477 LYS TRP GLY ALA PHE THR ILE HIS LEU PHE ASP ASP GLU SEQRES 20 A 477 ARG GLY LEU GLN GLU THR ASP ASN PHE ALA VAL ARG ASP SEQRES 21 A 477 GLY PHE VAL TYR TYR GLY SER VAL VAL LYS LEU VAL ASP SEQRES 22 A 477 SER VAL THR GLY ILE ALA LEU PRO ARG LEU ARG ILE ARG SEQRES 23 A 477 LYS VAL ASP LYS GLN GLN VAL ILE LEU ASP ALA SER CYS SEQRES 24 A 477 SER GLU GLU PRO VAL SER GLN LEU HIS LYS CYS ALA PHE SEQRES 25 A 477 GLN MET ILE ASP ASN GLU LEU VAL TYR LEU CYS LEU SER SEQRES 26 A 477 HIS ASP LYS ILE ILE GLN HIS GLN ALA THR ALA ILE ASN SEQRES 27 A 477 GLU HIS ARG HIS GLN ILE ASN ASP GLY ALA ALA TRP THR SEQRES 28 A 477 ILE ILE SER THR ASP LYS ALA GLU TYR ARG PHE PHE GLU SEQRES 29 A 477 ALA MET GLY GLN VAL ALA ASN PRO ILE SER PRO CYS PRO SEQRES 30 A 477 VAL VAL GLY SER LEU GLU VAL ASP GLY HIS GLY GLU ALA SEQRES 31 A 477 SER ARG VAL GLU LEU HIS GLY ARG ASP PHE LYS PRO ASN SEQRES 32 A 477 LEU LYS VAL TRP PHE GLY ALA THR PRO VAL GLU THR THR SEQRES 33 A 477 PHE ARG SER GLU GLU SER LEU HIS CYS SER ILE PRO PRO SEQRES 34 A 477 VAL SER GLN VAL ARG ASN GLU GLN THR HIS TRP MET PHE SEQRES 35 A 477 THR ASN ARG THR THR GLY ASP VAL GLU VAL PRO ILE SER SEQRES 36 A 477 LEU VAL ARG ASP ASP GLY VAL VAL TYR SER SER GLY LEU SEQRES 37 A 477 THR PHE SER TYR LYS SER LEU GLU ARG HET EDO A 51 4 HET EDO A 52 4 HET EDO A 53 4 HET EDO A 54 4 HET EDO A 55 4 HET EDO A 56 4 HET EDO A 57 4 HET EDO A 58 4 HET EDO A 59 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 4 EDO 9(C2 H6 O2) FORMUL 13 HOH *46(H2 O) HELIX 1 1 THR A 199 SER A 208 1 10 HELIX 2 2 ASN A 209 GLU A 214 1 6 HELIX 3 3 GLN A 247 LYS A 261 1 15 HELIX 4 4 ASP A 380 CYS A 385 1 6 HELIX 5 5 GLN A 401 THR A 405 5 5 HELIX 6 6 SER A 484 GLU A 488 5 5 HELIX 7 7 ASN A 531 ALA A 535 5 5 HELIX 8 8 HIS A 573 ALA A 576 5 4 HELIX 9 9 PRO A 615 ARG A 620 5 6 HELIX 10 10 ASN A 621 TRP A 626 1 6 SHEET 1 A12 THR A 597 PRO A 598 0 SHEET 2 A12 LEU A 590 PHE A 594 -1 N PHE A 594 O THR A 597 SHEET 3 A12 GLU A 637 ARG A 644 -1 O VAL A 643 N LYS A 591 SHEET 4 A12 VAL A 648 SER A 657 -1 O PHE A 656 N VAL A 638 SHEET 5 A12 TRP A 536 GLU A 550 -1 N PHE A 549 O VAL A 649 SHEET 6 A12 CYS A 215 ALA A 222 -1 N CYS A 215 O PHE A 548 SHEET 7 A12 CYS A 241 ILE A 245 -1 O CYS A 241 N PHE A 220 SHEET 8 A12 ILE A 321 ALA A 326 -1 O ASP A 323 N LEU A 244 SHEET 9 A12 CYS A 241 ILE A 245 -1 N LEU A 244 O ASP A 323 SHEET 10 A12 CYS A 215 ALA A 222 -1 N PHE A 220 O CYS A 241 SHEET 11 A12 TRP A 536 GLU A 550 -1 O PHE A 548 N CYS A 215 SHEET 12 A12 LYS A 495 GLN A 499 -1 N CYS A 496 O TRP A 536 SHEET 1 B12 TRP A 536 GLU A 550 0 SHEET 2 B12 LYS A 495 GLN A 499 -1 N CYS A 496 O TRP A 536 SHEET 3 B12 LEU A 469 ASP A 475 -1 N ARG A 470 O GLN A 499 SHEET 4 B12 GLN A 478 VAL A 479 -1 O GLN A 478 N ASP A 475 SHEET 5 B12 LEU A 469 ASP A 475 -1 N ASP A 475 O GLN A 478 SHEET 6 B12 VAL A 454 ASP A 459 -1 N VAL A 455 O LEU A 469 SHEET 7 B12 PHE A 425 LEU A 429 -1 N HIS A 428 O LYS A 456 SHEET 8 B12 LYS A 391 ASN A 396 -1 N VAL A 392 O PHE A 425 SHEET 9 B12 TRP A 536 GLU A 550 -1 O ILE A 539 N ALA A 393 SHEET 10 B12 LYS A 391 ASN A 396 -1 N ALA A 393 O ILE A 539 SHEET 11 B12 ARG A 406 GLU A 411 -1 O ARG A 406 N ASN A 396 SHEET 12 B12 ALA A 414 SER A 418 -1 O ALA A 414 N GLU A 411 SHEET 1 C 3 VAL A 224 GLN A 226 0 SHEET 2 C 3 ILE A 363 ILE A 366 1 O ILE A 366 N ALA A 225 SHEET 3 C 3 TYR A 340 PHE A 341 -1 N PHE A 341 O ILE A 363 SHEET 1 D 4 GLN A 300 LEU A 302 0 SHEET 2 D 4 LEU A 286 ILE A 292 -1 N ALA A 288 O LEU A 302 SHEET 3 D 4 LEU A 343 TYR A 349 -1 O PHE A 348 N VAL A 287 SHEET 4 D 4 GLU A 354 VAL A 359 -1 O GLY A 356 N PHE A 347 SHEET 1 E 2 CYS A 509 SER A 511 0 SHEET 2 E 2 LYS A 514 ILE A 516 -1 O ILE A 516 N CYS A 509 SHEET 1 F 4 VAL A 564 ASP A 571 0 SHEET 2 F 4 ARG A 578 ARG A 584 -1 O GLU A 580 N GLU A 569 SHEET 3 F 4 SER A 608 SER A 612 -1 O LEU A 609 N LEU A 581 SHEET 4 F 4 THR A 601 SER A 605 -1 N SER A 605 O SER A 608 CISPEP 1 CYS A 237 PRO A 238 0 -0.10 SITE 1 AC1 3 PHE A 220 TYR A 243 ILE A 245 SITE 1 AC2 7 PRO A 639 ILE A 640 SER A 641 SER A 651 SITE 2 AC2 7 SER A 652 GLY A 653 LEU A 654 SITE 1 AC3 4 CYS A 241 TYR A 243 TRP A 422 VAL A 461 SITE 1 AC4 3 EDO A 55 ALA A 544 GLU A 545 SITE 1 AC5 2 EDO A 54 ARG A 584 SITE 1 AC6 5 EDO A 58 VAL A 224 GLN A 226 PHE A 236 SITE 2 AC6 5 CYS A 237 SITE 1 AC7 7 PHE A 395 ASN A 396 ARG A 397 LYS A 495 SITE 2 AC7 7 ALA A 535 THR A 537 DG B 8 SITE 1 AC8 5 EDO A 56 GLN A 226 ARG A 234 PHE A 235 SITE 2 AC8 5 DT B 7 CRYST1 127.547 127.547 97.604 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007840 0.004527 0.000000 0.00000 SCALE2 0.000000 0.009053 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010245 0.00000