PDB Short entry for 1VYJ HEADER DNA BINDING PROTEIN 30-APR-04 1VYJ TITLE STRUCTURAL AND BIOCHEMICAL STUDIES OF HUMAN PCNA COMPLEXES PROVIDE THE TITLE 2 BASIS FOR ASSOCIATION WITH CDK/CYCLIN AND RATIONALE FOR INHIBITOR TITLE 3 DESIGN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLIFERATING CELL NUCLEAR ANTIGEN; COMPND 3 CHAIN: A, C, E, G, I, K; COMPND 4 SYNONYM: PCNA, CYCLIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SMALL PEPTIDE SAVLQKKITDYFHPKK; COMPND 8 CHAIN: B, D, F, H, J, L; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PT7; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_VECTOR: PT7 KEYWDS DNA, REPLICATION, PROCESSIVITY, ONCOGENE, DNA-BINDING PROTEIN, DNA KEYWDS 2 REPLICATION, DNA-BINDING SYSTEMIC LUPUS ERYTHEMATOSUS, DNA BINDING KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.KONTOPIDIS,S.WU,D.ZHELEVA,P.TAYLOR,C.MCINNES,D.LANE,P.FISCHER, AUTHOR 2 M.D.WALKINSHAW REVDAT 5 13-DEC-23 1VYJ 1 REMARK REVDAT 4 24-JUL-19 1VYJ 1 REMARK REVDAT 3 24-FEB-09 1VYJ 1 VERSN REVDAT 2 16-FEB-05 1VYJ 1 JRNL REVDAT 1 13-JAN-05 1VYJ 0 JRNL AUTH G.KONTOPIDIS,S.WU,D.ZHELEVA,P.TAYLOR,C.MCINNES,D.LANE, JRNL AUTH 2 P.FISCHER,M.D.WALKINSHAW JRNL TITL STRUCTURAL AND BIOCHEMICAL STUDIES OF HUMAN PROLIFERATING JRNL TITL 2 CELL NUCLEAR ANTIGEN COMPLEXES PROVIDE A RATIONALE FOR JRNL TITL 3 CYCLIN ASSOCIATION AND INHIBITOR DESIGN JRNL REF PROC.NATL.ACAD.SCI.USA V. 102 1871 2005 JRNL REFN ISSN 0027-8424 JRNL PMID 15681588 JRNL DOI 10.1073/PNAS.0406540102 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 60068 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1917 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12712 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.647 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.338 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.250 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.200 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1VYJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-APR-04. REMARK 100 THE DEPOSITION ID IS D_1290015049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-01 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.84560 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62908 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.62000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1AXC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.7M AS, HEPES PH8, PH 8.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 101.93900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 203.87800 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 203.87800 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 101.93900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I, J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 THIS PROTEIN IS AN AUXILIARY PROTEIN OF DNA POLYMERASE DELTA REMARK 400 IS INVOLVED IN THE CONTROL OF EUKARYOTIC DNA REPLICATION REMARK 400 BY INCREASING THE POLYMERASE'S PROCESSIBILITY DURING ELONGATION REMARK 400 OF THE LEADING STRAND. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 258 REMARK 465 GLU A 259 REMARK 465 GLY A 260 REMARK 465 SER A 261 REMARK 465 GLU C 258 REMARK 465 GLU C 259 REMARK 465 GLY C 260 REMARK 465 SER C 261 REMARK 465 GLU E 258 REMARK 465 GLU E 259 REMARK 465 GLY E 260 REMARK 465 SER E 261 REMARK 465 SER G 261 REMARK 465 GLU I 258 REMARK 465 GLU I 259 REMARK 465 GLY I 260 REMARK 465 SER I 261 REMARK 465 GLU K 258 REMARK 465 GLU K 259 REMARK 465 GLY K 260 REMARK 465 SER K 261 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL K 188 OD2 ASP K 189 1.00 REMARK 500 O VAL K 188 CG ASP K 189 1.35 REMARK 500 C VAL K 188 OD2 ASP K 189 1.47 REMARK 500 O GLU C 192 N ALA C 194 1.54 REMARK 500 O HOH I 2048 O HOH I 2049 1.93 REMARK 500 OD2 ASP G 189 OE2 GLU G 192 2.07 REMARK 500 O ASP G 94 N ALA G 96 2.07 REMARK 500 O ASN I 107 OE1 GLU I 109 2.08 REMARK 500 O GLU G 258 N GLY G 260 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS C 77 OE2 GLU G 130 6555 1.42 REMARK 500 OG SER E 42 OD1 ASP G 243 6555 1.94 REMARK 500 CE LYS C 77 OE2 GLU G 130 6555 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ILE G 255 C GLU G 256 N 0.157 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 21 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 ARG A 53 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 GLY A 69 N - CA - C ANGL. DEV. = -15.0 DEGREES REMARK 500 ASP A 165 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 232 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 GLY A 245 O - C - N ANGL. DEV. = -13.6 DEGREES REMARK 500 ASP B 10 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG C 91 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ILE C 180 O - C - N ANGL. DEV. = -18.2 DEGREES REMARK 500 ASP C 232 CB - CG - OD2 ANGL. DEV. = 7.3 DEGREES REMARK 500 LEU E 16 CA - CB - CG ANGL. DEV. = -19.4 DEGREES REMARK 500 ASP E 97 CA - C - N ANGL. DEV. = -15.2 DEGREES REMARK 500 ASP E 97 O - C - N ANGL. DEV. = 13.3 DEGREES REMARK 500 ASP E 122 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP E 156 O - C - N ANGL. DEV. = -10.9 DEGREES REMARK 500 ASP E 232 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP F 10 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP G 21 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP G 86 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 CYS G 135 CB - CA - C ANGL. DEV. = 7.4 DEGREES REMARK 500 ASP G 232 CB - CG - OD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 LEU I 16 CA - CB - CG ANGL. DEV. = -15.6 DEGREES REMARK 500 ASP I 21 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP I 29 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG I 53 NE - CZ - NH1 ANGL. DEV. = -3.8 DEGREES REMARK 500 ASP I 94 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP I 122 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP I 165 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 GLU I 192 CA - C - N ANGL. DEV. = -18.4 DEGREES REMARK 500 GLU I 192 O - C - N ANGL. DEV. = 16.8 DEGREES REMARK 500 ASP K 97 CB - CG - OD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 GLY K 127 C - N - CA ANGL. DEV. = -15.5 DEGREES REMARK 500 ASP K 150 CB - CG - OD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 ASP K 156 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP K 243 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 8 78.80 -112.35 REMARK 500 ARG A 61 114.92 -176.93 REMARK 500 GLU A 93 -176.62 -63.52 REMARK 500 ASN A 95 -69.94 -95.10 REMARK 500 ALA A 96 117.52 25.99 REMARK 500 ASP A 97 32.61 -86.59 REMARK 500 LEU A 121 -84.62 -107.11 REMARK 500 ASP A 122 70.68 71.65 REMARK 500 GLU A 124 98.19 100.38 REMARK 500 VAL A 188 -167.02 26.78 REMARK 500 ASP A 189 -29.66 85.92 REMARK 500 LYS A 190 42.68 -177.30 REMARK 500 GLU A 193 54.21 -97.17 REMARK 500 ALA A 242 117.66 -27.93 REMARK 500 ASP A 243 -1.60 81.27 REMARK 500 ALA B 2 -20.30 172.62 REMARK 500 VAL B 3 -163.25 -161.95 REMARK 500 ASP B 10 3.66 -66.88 REMARK 500 TYR B 11 -31.73 -137.04 REMARK 500 PRO B 14 149.34 -37.11 REMARK 500 ASN C 24 -91.58 -27.87 REMARK 500 ASN C 95 58.27 -115.18 REMARK 500 ASN C 107 -1.16 -48.45 REMARK 500 GLN C 108 -150.66 13.60 REMARK 500 GLU C 109 -52.80 91.52 REMARK 500 LYS C 164 -39.88 -37.18 REMARK 500 ASN C 179 89.58 -150.53 REMARK 500 GLN C 184 97.50 -47.91 REMARK 500 THR C 185 -146.44 11.29 REMARK 500 SER C 186 -56.74 -178.55 REMARK 500 ASN C 187 -162.91 -77.34 REMARK 500 LYS C 190 -150.98 75.54 REMARK 500 GLU C 191 -166.70 75.49 REMARK 500 GLU C 192 -133.09 -73.28 REMARK 500 GLU C 193 -11.06 27.31 REMARK 500 MET C 244 -41.85 -137.35 REMARK 500 ALA D 2 153.34 110.48 REMARK 500 VAL D 3 -46.54 -169.79 REMARK 500 TYR D 11 -37.70 -136.19 REMARK 500 ASP E 41 -179.33 -66.66 REMARK 500 HIS E 44 45.20 -108.51 REMARK 500 ASN E 65 141.24 -31.58 REMARK 500 GLU E 93 -162.32 -69.65 REMARK 500 ASN E 95 -74.50 -106.88 REMARK 500 ALA E 96 124.38 34.09 REMARK 500 PRO E 106 -84.55 -69.07 REMARK 500 GLN E 108 -179.19 162.80 REMARK 500 SER E 186 -50.95 -121.52 REMARK 500 ASN E 187 -113.26 29.31 REMARK 500 ASP E 189 77.14 100.59 REMARK 500 REMARK 500 THIS ENTRY HAS 121 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN C 107 GLN C 108 -121.67 REMARK 500 ASP E 156 ALA E 157 147.69 REMARK 500 THR I 185 SER I 186 -143.83 REMARK 500 GLU I 192 GLU I 193 139.56 REMARK 500 ALA K 194 VAL K 195 145.39 REMARK 500 ILE K 241 ALA K 242 -140.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 PHE G 2 0.08 SIDE CHAIN REMARK 500 TYR K 133 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ILE C 180 -29.00 REMARK 500 GLU C 193 -10.85 REMARK 500 THR E 98 13.46 REMARK 500 LYS E 110 12.54 REMARK 500 ASP E 156 -13.44 REMARK 500 VAL K 195 16.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AXC RELATED DB: PDB REMARK 900 HUMAN PCNA REMARK 900 RELATED ID: 1U76 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HPCNA BOUND TO RESIDUES 452-466 OF THEDNA REMARK 900 POLYMERASE-DELTA-P66 SUBUNIT REMARK 900 RELATED ID: 1U7B RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HPCNA BOUND TO RESIDUES 331-350 OF THEFLAP REMARK 900 ENDONUCLEASE-1 (FEN1) REMARK 900 RELATED ID: 1VYM RELATED DB: PDB REMARK 900 NATIVE HUMAN PCNA REMARK 900 RELATED ID: 1W60 RELATED DB: PDB REMARK 900 NATIVE HUMAN PCNA DBREF 1VYJ A 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 1VYJ C 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 1VYJ E 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 1VYJ G 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 1VYJ I 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 1VYJ K 1 261 UNP P12004 PCNA_HUMAN 1 261 DBREF 1VYJ B 1 16 PDB 1VYJ 1VYJ 1 16 DBREF 1VYJ D 1 16 PDB 1VYJ 1VYJ 1 16 DBREF 1VYJ F 1 16 PDB 1VYJ 1VYJ 1 16 DBREF 1VYJ H 1 16 PDB 1VYJ 1VYJ 1 16 DBREF 1VYJ J 1 16 PDB 1VYJ 1VYJ 1 16 DBREF 1VYJ L 1 16 PDB 1VYJ 1VYJ 1 16 SEQRES 1 A 261 MET PHE GLU ALA ARG LEU VAL GLN GLY SER ILE LEU LYS SEQRES 2 A 261 LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE ASN GLU ALA SEQRES 3 A 261 CYS TRP ASP ILE SER SER SER GLY VAL ASN LEU GLN SER SEQRES 4 A 261 MET ASP SER SER HIS VAL SER LEU VAL GLN LEU THR LEU SEQRES 5 A 261 ARG SER GLU GLY PHE ASP THR TYR ARG CYS ASP ARG ASN SEQRES 6 A 261 LEU ALA MET GLY VAL ASN LEU THR SER MET SER LYS ILE SEQRES 7 A 261 LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE THR LEU ARG SEQRES 8 A 261 ALA GLU ASP ASN ALA ASP THR LEU ALA LEU VAL PHE GLU SEQRES 9 A 261 ALA PRO ASN GLN GLU LYS VAL SER ASP TYR GLU MET LYS SEQRES 10 A 261 LEU MET ASP LEU ASP VAL GLU GLN LEU GLY ILE PRO GLU SEQRES 11 A 261 GLN GLU TYR SER CYS VAL VAL LYS MET PRO SER GLY GLU SEQRES 12 A 261 PHE ALA ARG ILE CYS ARG ASP LEU SER HIS ILE GLY ASP SEQRES 13 A 261 ALA VAL VAL ILE SER CYS ALA LYS ASP GLY VAL LYS PHE SEQRES 14 A 261 SER ALA SER GLY GLU LEU GLY ASN GLY ASN ILE LYS LEU SEQRES 15 A 261 SER GLN THR SER ASN VAL ASP LYS GLU GLU GLU ALA VAL SEQRES 16 A 261 THR ILE GLU MET ASN GLU PRO VAL GLN LEU THR PHE ALA SEQRES 17 A 261 LEU ARG TYR LEU ASN PHE PHE THR LYS ALA THR PRO LEU SEQRES 18 A 261 SER SER THR VAL THR LEU SER MET SER ALA ASP VAL PRO SEQRES 19 A 261 LEU VAL VAL GLU TYR LYS ILE ALA ASP MET GLY HIS LEU SEQRES 20 A 261 LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP GLU GLU GLY SEQRES 21 A 261 SER SEQRES 1 B 16 SER ALA VAL LEU GLN LYS LYS ILE THR ASP TYR PHE HIS SEQRES 2 B 16 PRO LYS LYS SEQRES 1 C 261 MET PHE GLU ALA ARG LEU VAL GLN GLY SER ILE LEU LYS SEQRES 2 C 261 LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE ASN GLU ALA SEQRES 3 C 261 CYS TRP ASP ILE SER SER SER GLY VAL ASN LEU GLN SER SEQRES 4 C 261 MET ASP SER SER HIS VAL SER LEU VAL GLN LEU THR LEU SEQRES 5 C 261 ARG SER GLU GLY PHE ASP THR TYR ARG CYS ASP ARG ASN SEQRES 6 C 261 LEU ALA MET GLY VAL ASN LEU THR SER MET SER LYS ILE SEQRES 7 C 261 LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE THR LEU ARG SEQRES 8 C 261 ALA GLU ASP ASN ALA ASP THR LEU ALA LEU VAL PHE GLU SEQRES 9 C 261 ALA PRO ASN GLN GLU LYS VAL SER ASP TYR GLU MET LYS SEQRES 10 C 261 LEU MET ASP LEU ASP VAL GLU GLN LEU GLY ILE PRO GLU SEQRES 11 C 261 GLN GLU TYR SER CYS VAL VAL LYS MET PRO SER GLY GLU SEQRES 12 C 261 PHE ALA ARG ILE CYS ARG ASP LEU SER HIS ILE GLY ASP SEQRES 13 C 261 ALA VAL VAL ILE SER CYS ALA LYS ASP GLY VAL LYS PHE SEQRES 14 C 261 SER ALA SER GLY GLU LEU GLY ASN GLY ASN ILE LYS LEU SEQRES 15 C 261 SER GLN THR SER ASN VAL ASP LYS GLU GLU GLU ALA VAL SEQRES 16 C 261 THR ILE GLU MET ASN GLU PRO VAL GLN LEU THR PHE ALA SEQRES 17 C 261 LEU ARG TYR LEU ASN PHE PHE THR LYS ALA THR PRO LEU SEQRES 18 C 261 SER SER THR VAL THR LEU SER MET SER ALA ASP VAL PRO SEQRES 19 C 261 LEU VAL VAL GLU TYR LYS ILE ALA ASP MET GLY HIS LEU SEQRES 20 C 261 LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP GLU GLU GLY SEQRES 21 C 261 SER SEQRES 1 D 16 SER ALA VAL LEU GLN LYS LYS ILE THR ASP TYR PHE HIS SEQRES 2 D 16 PRO LYS LYS SEQRES 1 E 261 MET PHE GLU ALA ARG LEU VAL GLN GLY SER ILE LEU LYS SEQRES 2 E 261 LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE ASN GLU ALA SEQRES 3 E 261 CYS TRP ASP ILE SER SER SER GLY VAL ASN LEU GLN SER SEQRES 4 E 261 MET ASP SER SER HIS VAL SER LEU VAL GLN LEU THR LEU SEQRES 5 E 261 ARG SER GLU GLY PHE ASP THR TYR ARG CYS ASP ARG ASN SEQRES 6 E 261 LEU ALA MET GLY VAL ASN LEU THR SER MET SER LYS ILE SEQRES 7 E 261 LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE THR LEU ARG SEQRES 8 E 261 ALA GLU ASP ASN ALA ASP THR LEU ALA LEU VAL PHE GLU SEQRES 9 E 261 ALA PRO ASN GLN GLU LYS VAL SER ASP TYR GLU MET LYS SEQRES 10 E 261 LEU MET ASP LEU ASP VAL GLU GLN LEU GLY ILE PRO GLU SEQRES 11 E 261 GLN GLU TYR SER CYS VAL VAL LYS MET PRO SER GLY GLU SEQRES 12 E 261 PHE ALA ARG ILE CYS ARG ASP LEU SER HIS ILE GLY ASP SEQRES 13 E 261 ALA VAL VAL ILE SER CYS ALA LYS ASP GLY VAL LYS PHE SEQRES 14 E 261 SER ALA SER GLY GLU LEU GLY ASN GLY ASN ILE LYS LEU SEQRES 15 E 261 SER GLN THR SER ASN VAL ASP LYS GLU GLU GLU ALA VAL SEQRES 16 E 261 THR ILE GLU MET ASN GLU PRO VAL GLN LEU THR PHE ALA SEQRES 17 E 261 LEU ARG TYR LEU ASN PHE PHE THR LYS ALA THR PRO LEU SEQRES 18 E 261 SER SER THR VAL THR LEU SER MET SER ALA ASP VAL PRO SEQRES 19 E 261 LEU VAL VAL GLU TYR LYS ILE ALA ASP MET GLY HIS LEU SEQRES 20 E 261 LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP GLU GLU GLY SEQRES 21 E 261 SER SEQRES 1 F 16 SER ALA VAL LEU GLN LYS LYS ILE THR ASP TYR PHE HIS SEQRES 2 F 16 PRO LYS LYS SEQRES 1 G 261 MET PHE GLU ALA ARG LEU VAL GLN GLY SER ILE LEU LYS SEQRES 2 G 261 LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE ASN GLU ALA SEQRES 3 G 261 CYS TRP ASP ILE SER SER SER GLY VAL ASN LEU GLN SER SEQRES 4 G 261 MET ASP SER SER HIS VAL SER LEU VAL GLN LEU THR LEU SEQRES 5 G 261 ARG SER GLU GLY PHE ASP THR TYR ARG CYS ASP ARG ASN SEQRES 6 G 261 LEU ALA MET GLY VAL ASN LEU THR SER MET SER LYS ILE SEQRES 7 G 261 LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE THR LEU ARG SEQRES 8 G 261 ALA GLU ASP ASN ALA ASP THR LEU ALA LEU VAL PHE GLU SEQRES 9 G 261 ALA PRO ASN GLN GLU LYS VAL SER ASP TYR GLU MET LYS SEQRES 10 G 261 LEU MET ASP LEU ASP VAL GLU GLN LEU GLY ILE PRO GLU SEQRES 11 G 261 GLN GLU TYR SER CYS VAL VAL LYS MET PRO SER GLY GLU SEQRES 12 G 261 PHE ALA ARG ILE CYS ARG ASP LEU SER HIS ILE GLY ASP SEQRES 13 G 261 ALA VAL VAL ILE SER CYS ALA LYS ASP GLY VAL LYS PHE SEQRES 14 G 261 SER ALA SER GLY GLU LEU GLY ASN GLY ASN ILE LYS LEU SEQRES 15 G 261 SER GLN THR SER ASN VAL ASP LYS GLU GLU GLU ALA VAL SEQRES 16 G 261 THR ILE GLU MET ASN GLU PRO VAL GLN LEU THR PHE ALA SEQRES 17 G 261 LEU ARG TYR LEU ASN PHE PHE THR LYS ALA THR PRO LEU SEQRES 18 G 261 SER SER THR VAL THR LEU SER MET SER ALA ASP VAL PRO SEQRES 19 G 261 LEU VAL VAL GLU TYR LYS ILE ALA ASP MET GLY HIS LEU SEQRES 20 G 261 LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP GLU GLU GLY SEQRES 21 G 261 SER SEQRES 1 H 16 SER ALA VAL LEU GLN LYS LYS ILE THR ASP TYR PHE HIS SEQRES 2 H 16 PRO LYS LYS SEQRES 1 I 261 MET PHE GLU ALA ARG LEU VAL GLN GLY SER ILE LEU LYS SEQRES 2 I 261 LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE ASN GLU ALA SEQRES 3 I 261 CYS TRP ASP ILE SER SER SER GLY VAL ASN LEU GLN SER SEQRES 4 I 261 MET ASP SER SER HIS VAL SER LEU VAL GLN LEU THR LEU SEQRES 5 I 261 ARG SER GLU GLY PHE ASP THR TYR ARG CYS ASP ARG ASN SEQRES 6 I 261 LEU ALA MET GLY VAL ASN LEU THR SER MET SER LYS ILE SEQRES 7 I 261 LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE THR LEU ARG SEQRES 8 I 261 ALA GLU ASP ASN ALA ASP THR LEU ALA LEU VAL PHE GLU SEQRES 9 I 261 ALA PRO ASN GLN GLU LYS VAL SER ASP TYR GLU MET LYS SEQRES 10 I 261 LEU MET ASP LEU ASP VAL GLU GLN LEU GLY ILE PRO GLU SEQRES 11 I 261 GLN GLU TYR SER CYS VAL VAL LYS MET PRO SER GLY GLU SEQRES 12 I 261 PHE ALA ARG ILE CYS ARG ASP LEU SER HIS ILE GLY ASP SEQRES 13 I 261 ALA VAL VAL ILE SER CYS ALA LYS ASP GLY VAL LYS PHE SEQRES 14 I 261 SER ALA SER GLY GLU LEU GLY ASN GLY ASN ILE LYS LEU SEQRES 15 I 261 SER GLN THR SER ASN VAL ASP LYS GLU GLU GLU ALA VAL SEQRES 16 I 261 THR ILE GLU MET ASN GLU PRO VAL GLN LEU THR PHE ALA SEQRES 17 I 261 LEU ARG TYR LEU ASN PHE PHE THR LYS ALA THR PRO LEU SEQRES 18 I 261 SER SER THR VAL THR LEU SER MET SER ALA ASP VAL PRO SEQRES 19 I 261 LEU VAL VAL GLU TYR LYS ILE ALA ASP MET GLY HIS LEU SEQRES 20 I 261 LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP GLU GLU GLY SEQRES 21 I 261 SER SEQRES 1 J 16 SER ALA VAL LEU GLN LYS LYS ILE THR ASP TYR PHE HIS SEQRES 2 J 16 PRO LYS LYS SEQRES 1 K 261 MET PHE GLU ALA ARG LEU VAL GLN GLY SER ILE LEU LYS SEQRES 2 K 261 LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE ASN GLU ALA SEQRES 3 K 261 CYS TRP ASP ILE SER SER SER GLY VAL ASN LEU GLN SER SEQRES 4 K 261 MET ASP SER SER HIS VAL SER LEU VAL GLN LEU THR LEU SEQRES 5 K 261 ARG SER GLU GLY PHE ASP THR TYR ARG CYS ASP ARG ASN SEQRES 6 K 261 LEU ALA MET GLY VAL ASN LEU THR SER MET SER LYS ILE SEQRES 7 K 261 LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE THR LEU ARG SEQRES 8 K 261 ALA GLU ASP ASN ALA ASP THR LEU ALA LEU VAL PHE GLU SEQRES 9 K 261 ALA PRO ASN GLN GLU LYS VAL SER ASP TYR GLU MET LYS SEQRES 10 K 261 LEU MET ASP LEU ASP VAL GLU GLN LEU GLY ILE PRO GLU SEQRES 11 K 261 GLN GLU TYR SER CYS VAL VAL LYS MET PRO SER GLY GLU SEQRES 12 K 261 PHE ALA ARG ILE CYS ARG ASP LEU SER HIS ILE GLY ASP SEQRES 13 K 261 ALA VAL VAL ILE SER CYS ALA LYS ASP GLY VAL LYS PHE SEQRES 14 K 261 SER ALA SER GLY GLU LEU GLY ASN GLY ASN ILE LYS LEU SEQRES 15 K 261 SER GLN THR SER ASN VAL ASP LYS GLU GLU GLU ALA VAL SEQRES 16 K 261 THR ILE GLU MET ASN GLU PRO VAL GLN LEU THR PHE ALA SEQRES 17 K 261 LEU ARG TYR LEU ASN PHE PHE THR LYS ALA THR PRO LEU SEQRES 18 K 261 SER SER THR VAL THR LEU SER MET SER ALA ASP VAL PRO SEQRES 19 K 261 LEU VAL VAL GLU TYR LYS ILE ALA ASP MET GLY HIS LEU SEQRES 20 K 261 LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP GLU GLU GLY SEQRES 21 K 261 SER SEQRES 1 L 16 SER ALA VAL LEU GLN LYS LYS ILE THR ASP TYR PHE HIS SEQRES 2 L 16 PRO LYS LYS FORMUL 13 HOH *320(H2 O) HELIX 1 1 GLY A 9 LYS A 20 1 12 HELIX 2 2 GLU A 55 PHE A 57 5 3 HELIX 3 3 LEU A 72 LYS A 80 1 9 HELIX 4 4 SER A 141 GLY A 155 1 15 HELIX 5 5 LEU A 209 THR A 216 1 8 HELIX 6 6 LYS A 217 SER A 222 5 6 HELIX 7 7 LYS B 7 TYR B 11 5 5 HELIX 8 8 GLY C 9 LYS C 20 1 12 HELIX 9 9 GLU C 55 PHE C 57 5 3 HELIX 10 10 LEU C 72 LYS C 80 1 9 HELIX 11 11 SER C 141 SER C 152 1 12 HELIX 12 12 LEU C 209 THR C 216 1 8 HELIX 13 13 LYS C 217 SER C 222 5 6 HELIX 14 14 LYS D 7 TYR D 11 5 5 HELIX 15 15 GLY E 9 ASP E 21 1 13 HELIX 16 16 GLU E 55 PHE E 57 5 3 HELIX 17 17 LEU E 72 LYS E 80 1 9 HELIX 18 18 SER E 141 HIS E 153 1 13 HELIX 19 19 LEU E 209 THR E 216 1 8 HELIX 20 20 LYS E 217 SER E 222 5 6 HELIX 21 21 LYS F 7 TYR F 11 5 5 HELIX 22 22 GLN G 8 ALA G 18 1 11 HELIX 23 23 GLU G 55 PHE G 57 5 3 HELIX 24 24 LEU G 72 LYS G 80 1 9 HELIX 25 25 SER G 141 HIS G 153 1 13 HELIX 26 26 LEU G 209 THR G 216 1 8 HELIX 27 27 LYS G 217 SER G 222 5 6 HELIX 28 28 LYS H 7 TYR H 11 5 5 HELIX 29 29 GLY I 9 ALA I 18 1 10 HELIX 30 30 GLU I 55 PHE I 57 5 3 HELIX 31 31 LEU I 72 CYS I 81 1 10 HELIX 32 32 SER I 141 HIS I 153 1 13 HELIX 33 33 LEU I 209 THR I 216 1 8 HELIX 34 34 LYS I 217 SER I 222 5 6 HELIX 35 35 LYS J 7 TYR J 11 5 5 HELIX 36 36 GLY K 9 LYS K 20 1 12 HELIX 37 37 GLU K 55 PHE K 57 5 3 HELIX 38 38 LEU K 72 LYS K 80 1 9 HELIX 39 39 SER K 141 HIS K 153 1 13 HELIX 40 40 LEU K 209 THR K 216 1 8 HELIX 41 41 LYS K 217 SER K 222 5 6 HELIX 42 42 LYS L 7 TYR L 11 5 5 SHEET 1 AA 8 PHE A 2 LEU A 6 0 SHEET 2 AA 8 ILE A 87 ALA A 92 -1 O ILE A 88 N LEU A 6 SHEET 3 AA 8 THR A 98 GLU A 104 -1 O ALA A 100 N ARG A 91 SHEET 4 AA 8 LYS A 110 LYS A 117 -1 O SER A 112 N PHE A 103 SHEET 5 AA 8 GLY C 176 SER C 183 -1 O ASN C 177 N GLU A 115 SHEET 6 AA 8 GLY C 166 SER C 172 -1 O VAL C 167 N LEU C 182 SHEET 7 AA 8 ALA C 157 CYS C 162 -1 O VAL C 159 N SER C 170 SHEET 8 AA 8 VAL C 203 ALA C 208 -1 O VAL C 203 N CYS C 162 SHEET 1 AB 9 LEU A 66 ASN A 71 0 SHEET 2 AB 9 GLU A 25 SER A 31 -1 O ALA A 26 N VAL A 70 SHEET 3 AB 9 GLY A 34 MET A 40 -1 O GLY A 34 N SER A 31 SHEET 4 AB 9 SER A 46 ARG A 53 -1 O VAL A 48 N SER A 39 SHEET 5 AB 9 GLY A 245 LEU A 251 -1 O HIS A 246 N THR A 51 SHEET 6 AB 9 LEU A 235 ILE A 241 -1 O LEU A 235 N LEU A 251 SHEET 7 AB 9 THR A 224 MET A 229 -1 O THR A 226 N GLU A 238 SHEET 8 AB 9 CYS A 135 PRO A 140 -1 O CYS A 135 N MET A 229 SHEET 9 AB 9 THR A 196 MET A 199 -1 O THR A 196 N LYS A 138 SHEET 1 AC 2 LEU A 126 GLY A 127 0 SHEET 2 AC 2 HIS B 13 PRO B 14 -1 O HIS B 13 N GLY A 127 SHEET 1 AD 9 VAL A 203 ALA A 208 0 SHEET 2 AD 9 ALA A 157 CYS A 162 -1 O VAL A 158 N PHE A 207 SHEET 3 AD 9 GLY A 166 GLY A 173 -1 O LYS A 168 N SER A 161 SHEET 4 AD 9 GLY A 176 SER A 183 -1 O GLY A 176 N GLY A 173 SHEET 5 AD 9 VAL E 111 LYS E 117 -1 O VAL E 111 N LYS A 181 SHEET 6 AD 9 THR E 98 GLU E 104 -1 O LEU E 99 N MET E 116 SHEET 7 AD 9 ILE E 87 ALA E 92 -1 O ILE E 87 N GLU E 104 SHEET 8 AD 9 PHE E 2 LEU E 6 -1 O PHE E 2 N ALA E 92 SHEET 9 AD 9 THR E 59 CYS E 62 -1 O THR E 59 N ARG E 5 SHEET 1 AE 2 LYS A 254 ILE A 255 0 SHEET 2 AE 2 LEU B 4 GLN B 5 -1 O LEU B 4 N ILE A 255 SHEET 1 CA 9 THR C 59 CYS C 62 0 SHEET 2 CA 9 PHE C 2 LEU C 6 -1 O GLU C 3 N ARG C 61 SHEET 3 CA 9 ILE C 87 ALA C 92 -1 O ILE C 88 N LEU C 6 SHEET 4 CA 9 THR C 98 GLU C 104 -1 O ALA C 100 N ARG C 91 SHEET 5 CA 9 LYS C 110 LYS C 117 -1 O SER C 112 N PHE C 103 SHEET 6 CA 9 GLY E 176 SER E 183 -1 O ASN E 177 N GLU C 115 SHEET 7 CA 9 GLY E 166 SER E 172 -1 O VAL E 167 N LEU E 182 SHEET 8 CA 9 ALA E 157 CYS E 162 -1 O VAL E 159 N SER E 170 SHEET 9 CA 9 VAL E 203 ALA E 208 -1 O VAL E 203 N CYS E 162 SHEET 1 CB 9 LEU C 66 ASN C 71 0 SHEET 2 CB 9 GLU C 25 ILE C 30 -1 O ALA C 26 N VAL C 70 SHEET 3 CB 9 GLY C 34 MET C 40 -1 O ASN C 36 N ASP C 29 SHEET 4 CB 9 SER C 46 ARG C 53 -1 O VAL C 48 N SER C 39 SHEET 5 CB 9 GLY C 245 LEU C 251 -1 O HIS C 246 N THR C 51 SHEET 6 CB 9 LEU C 235 ILE C 241 -1 O LEU C 235 N LEU C 251 SHEET 7 CB 9 THR C 224 MET C 229 -1 O THR C 226 N GLU C 238 SHEET 8 CB 9 CYS C 135 PRO C 140 -1 O CYS C 135 N MET C 229 SHEET 9 CB 9 THR C 196 MET C 199 -1 O THR C 196 N LYS C 138 SHEET 1 CC 2 LEU C 126 GLY C 127 0 SHEET 2 CC 2 HIS D 13 PRO D 14 -1 O HIS D 13 N GLY C 127 SHEET 1 CD 2 LYS C 254 ILE C 255 0 SHEET 2 CD 2 LEU D 4 GLN D 5 -1 O LEU D 4 N ILE C 255 SHEET 1 EA 9 LEU E 66 ASN E 71 0 SHEET 2 EA 9 GLU E 25 SER E 31 -1 O ALA E 26 N VAL E 70 SHEET 3 EA 9 GLY E 34 MET E 40 -1 O GLY E 34 N SER E 31 SHEET 4 EA 9 SER E 46 ARG E 53 -1 O VAL E 48 N SER E 39 SHEET 5 EA 9 GLY E 245 LEU E 251 -1 O HIS E 246 N THR E 51 SHEET 6 EA 9 LEU E 235 ILE E 241 -1 O LEU E 235 N LEU E 251 SHEET 7 EA 9 THR E 224 MET E 229 -1 O THR E 226 N GLU E 238 SHEET 8 EA 9 CYS E 135 PRO E 140 -1 O CYS E 135 N MET E 229 SHEET 9 EA 9 THR E 196 MET E 199 -1 O THR E 196 N LYS E 138 SHEET 1 EB 2 LYS E 254 ILE E 255 0 SHEET 2 EB 2 LEU F 4 GLN F 5 -1 O LEU F 4 N ILE E 255 SHEET 1 GA 8 PHE G 2 LEU G 6 0 SHEET 2 GA 8 ILE G 87 ALA G 92 -1 O ILE G 88 N LEU G 6 SHEET 3 GA 8 THR G 98 GLU G 104 -1 O ALA G 100 N ARG G 91 SHEET 4 GA 8 LYS G 110 LYS G 117 -1 O SER G 112 N PHE G 103 SHEET 5 GA 8 GLY I 176 SER I 183 -1 O ASN I 177 N GLU G 115 SHEET 6 GA 8 GLY I 166 GLY I 173 -1 O VAL I 167 N LEU I 182 SHEET 7 GA 8 ALA I 157 ALA I 163 -1 O VAL I 159 N SER I 170 SHEET 8 GA 8 VAL I 203 ALA I 208 -1 O VAL I 203 N CYS I 162 SHEET 1 GB 9 LEU G 66 ASN G 71 0 SHEET 2 GB 9 GLU G 25 SER G 31 -1 O ALA G 26 N VAL G 70 SHEET 3 GB 9 GLY G 34 MET G 40 -1 O GLY G 34 N SER G 31 SHEET 4 GB 9 SER G 46 ARG G 53 -1 O VAL G 48 N SER G 39 SHEET 5 GB 9 GLY G 245 LEU G 251 -1 O HIS G 246 N THR G 51 SHEET 6 GB 9 LEU G 235 ILE G 241 -1 O LEU G 235 N LEU G 251 SHEET 7 GB 9 THR G 224 MET G 229 -1 O THR G 226 N GLU G 238 SHEET 8 GB 9 CYS G 135 PRO G 140 -1 O CYS G 135 N MET G 229 SHEET 9 GB 9 THR G 196 MET G 199 -1 O THR G 196 N LYS G 138 SHEET 1 GC 2 LEU G 126 GLY G 127 0 SHEET 2 GC 2 HIS H 13 PRO H 14 -1 O HIS H 13 N GLY G 127 SHEET 1 GD 9 VAL G 203 ALA G 208 0 SHEET 2 GD 9 ALA G 157 CYS G 162 -1 O VAL G 158 N PHE G 207 SHEET 3 GD 9 GLY G 166 SER G 172 -1 O LYS G 168 N SER G 161 SHEET 4 GD 9 GLY G 176 SER G 183 -1 O GLY G 178 N ALA G 171 SHEET 5 GD 9 LYS K 110 LEU K 118 -1 O VAL K 111 N LYS G 181 SHEET 6 GD 9 ASP K 97 GLU K 104 -1 O ASP K 97 N LEU K 118 SHEET 7 GD 9 ILE K 87 ALA K 92 -1 O ILE K 87 N GLU K 104 SHEET 8 GD 9 PHE K 2 LEU K 6 -1 O PHE K 2 N ALA K 92 SHEET 9 GD 9 THR K 59 CYS K 62 -1 O THR K 59 N ARG K 5 SHEET 1 GE 2 LYS G 254 ILE G 255 0 SHEET 2 GE 2 LEU H 4 GLN H 5 -1 O LEU H 4 N ILE G 255 SHEET 1 IA 9 THR I 59 CYS I 62 0 SHEET 2 IA 9 PHE I 2 LEU I 6 -1 O GLU I 3 N ARG I 61 SHEET 3 IA 9 ILE I 87 ALA I 92 -1 O ILE I 88 N LEU I 6 SHEET 4 IA 9 THR I 98 GLU I 104 -1 O ALA I 100 N ARG I 91 SHEET 5 IA 9 VAL I 111 LYS I 117 -1 O SER I 112 N PHE I 103 SHEET 6 IA 9 GLY K 176 SER K 183 -1 O ASN K 177 N GLU I 115 SHEET 7 IA 9 GLY K 166 GLY K 173 -1 O VAL K 167 N LEU K 182 SHEET 8 IA 9 ALA K 157 CYS K 162 -1 O ALA K 157 N SER K 172 SHEET 9 IA 9 VAL K 203 ALA K 208 -1 O VAL K 203 N CYS K 162 SHEET 1 IB 9 LEU I 66 ASN I 71 0 SHEET 2 IB 9 GLU I 25 ILE I 30 -1 O ALA I 26 N VAL I 70 SHEET 3 IB 9 GLY I 34 MET I 40 -1 O ASN I 36 N ASP I 29 SHEET 4 IB 9 SER I 46 ARG I 53 -1 O VAL I 48 N SER I 39 SHEET 5 IB 9 GLY I 245 LEU I 251 -1 O HIS I 246 N THR I 51 SHEET 6 IB 9 LEU I 235 LYS I 240 -1 O LEU I 235 N LEU I 251 SHEET 7 IB 9 THR I 224 MET I 229 -1 O THR I 226 N GLU I 238 SHEET 8 IB 9 CYS I 135 PRO I 140 -1 O CYS I 135 N MET I 229 SHEET 9 IB 9 THR I 196 MET I 199 -1 O THR I 196 N LYS I 138 SHEET 1 IC 2 LEU I 126 GLY I 127 0 SHEET 2 IC 2 HIS J 13 PRO J 14 -1 O HIS J 13 N GLY I 127 SHEET 1 KA 8 LEU K 66 ASN K 71 0 SHEET 2 KA 8 GLU K 25 SER K 31 -1 O ALA K 26 N VAL K 70 SHEET 3 KA 8 GLY K 34 MET K 40 -1 O GLY K 34 N SER K 31 SHEET 4 KA 8 SER K 46 ARG K 53 -1 O VAL K 48 N SER K 39 SHEET 5 KA 8 GLY K 245 LEU K 251 -1 O HIS K 246 N THR K 51 SHEET 6 KA 8 VAL K 233 ILE K 241 -1 O LEU K 235 N LEU K 251 SHEET 7 KA 8 THR K 224 SER K 230 -1 O THR K 226 N GLU K 238 SHEET 8 KA 8 VAL K 136 PRO K 140 -1 O VAL K 137 N LEU K 227 SHEET 1 KB 2 LEU K 126 GLY K 127 0 SHEET 2 KB 2 HIS L 13 PRO L 14 -1 O HIS L 13 N GLY K 127 SHEET 1 KC 2 LYS K 254 ILE K 255 0 SHEET 2 KC 2 LEU L 4 GLN L 5 -1 O LEU L 4 N ILE K 255 SSBOND 1 CYS A 135 CYS A 162 1555 1555 2.98 SSBOND 2 CYS C 135 CYS C 162 1555 1555 2.10 SSBOND 3 CYS E 135 CYS E 162 1555 1555 2.02 SSBOND 4 CYS G 135 CYS G 162 1555 1555 2.03 SSBOND 5 CYS I 135 CYS I 162 1555 1555 2.02 SSBOND 6 CYS K 135 CYS K 162 1555 1555 2.02 CRYST1 119.101 119.101 305.817 90.00 90.00 120.00 P 31 2 1 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008400 0.004850 0.000000 0.00000 SCALE2 0.000000 0.009700 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003270 0.00000