PDB Short entry for 1TXD HEADER SIGNALING PROTEIN 03-JUL-04 1TXD TITLE CRYSTAL STRUCTURE OF THE DH/PH DOMAINS OF LEUKEMIA-ASSOCIATED RHOGEF COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 12; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DH/PH DOMAINS; COMPND 5 SYNONYM: LEUKEMIA-ASSOCIATED RHOGEF; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ARHGEF12, LARG, KIAA0382; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA (DE3) PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMAL KEYWDS HELICAL BUNDLE (DH), BETA SANDWICH (PH), SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.KRISTELLY,G.GAO,J.J.TESMER REVDAT 6 14-FEB-24 1TXD 1 REMARK REVDAT 5 27-OCT-21 1TXD 1 SEQADV REVDAT 4 13-JUL-11 1TXD 1 VERSN REVDAT 3 24-FEB-09 1TXD 1 VERSN REVDAT 2 07-DEC-04 1TXD 1 JRNL REVDAT 1 21-SEP-04 1TXD 0 JRNL AUTH R.KRISTELLY,G.GAO,J.J.TESMER JRNL TITL STRUCTURAL DETERMINANTS OF RHOA BINDING AND NUCLEOTIDE JRNL TITL 2 EXCHANGE IN LEUKEMIA-ASSOCIATED RHO GUANINE-NUCLEOTIDE JRNL TITL 3 EXCHANGE FACTOR. JRNL REF J.BIOL.CHEM. V. 279 47352 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15331592 JRNL DOI 10.1074/JBC.M406056200 REMARK 2 REMARK 2 RESOLUTION. 2.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : -1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 35784 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1883 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.13 REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 REFLECTION IN BIN (WORKING SET) : 2315 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3160 REMARK 3 BIN FREE R VALUE SET COUNT : 115 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2881 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 91 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.28000 REMARK 3 B22 (A**2) : -0.08000 REMARK 3 B33 (A**2) : 0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.62000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.176 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.168 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.136 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.137 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2922 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2749 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3937 ; 1.486 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6410 ; 0.824 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 348 ; 6.341 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 456 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3142 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 559 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 616 ; 0.222 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3036 ; 0.221 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1836 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 93 ; 0.209 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.161 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 77 ; 0.213 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.219 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1760 ; 1.302 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2863 ; 2.114 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1162 ; 2.142 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1074 ; 3.311 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 92 REMARK 3 RESIDUE RANGE : A 766 A 986 REMARK 3 ORIGIN FOR THE GROUP (A): 40.2866 29.9049 16.2992 REMARK 3 T TENSOR REMARK 3 T11: 0.1196 T22: 0.1036 REMARK 3 T33: 0.0752 T12: 0.0549 REMARK 3 T13: -0.0566 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 0.7372 L22: 2.9169 REMARK 3 L33: 4.0720 L12: -0.0003 REMARK 3 L13: -0.8522 L23: 1.9243 REMARK 3 S TENSOR REMARK 3 S11: -0.0396 S12: 0.1204 S13: 0.0056 REMARK 3 S21: -0.4201 S22: -0.0922 S23: -0.0664 REMARK 3 S31: 0.2446 S32: -0.0953 S33: 0.1318 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 987 A 1138 REMARK 3 ORIGIN FOR THE GROUP (A): 4.5865 44.3659 34.8649 REMARK 3 T TENSOR REMARK 3 T11: 0.0153 T22: 0.3296 REMARK 3 T33: 0.2052 T12: -0.0017 REMARK 3 T13: 0.0511 T23: -0.0537 REMARK 3 L TENSOR REMARK 3 L11: 25.9284 L22: -0.2768 REMARK 3 L33: 4.6215 L12: 0.9870 REMARK 3 L13: -2.1410 L23: 0.4026 REMARK 3 S TENSOR REMARK 3 S11: -0.7018 S12: -0.0102 S13: 1.5445 REMARK 3 S21: 0.6901 S22: 1.0275 S23: -0.1524 REMARK 3 S31: -0.1348 S32: -0.2380 S33: -0.3257 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1TXD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUL-04. REMARK 100 THE DEPOSITION ID IS D_1000022998. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-AUG-02 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI (111) DOUBLE-CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36990 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.130 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.36500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, SODIUM CHLORIDE, SODIUM REMARK 280 CITRATE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 96.80300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.92950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 96.80300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.92950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 764 REMARK 465 SER A 765 REMARK 465 LYS A 1000 REMARK 465 LEU A 1001 REMARK 465 SER A 1002 REMARK 465 GLU A 1003 REMARK 465 TYR A 1004 REMARK 465 PRO A 1005 REMARK 465 ASN A 1006 REMARK 465 HIS A 1062 REMARK 465 SER A 1063 REMARK 465 LYS A 1064 REMARK 465 ILE A 1065 REMARK 465 LEU A 1066 REMARK 465 ALA A 1067 REMARK 465 SER A 1068 REMARK 465 THR A 1069 REMARK 465 ALA A 1070 REMARK 465 ASP A 1071 REMARK 465 SER A 1072 REMARK 465 LYS A 1073 REMARK 465 HIS A 1074 REMARK 465 ASP A 1093 REMARK 465 VAL A 1139 REMARK 465 ASP A 1140 REMARK 465 GLY A 1141 REMARK 465 GLY A 1142 REMARK 465 HIS A 1143 REMARK 465 HIS A 1144 REMARK 465 HIS A 1145 REMARK 465 HIS A 1146 REMARK 465 HIS A 1147 REMARK 465 HIS A 1148 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 810 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 837 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A 914 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 772 -71.37 -54.36 REMARK 500 PHE A 813 -65.49 -103.63 REMARK 500 SER A 833 -118.60 40.38 REMARK 500 SER A 859 -0.77 65.77 REMARK 500 ASP A 862 -119.11 -94.66 REMARK 500 PRO A 931 6.24 -64.88 REMARK 500 ASP A1054 -120.25 56.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE IN THE GB (ACCESSION CODE BAA20836), IT CLEARLY SHOWS REMARK 999 THAT 973 IS A PHE, NOT TYR. DBREF 1TXD A 764 1138 UNP Q9NZN5 ARHGC_HUMAN 764 1138 SEQADV 1TXD GLY A 764 UNP Q9NZN5 THR 764 CLONING ARTIFACT SEQADV 1TXD SER A 765 UNP Q9NZN5 ASP 765 CLONING ARTIFACT SEQADV 1TXD PHE A 973 UNP Q9NZN5 TYR 973 ENGINEERED MUTATION SEQADV 1TXD VAL A 1139 UNP Q9NZN5 CLONING ARTIFACT SEQADV 1TXD ASP A 1140 UNP Q9NZN5 CLONING ARTIFACT SEQADV 1TXD GLY A 1141 UNP Q9NZN5 CLONING ARTIFACT SEQADV 1TXD GLY A 1142 UNP Q9NZN5 CLONING ARTIFACT SEQADV 1TXD HIS A 1143 UNP Q9NZN5 EXPRESSION TAG SEQADV 1TXD HIS A 1144 UNP Q9NZN5 EXPRESSION TAG SEQADV 1TXD HIS A 1145 UNP Q9NZN5 EXPRESSION TAG SEQADV 1TXD HIS A 1146 UNP Q9NZN5 EXPRESSION TAG SEQADV 1TXD HIS A 1147 UNP Q9NZN5 EXPRESSION TAG SEQADV 1TXD HIS A 1148 UNP Q9NZN5 EXPRESSION TAG SEQRES 1 A 385 GLY SER PRO PRO ASN TRP GLN GLN LEU VAL SER ARG GLU SEQRES 2 A 385 VAL LEU LEU GLY LEU LYS PRO CYS GLU ILE LYS ARG GLN SEQRES 3 A 385 GLU VAL ILE ASN GLU LEU PHE TYR THR GLU ARG ALA HIS SEQRES 4 A 385 VAL ARG THR LEU LYS VAL LEU ASP GLN VAL PHE TYR GLN SEQRES 5 A 385 ARG VAL SER ARG GLU GLY ILE LEU SER PRO SER GLU LEU SEQRES 6 A 385 ARG LYS ILE PHE SER ASN LEU GLU ASP ILE LEU GLN LEU SEQRES 7 A 385 HIS ILE GLY LEU ASN GLU GLN MET LYS ALA VAL ARG LYS SEQRES 8 A 385 ARG ASN GLU THR SER VAL ILE ASP GLN ILE GLY GLU ASP SEQRES 9 A 385 LEU LEU THR TRP PHE SER GLY PRO GLY GLU GLU LYS LEU SEQRES 10 A 385 LYS HIS ALA ALA ALA THR PHE CYS SER ASN GLN PRO PHE SEQRES 11 A 385 ALA LEU GLU MET ILE LYS SER ARG GLN LYS LYS ASP SER SEQRES 12 A 385 ARG PHE GLN THR PHE VAL GLN ASP ALA GLU SER ASN PRO SEQRES 13 A 385 LEU CYS ARG ARG LEU GLN LEU LYS ASP ILE ILE PRO THR SEQRES 14 A 385 GLN MET GLN ARG LEU THR LYS TYR PRO LEU LEU LEU ASP SEQRES 15 A 385 ASN ILE ALA LYS TYR THR GLU TRP PRO THR GLU ARG GLU SEQRES 16 A 385 LYS VAL LYS LYS ALA ALA ASP HIS CYS ARG GLN ILE LEU SEQRES 17 A 385 ASN PHE VAL ASN GLN ALA VAL LYS GLU ALA GLU ASN LYS SEQRES 18 A 385 GLN ARG LEU GLU ASP TYR GLN ARG ARG LEU ASP THR SER SEQRES 19 A 385 SER LEU LYS LEU SER GLU TYR PRO ASN VAL GLU GLU LEU SEQRES 20 A 385 ARG ASN LEU ASP LEU THR LYS ARG LYS MET ILE HIS GLU SEQRES 21 A 385 GLY PRO LEU VAL TRP LYS VAL ASN ARG ASP LYS THR ILE SEQRES 22 A 385 ASP LEU TYR THR LEU LEU LEU GLU ASP ILE LEU VAL LEU SEQRES 23 A 385 LEU GLN LYS GLN ASP ASP ARG LEU VAL LEU ARG CYS HIS SEQRES 24 A 385 SER LYS ILE LEU ALA SER THR ALA ASP SER LYS HIS THR SEQRES 25 A 385 PHE SER PRO VAL ILE LYS LEU SER THR VAL LEU VAL ARG SEQRES 26 A 385 GLN VAL ALA THR ASP ASN LYS ALA LEU PHE VAL ILE SER SEQRES 27 A 385 MET SER ASP ASN GLY ALA GLN ILE TYR GLU LEU VAL ALA SEQRES 28 A 385 GLN THR VAL SER GLU LYS THR VAL TRP GLN ASP LEU ILE SEQRES 29 A 385 CYS ARG MET ALA ALA SER VAL LYS GLU GLN SER VAL ASP SEQRES 30 A 385 GLY GLY HIS HIS HIS HIS HIS HIS FORMUL 2 HOH *91(H2 O) HELIX 1 1 ASN A 768 VAL A 773 1 6 HELIX 2 2 SER A 774 LEU A 779 1 6 HELIX 3 3 LYS A 782 PHE A 813 1 32 HELIX 4 4 PHE A 813 GLY A 821 1 9 HELIX 5 5 SER A 824 SER A 833 1 10 HELIX 6 6 ASN A 834 LYS A 854 1 21 HELIX 7 7 ILE A 864 SER A 873 1 10 HELIX 8 8 GLY A 874 ASN A 890 1 17 HELIX 9 9 ASN A 890 ASP A 905 1 16 HELIX 10 10 ASP A 905 ASN A 918 1 14 HELIX 11 11 PRO A 919 ARG A 922 5 4 HELIX 12 12 GLN A 925 ILE A 930 1 6 HELIX 13 13 PRO A 931 TYR A 950 1 20 HELIX 14 14 TRP A 953 ARG A 993 1 41 HELIX 15 15 VAL A 1007 ASN A 1012 1 6 HELIX 16 16 ASP A 1014 ARG A 1018 5 5 HELIX 17 17 THR A 1116 SER A 1138 1 23 SHEET 1 A 4 LEU A 994 ASP A 995 0 SHEET 2 A 4 ARG A1056 VAL A1058 1 O LEU A1057 N ASP A 995 SHEET 3 A 4 ILE A1046 GLN A1053 -1 N GLN A1051 O VAL A1058 SHEET 4 A 4 VAL A1079 LYS A1081 -1 O ILE A1080 N LEU A1047 SHEET 1 B 8 LEU A 994 ASP A 995 0 SHEET 2 B 8 ARG A1056 VAL A1058 1 O LEU A1057 N ASP A 995 SHEET 3 B 8 ILE A1046 GLN A1053 -1 N GLN A1051 O VAL A1058 SHEET 4 B 8 LEU A1038 LEU A1043 -1 N LEU A1043 O ILE A1046 SHEET 5 B 8 MET A1020 LYS A1029 -1 N GLY A1024 O THR A1040 SHEET 6 B 8 ALA A1107 VAL A1113 -1 O GLU A1111 N LYS A1029 SHEET 7 B 8 ALA A1096 MET A1102 -1 N VAL A1099 O TYR A1110 SHEET 8 B 8 VAL A1085 GLN A1089 -1 N ARG A1088 O PHE A1098 CRYST1 193.606 45.859 74.730 90.00 107.49 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005165 0.000000 0.001627 0.00000 SCALE2 0.000000 0.021806 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014030 0.00000