PDB Short entry for 1US7 HEADER CHAPERONE 20-NOV-03 1US7 TITLE COMPLEX OF HSP90 AND P50 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAT SHOCK PROTEIN HSP82; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN, RESIDUES 1-214; COMPND 5 SYNONYM: HSP82, HSP90, YPL240C; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HSP90 CO-CHAPERONE CDC37; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: C-TERMINAL DOMAIN, RESIDUES 125-378; COMPND 11 SYNONYM: P50, HSP90 CHAPERONE PROTEIN KINASE-TARGETING SUBUNIT, COMPND 12 P50CDC37, CDC37; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CHAPERONE CO-CHAPERONE REGULATION, CHAPERONE, ATP-BINDING, HEAT SHOCK EXPDTA X-RAY DIFFRACTION AUTHOR S.M.ROE,M.M.U.ALI,L.H.PEARL REVDAT 5 13-DEC-23 1US7 1 REMARK REVDAT 4 03-APR-19 1US7 1 REMARK REVDAT 3 13-JUL-11 1US7 1 VERSN REVDAT 2 24-FEB-09 1US7 1 VERSN REVDAT 1 15-JAN-04 1US7 0 JRNL AUTH S.M.ROE,M.M.U.ALI,P.MEYER,C.K.VAUGHAN,B.PANARETOU,P.W.PIPER, JRNL AUTH 2 C.PRODROMOU,L.H.PEARL JRNL TITL THE MECHANISM OF HSP90 REGULATION BY THE PROTEIN JRNL TITL 2 KINASE-SPECIFIC COCHAPERONE P50(CDC37) JRNL REF CELL(CAMBRIDGE,MASS.) V. 116 87 2004 JRNL REFN ISSN 0092-8674 JRNL PMID 14718169 JRNL DOI 10.1016/S0092-8674(03)01027-4 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 25125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1333 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1839 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2160 REMARK 3 BIN FREE R VALUE SET COUNT : 91 REMARK 3 BIN FREE R VALUE : 0.3380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3238 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 176 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.49000 REMARK 3 B22 (A**2) : -0.49000 REMARK 3 B33 (A**2) : 0.74000 REMARK 3 B12 (A**2) : -0.25000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.239 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.211 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.123 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.996 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3292 ; 0.030 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4423 ; 2.075 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 396 ; 7.574 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 487 ; 0.157 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2451 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1479 ; 0.230 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 175 ; 0.191 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 39 ; 0.306 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.303 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1986 ; 1.379 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3205 ; 2.523 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1306 ; 4.259 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1218 ; 6.880 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 207 REMARK 3 ORIGIN FOR THE GROUP (A): 53.7282 58.4812 4.9341 REMARK 3 T TENSOR REMARK 3 T11: 0.1019 T22: 0.1941 REMARK 3 T33: 0.1137 T12: 0.0322 REMARK 3 T13: 0.0114 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 0.7418 L22: 0.6847 REMARK 3 L33: 0.7169 L12: -0.0162 REMARK 3 L13: 0.2565 L23: 0.1640 REMARK 3 S TENSOR REMARK 3 S11: -0.0234 S12: -0.1178 S13: -0.0287 REMARK 3 S21: -0.0319 S22: 0.0153 S23: 0.0217 REMARK 3 S31: -0.0423 S32: 0.1085 S33: 0.0081 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 148 B 286 REMARK 3 ORIGIN FOR THE GROUP (A): 52.4308 53.0334 -25.4091 REMARK 3 T TENSOR REMARK 3 T11: 0.1944 T22: 0.1355 REMARK 3 T33: 0.1410 T12: 0.0477 REMARK 3 T13: -0.0069 T23: -0.0292 REMARK 3 L TENSOR REMARK 3 L11: 0.4219 L22: 0.4698 REMARK 3 L33: 0.4419 L12: 0.2255 REMARK 3 L13: 0.1576 L23: -0.4346 REMARK 3 S TENSOR REMARK 3 S11: -0.0590 S12: -0.0569 S13: 0.0316 REMARK 3 S21: -0.2776 S22: 0.0513 S23: -0.0016 REMARK 3 S31: 0.1602 S32: 0.1151 S33: 0.0076 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 287 B 347 REMARK 3 ORIGIN FOR THE GROUP (A): 1.3337 42.5906 -45.4927 REMARK 3 T TENSOR REMARK 3 T11: 0.1963 T22: 0.0266 REMARK 3 T33: 0.3401 T12: -0.0716 REMARK 3 T13: -0.0149 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 2.6199 L22: 3.4618 REMARK 3 L33: 5.2161 L12: -0.8612 REMARK 3 L13: 0.2199 L23: -1.1040 REMARK 3 S TENSOR REMARK 3 S11: 0.0392 S12: -0.0995 S13: 0.4023 REMARK 3 S21: 0.0127 S22: 0.0582 S23: 0.4613 REMARK 3 S31: -0.4912 S32: -0.4311 S33: -0.0974 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1US7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-NOV-03. REMARK 100 THE DEPOSITION ID IS D_1290014012. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9202 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26462 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 36.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.40400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1AMW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS OF THE COMPLEX WERE GROWN REMARK 280 FROM A MIXTURE OF N-HSP90 AND C-P50 AT A FINAL CONCENTRATION OF REMARK 280 0.5MM AND 0.4MM RESPECTIVELY, IN A SOLUTION CONTAINING 12% REMARK 280 POLYETHYLENE GLYCOL 4000, 16% ISOPROPANOL AND 100MM SODIUM REMARK 280 CITRATE, PH 6.0. CRYSTAL DROPS WERE SET UP USING THE HANGING- REMARK 280 DROP VAPOUR DIFFUSION METHOD, INITIALLY AT 4 DEGREES C FOR 48 REMARK 280 HOURS AND THEN TRANSFERRED TO 14 DEGREES C., PH 6.00, VAPOR REMARK 280 DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.48167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 98.96333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 98.96333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 49.48167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2059 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 FUNCTION: HSP82 IS AN ESSENTIAL PROTEIN THAT IS REQUIRED BY CELLS REMARK 400 IN HIGHER CONCENTRATIONS FOR GROWTH AT HIGHER TEMPERATURES. REMARK 400 CDC37 CO-CHAPERONE BINDS TO NUMEROUS KINASES REMARK 400 AND PROMOTES THEIR INTERACTION WITH THE HSP90 COMPLEX, REMARK 400 RESULTING IN STABILIZATION AND PROMOTION OF THEIR ACTIVITY REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 209 REMARK 465 THR A 210 REMARK 465 LYS A 211 REMARK 465 GLU A 212 REMARK 465 VAL A 213 REMARK 465 GLU A 214 REMARK 465 MET B 114 REMARK 465 ARG B 115 REMARK 465 GLY B 116 REMARK 465 SER B 117 REMARK 465 HIS B 118 REMARK 465 HIS B 119 REMARK 465 HIS B 120 REMARK 465 HIS B 121 REMARK 465 HIS B 122 REMARK 465 HIS B 123 REMARK 465 GLY B 124 REMARK 465 MET B 125 REMARK 465 ALA B 126 REMARK 465 SER B 127 REMARK 465 MET B 128 REMARK 465 VAL B 129 REMARK 465 ASN B 130 REMARK 465 THR B 131 REMARK 465 LYS B 132 REMARK 465 PRO B 133 REMARK 465 GLU B 134 REMARK 465 LYS B 135 REMARK 465 THR B 136 REMARK 465 GLU B 137 REMARK 465 GLU B 138 REMARK 465 ASP B 139 REMARK 465 SER B 140 REMARK 465 GLU B 141 REMARK 465 GLU B 142 REMARK 465 VAL B 143 REMARK 465 ARG B 144 REMARK 465 GLU B 145 REMARK 465 GLN B 146 REMARK 465 LYS B 147 REMARK 465 PHE B 309 REMARK 465 ASP B 310 REMARK 465 VAL B 311 REMARK 465 LYS B 312 REMARK 465 ASP B 313 REMARK 465 VAL B 314 REMARK 465 GLN B 315 REMARK 465 SER B 349 REMARK 465 GLU B 350 REMARK 465 ALA B 351 REMARK 465 LYS B 352 REMARK 465 GLU B 353 REMARK 465 GLY B 354 REMARK 465 GLU B 355 REMARK 465 GLU B 356 REMARK 465 ALA B 357 REMARK 465 GLY B 358 REMARK 465 PRO B 359 REMARK 465 GLY B 360 REMARK 465 ASP B 361 REMARK 465 PRO B 362 REMARK 465 LEU B 363 REMARK 465 LEU B 364 REMARK 465 GLU B 365 REMARK 465 ALA B 366 REMARK 465 VAL B 367 REMARK 465 PRO B 368 REMARK 465 LYS B 369 REMARK 465 THR B 370 REMARK 465 GLY B 371 REMARK 465 ASP B 372 REMARK 465 GLU B 373 REMARK 465 LYS B 374 REMARK 465 ASP B 375 REMARK 465 VAL B 376 REMARK 465 SER B 377 REMARK 465 VAL B 378 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 208 CA C O CB CG1 CG2 REMARK 470 LYS B 347 CG CD CE NZ REMARK 470 ALA B 348 CA C O CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2052 O HOH A 2099 1.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2007 O HOH A 2007 4555 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL B 209 CB VAL B 209 CG1 0.138 REMARK 500 MET B 249 SD MET B 249 CE -0.435 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 113 CB - CG - OD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 ASP A 179 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 LEU A 207 O - C - N ANGL. DEV. = -19.4 DEGREES REMARK 500 ARG B 166 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG B 166 NE - CZ - NH2 ANGL. DEV. = -8.1 DEGREES REMARK 500 ARG B 167 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG B 167 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ASP B 169 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP B 170 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP B 177 CB - CG - OD2 ANGL. DEV. = 8.1 DEGREES REMARK 500 MET B 249 CG - SD - CE ANGL. DEV. = -10.3 DEGREES REMARK 500 ARG B 264 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ASP B 328 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP B 338 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 24 122.58 -26.88 REMARK 500 ASN A 26 60.78 -102.68 REMARK 500 ASP A 52 70.34 -150.98 REMARK 500 GLU A 59 87.70 -170.41 REMARK 500 SER A 80 44.35 -98.76 REMARK 500 THR A 95 -62.11 -131.08 REMARK 500 ARG B 166 -47.34 -156.87 REMARK 500 ASN B 178 62.87 -152.14 REMARK 500 LYS B 227 -20.03 75.34 REMARK 500 PRO B 302 150.09 -48.47 REMARK 500 GLU B 304 -55.88 134.85 REMARK 500 SER B 322 24.18 -69.66 REMARK 500 ASP B 325 145.20 161.25 REMARK 500 PRO B 326 -91.55 -54.92 REMARK 500 LYS B 347 -58.60 -17.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU B 304 LEU B 305 -143.68 REMARK 500 LEU B 305 GLN B 306 -136.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1A4H RELATED DB: PDB REMARK 900 STRUCTURE OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE IN REMARK 900 COMPLEX WITH GELDANAMYCIN REMARK 900 RELATED ID: 1AH6 RELATED DB: PDB REMARK 900 STRUCTURE OF THE TETRAGONAL FORM OF THE N -TERMINAL DOMAIN OF THE REMARK 900 YEAST HSP90 CHAPERONE REMARK 900 RELATED ID: 1AH8 RELATED DB: PDB REMARK 900 STRUCTURE OF THE ORTHORHOMBIC FORM OF THE N-TERMINAL DOMAIN OF THE REMARK 900 YEAST HSP90 CHAPERONE REMARK 900 RELATED ID: 1AM1 RELATED DB: PDB REMARK 900 ATP BINDING SITE IN THE HSP90 MOLECULAR CHAPERONE REMARK 900 RELATED ID: 1AMW RELATED DB: PDB REMARK 900 ADP BINDING SITE IN THE HSP90 MOLECULAR CHAPERONE REMARK 900 RELATED ID: 1BGQ RELATED DB: PDB REMARK 900 RADICICOL BOUND TO THE ATP BINDING SITE OF THE N-TERMINAL DOMAIN OF REMARK 900 THE YEAST HSP90 CHAPERONE REMARK 900 RELATED ID: 1HK7 RELATED DB: PDB REMARK 900 MIDDLE DOMAIN OF HSP90 DBREF 1US7 A 1 214 UNP P02829 HS82_YEAST 1 214 DBREF 1US7 B 114 126 PDB 1US7 1US7 114 126 DBREF 1US7 B 127 378 UNP Q16543 CC37_HUMAN 127 378 SEQRES 1 A 214 MET ALA SER GLU THR PHE GLU PHE GLN ALA GLU ILE THR SEQRES 2 A 214 GLN LEU MET SER LEU ILE ILE ASN THR VAL TYR SER ASN SEQRES 3 A 214 LYS GLU ILE PHE LEU ARG GLU LEU ILE SER ASN ALA SER SEQRES 4 A 214 ASP ALA LEU ASP LYS ILE ARG TYR LYS SER LEU SER ASP SEQRES 5 A 214 PRO LYS GLN LEU GLU THR GLU PRO ASP LEU PHE ILE ARG SEQRES 6 A 214 ILE THR PRO LYS PRO GLU GLN LYS VAL LEU GLU ILE ARG SEQRES 7 A 214 ASP SER GLY ILE GLY MET THR LYS ALA GLU LEU ILE ASN SEQRES 8 A 214 ASN LEU GLY THR ILE ALA LYS SER GLY THR LYS ALA PHE SEQRES 9 A 214 MET GLU ALA LEU SER ALA GLY ALA ASP VAL SER MET ILE SEQRES 10 A 214 GLY GLN PHE GLY VAL GLY PHE TYR SER LEU PHE LEU VAL SEQRES 11 A 214 ALA ASP ARG VAL GLN VAL ILE SER LYS SER ASN ASP ASP SEQRES 12 A 214 GLU GLN TYR ILE TRP GLU SER ASN ALA GLY GLY SER PHE SEQRES 13 A 214 THR VAL THR LEU ASP GLU VAL ASN GLU ARG ILE GLY ARG SEQRES 14 A 214 GLY THR ILE LEU ARG LEU PHE LEU LYS ASP ASP GLN LEU SEQRES 15 A 214 GLU TYR LEU GLU GLU LYS ARG ILE LYS GLU VAL ILE LYS SEQRES 16 A 214 ARG HIS SER GLU PHE VAL ALA TYR PRO ILE GLN LEU VAL SEQRES 17 A 214 VAL THR LYS GLU VAL GLU SEQRES 1 B 265 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 B 265 SER MET VAL ASN THR LYS PRO GLU LYS THR GLU GLU ASP SEQRES 3 B 265 SER GLU GLU VAL ARG GLU GLN LYS HIS LYS THR PHE VAL SEQRES 4 B 265 GLU LYS TYR GLU LYS GLN ILE LYS HIS PHE GLY MET LEU SEQRES 5 B 265 ARG ARG TRP ASP ASP SER GLN LYS TYR LEU SER ASP ASN SEQRES 6 B 265 VAL HIS LEU VAL CYS GLU GLU THR ALA ASN TYR LEU VAL SEQRES 7 B 265 ILE TRP CYS ILE ASP LEU GLU VAL GLU GLU LYS CYS ALA SEQRES 8 B 265 LEU MET GLU GLN VAL ALA HIS GLN THR ILE VAL MET GLN SEQRES 9 B 265 PHE ILE LEU GLU LEU ALA LYS SER LEU LYS VAL ASP PRO SEQRES 10 B 265 ARG ALA CYS PHE ARG GLN PHE PHE THR LYS ILE LYS THR SEQRES 11 B 265 ALA ASP ARG GLN TYR MET GLU GLY PHE ASN ASP GLU LEU SEQRES 12 B 265 GLU ALA PHE LYS GLU ARG VAL ARG GLY ARG ALA LYS LEU SEQRES 13 B 265 ARG ILE GLU LYS ALA MET LYS GLU TYR GLU GLU GLU GLU SEQRES 14 B 265 ARG LYS LYS ARG LEU GLY PRO GLY GLY LEU ASP PRO VAL SEQRES 15 B 265 GLU VAL TYR GLU SER LEU PRO GLU GLU LEU GLN LYS CYS SEQRES 16 B 265 PHE ASP VAL LYS ASP VAL GLN MET LEU GLN ASP ALA ILE SEQRES 17 B 265 SER LYS MET ASP PRO THR ASP ALA LYS TYR HIS MET GLN SEQRES 18 B 265 ARG CYS ILE ASP SER GLY LEU TRP VAL PRO ASN SER LYS SEQRES 19 B 265 ALA SER GLU ALA LYS GLU GLY GLU GLU ALA GLY PRO GLY SEQRES 20 B 265 ASP PRO LEU LEU GLU ALA VAL PRO LYS THR GLY ASP GLU SEQRES 21 B 265 LYS ASP VAL SER VAL FORMUL 3 HOH *176(H2 O) HELIX 1 1 GLN A 9 THR A 22 1 14 HELIX 2 2 GLU A 28 ASP A 52 1 25 HELIX 3 3 PRO A 53 GLU A 59 5 7 HELIX 4 4 PRO A 70 GLN A 72 5 3 HELIX 5 5 THR A 85 THR A 95 1 11 HELIX 6 6 ALA A 97 ALA A 110 1 14 HELIX 7 7 ASP A 113 GLY A 121 5 9 HELIX 8 8 VAL A 122 LEU A 129 5 8 HELIX 9 9 ASP A 179 LEU A 185 5 7 HELIX 10 10 GLU A 186 SER A 198 1 13 HELIX 11 11 HIS B 148 LEU B 165 1 18 HELIX 12 12 ARG B 167 ASP B 177 1 11 HELIX 13 13 ASN B 178 VAL B 182 5 5 HELIX 14 14 CYS B 183 GLU B 200 1 18 HELIX 15 15 LYS B 202 LYS B 227 1 26 HELIX 16 16 ASP B 229 ALA B 232 5 4 HELIX 17 17 CYS B 233 THR B 243 1 11 HELIX 18 18 ASP B 245 LYS B 285 1 41 HELIX 19 19 ASP B 293 LEU B 301 1 9 HELIX 20 20 MET B 316 SER B 322 1 7 HELIX 21 21 THR B 327 SER B 339 1 13 SHEET 1 AA 8 GLU A 4 GLU A 7 0 SHEET 2 AA 8 SER A 155 LEU A 160 -1 O PHE A 156 N PHE A 6 SHEET 3 AA 8 GLN A 145 SER A 150 -1 O ILE A 147 N THR A 159 SHEET 4 AA 8 ALA A 131 LYS A 139 -1 O VAL A 134 N SER A 150 SHEET 5 AA 8 GLY A 170 LEU A 177 -1 O GLY A 170 N LYS A 139 SHEET 6 AA 8 VAL A 74 ASP A 79 -1 O LEU A 75 N LEU A 175 SHEET 7 AA 8 ILE A 64 LYS A 69 -1 O ARG A 65 N ARG A 78 SHEET 8 AA 8 ILE A 205 GLN A 206 1 O GLN A 206 N ILE A 66 CRYST1 83.759 83.759 148.445 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011939 0.006893 0.000000 0.00000 SCALE2 0.000000 0.013786 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006736 0.00000