PDB Short entry for 1WXO
HEADER    HYDROLASE                               27-JAN-05   1WXO              
TITLE     STRUCTURE OF ARCHAEAL TRANS-EDITING PROTEIN ALAX IN COMPLEX WITH ZINC 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: ALANYL-TRNA SYNTHETASE;                                    
COMPND   3 CHAIN: A, B, C;                                                      
COMPND   4 SYNONYM: TRANS-EDITING PROTEIN ALAX;                                 
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII;                          
SOURCE   3 ORGANISM_TAXID: 70601;                                               
SOURCE   4 STRAIN: OT3;                                                         
SOURCE   5 GENE: PH0574;                                                        
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS-(DE3)-RIL-X;                
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET26B                                    
KEYWDS    HYDROLASE, TRANS-EDITING                                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    M.SOKABE,A.OKADA,T.NAKASHIMA,M.YAO,I.TANAKA                           
REVDAT   5   25-OCT-23 1WXO    1       REMARK LINK                              
REVDAT   4   13-JUL-11 1WXO    1       VERSN                                    
REVDAT   3   24-FEB-09 1WXO    1       VERSN                                    
REVDAT   2   24-JAN-06 1WXO    1       JRNL                                     
REVDAT   1   26-JUL-05 1WXO    0                                                
JRNL        AUTH   M.SOKABE,A.OKADA,M.YAO,T.NAKASHIMA,I.TANAKA                  
JRNL        TITL   MOLECULAR BASIS OF ALANINE DISCRIMINATION IN EDITING SITE    
JRNL        REF    PROC.NATL.ACAD.SCI.USA        V. 102 11669 2005              
JRNL        REFN                   ISSN 0027-8424                               
JRNL        PMID   16087889                                                     
JRNL        DOI    10.1073/PNAS.0502119102                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.88 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS                                                  
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : ENGH & HUBER                                    
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 50.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 99.8                           
REMARK   3   NUMBER OF REFLECTIONS             : 39904                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.193                           
REMARK   3   FREE R VALUE                     : 0.232                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : 3987                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.88                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.89                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2731                       
REMARK   3   BIN FREE R VALUE                    : 0.3033                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 61                           
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 3737                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 3                                       
REMARK   3   SOLVENT ATOMS            : 422                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 35.90                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 26.70                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -2.97400                                             
REMARK   3    B22 (A**2) : 1.80500                                              
REMARK   3    B33 (A**2) : 1.16900                                              
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 2.12100                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.21                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.14                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 5.00                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.26                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : 0.18                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.005                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.336                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 23.15                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 0.785                           
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : ISOTROPIC                                 
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   KSOL        : NULL                                                 
REMARK   3   BSOL        : NULL                                                 
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1WXO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-JAN-05.                  
REMARK 100 THE DEPOSITION ID IS D_1000024124.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 16-NOV-04                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 6.4                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SPRING-8                           
REMARK 200  BEAMLINE                       : BL41XU                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.97932                            
REMARK 200  MONOCHROMATOR                  : SI                                 
REMARK 200  OPTICS                         : MIRROR                             
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : TRUNCATE, HKL-2000                 
REMARK 200  DATA SCALING SOFTWARE          : CCP4 (TRUNCATE)                    
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 39904                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.880                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.8                               
REMARK 200  DATA REDUNDANCY                : 5.500                              
REMARK 200  R MERGE                    (I) : 0.07100                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 10.1000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.95                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 98.8                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 4.70                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.38200                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 3.500                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: AMORE                                                 
REMARK 200 STARTING MODEL: PDB ENTRY 1V7O                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 46.15                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG8000, MES-NA, PH 6.4, VAPOR           
REMARK 280  DIFFUSION, HANGING DROP, TEMPERATURE 293K                           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       48.98550            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2, 3                                                 
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 3                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: C                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     LEU A   153                                                      
REMARK 465     GLU A   154                                                      
REMARK 465     ASN A   155                                                      
REMARK 465     PRO A   156                                                      
REMARK 465     SER A   157                                                      
REMARK 465     ASN B   155                                                      
REMARK 465     PRO B   156                                                      
REMARK 465     SER B   157                                                      
REMARK 465     LEU C   153                                                      
REMARK 465     GLU C   154                                                      
REMARK 465     ASN C   155                                                      
REMARK 465     PRO C   156                                                      
REMARK 465     SER C   157                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    LEU B 153   N   -  CA  -  C   ANGL. DEV. =  19.7 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    TRP A 111      -53.07   -139.80                                   
REMARK 500    GLU B 109      129.87    -35.81                                   
REMARK 500    TRP B 111      -56.87   -136.41                                   
REMARK 500    LYS C  36      108.57   -163.07                                   
REMARK 500    GLU C 109      123.43    -34.80                                   
REMARK 500    TRP C 111      -50.92   -136.38                                   
REMARK 500    LEU C 151       36.63    -92.27                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A1001  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS A   9   NE2                                                    
REMARK 620 2 HIS A  13   NE2 118.8                                              
REMARK 620 3 CYS A 116   SG   89.6 124.9                                        
REMARK 620 4 HIS A 120   NE2 105.5 101.2 116.1                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN B1002  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS B   9   NE2                                                    
REMARK 620 2 HIS B  13   NE2 116.1                                              
REMARK 620 3 CYS B 116   SG   97.6 122.7                                        
REMARK 620 4 HIS B 120   NE2  98.9 101.7 117.9                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN C1003  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS C   9   NE2                                                    
REMARK 620 2 HIS C  13   NE2 115.2                                              
REMARK 620 3 CYS C 116   SG   98.3 126.8                                        
REMARK 620 4 HIS C 120   NE2  95.6  95.7 122.0                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1001                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1002                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 1003                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1V7O   RELATED DB: PDB                                   
REMARK 900 THE SAME PROTEIN IN APO-FORM                                         
REMARK 900 RELATED ID: 1WNU   RELATED DB: PDB                                   
REMARK 900 THE SAME PROTEIN IN COMPLEX WITH L-SERINE AND ZINC                   
DBREF  1WXO A    1   157  UNP    O58307   O58307_PYRHO     1    157             
DBREF  1WXO B    1   157  UNP    O58307   O58307_PYRHO     1    157             
DBREF  1WXO C    1   157  UNP    O58307   O58307_PYRHO     1    157             
SEQRES   1 A  157  MET TYR SER ILE GLU VAL ARG THR HIS SER ALA LEU HIS          
SEQRES   2 A  157  VAL VAL LYS GLY ALA VAL VAL LYS VAL LEU GLY SER GLU          
SEQRES   3 A  157  ALA LYS TRP THR TYR SER THR TYR VAL LYS GLY ASN LYS          
SEQRES   4 A  157  GLY VAL LEU ILE VAL LYS PHE ASP ARG LYS PRO SER ASP          
SEQRES   5 A  157  GLU GLU ILE ARG GLU ILE GLU ARG LEU ALA ASN GLU LYS          
SEQRES   6 A  157  VAL LYS GLU ASN ALA PRO ILE LYS ILE TYR GLU LEU PRO          
SEQRES   7 A  157  ARG GLU GLU ALA GLU LYS MET PHE GLY GLU ASP MET TYR          
SEQRES   8 A  157  ASP LEU PHE PRO VAL PRO GLU ASP VAL ARG ILE LEU LYS          
SEQRES   9 A  157  VAL VAL VAL ILE GLU ASP TRP ASN VAL ASN ALA CYS ASN          
SEQRES  10 A  157  LYS GLU HIS THR LYS THR THR GLY GLU ILE GLY PRO ILE          
SEQRES  11 A  157  LYS ILE ARG LYS VAL ARG PHE ARG LYS SER LYS GLY LEU          
SEQRES  12 A  157  LEU GLU ILE HIS PHE GLU LEU LEU GLU LEU GLU ASN PRO          
SEQRES  13 A  157  SER                                                          
SEQRES   1 B  157  MET TYR SER ILE GLU VAL ARG THR HIS SER ALA LEU HIS          
SEQRES   2 B  157  VAL VAL LYS GLY ALA VAL VAL LYS VAL LEU GLY SER GLU          
SEQRES   3 B  157  ALA LYS TRP THR TYR SER THR TYR VAL LYS GLY ASN LYS          
SEQRES   4 B  157  GLY VAL LEU ILE VAL LYS PHE ASP ARG LYS PRO SER ASP          
SEQRES   5 B  157  GLU GLU ILE ARG GLU ILE GLU ARG LEU ALA ASN GLU LYS          
SEQRES   6 B  157  VAL LYS GLU ASN ALA PRO ILE LYS ILE TYR GLU LEU PRO          
SEQRES   7 B  157  ARG GLU GLU ALA GLU LYS MET PHE GLY GLU ASP MET TYR          
SEQRES   8 B  157  ASP LEU PHE PRO VAL PRO GLU ASP VAL ARG ILE LEU LYS          
SEQRES   9 B  157  VAL VAL VAL ILE GLU ASP TRP ASN VAL ASN ALA CYS ASN          
SEQRES  10 B  157  LYS GLU HIS THR LYS THR THR GLY GLU ILE GLY PRO ILE          
SEQRES  11 B  157  LYS ILE ARG LYS VAL ARG PHE ARG LYS SER LYS GLY LEU          
SEQRES  12 B  157  LEU GLU ILE HIS PHE GLU LEU LEU GLU LEU GLU ASN PRO          
SEQRES  13 B  157  SER                                                          
SEQRES   1 C  157  MET TYR SER ILE GLU VAL ARG THR HIS SER ALA LEU HIS          
SEQRES   2 C  157  VAL VAL LYS GLY ALA VAL VAL LYS VAL LEU GLY SER GLU          
SEQRES   3 C  157  ALA LYS TRP THR TYR SER THR TYR VAL LYS GLY ASN LYS          
SEQRES   4 C  157  GLY VAL LEU ILE VAL LYS PHE ASP ARG LYS PRO SER ASP          
SEQRES   5 C  157  GLU GLU ILE ARG GLU ILE GLU ARG LEU ALA ASN GLU LYS          
SEQRES   6 C  157  VAL LYS GLU ASN ALA PRO ILE LYS ILE TYR GLU LEU PRO          
SEQRES   7 C  157  ARG GLU GLU ALA GLU LYS MET PHE GLY GLU ASP MET TYR          
SEQRES   8 C  157  ASP LEU PHE PRO VAL PRO GLU ASP VAL ARG ILE LEU LYS          
SEQRES   9 C  157  VAL VAL VAL ILE GLU ASP TRP ASN VAL ASN ALA CYS ASN          
SEQRES  10 C  157  LYS GLU HIS THR LYS THR THR GLY GLU ILE GLY PRO ILE          
SEQRES  11 C  157  LYS ILE ARG LYS VAL ARG PHE ARG LYS SER LYS GLY LEU          
SEQRES  12 C  157  LEU GLU ILE HIS PHE GLU LEU LEU GLU LEU GLU ASN PRO          
SEQRES  13 C  157  SER                                                          
HET     ZN  A1001       1                                                       
HET     ZN  B1002       1                                                       
HET     ZN  C1003       1                                                       
HETNAM      ZN ZINC ION                                                         
FORMUL   4   ZN    3(ZN 2+)                                                     
FORMUL   7  HOH   *422(H2 O)                                                    
HELIX    1   1 SER A    3  GLY A   24  1                                  22    
HELIX    2   2 SER A   25  LYS A   28  5                                   4    
HELIX    3   3 SER A   51  ASN A   69  1                                  19    
HELIX    4   4 ARG A   79  GLY A   87  1                                   9    
HELIX    5   5 GLU A   88  TYR A   91  5                                   4    
HELIX    6   6 THR A  123  GLY A  128  5                                   6    
HELIX    7   7 SER B    3  GLY B   24  1                                  22    
HELIX    8   8 SER B   25  LYS B   28  5                                   4    
HELIX    9   9 SER B   51  ASN B   69  1                                  19    
HELIX   10  10 ARG B   79  GLY B   87  1                                   9    
HELIX   11  11 GLU B   88  TYR B   91  5                                   4    
HELIX   12  12 THR B  123  GLY B  128  5                                   6    
HELIX   13  13 SER C    3  GLY C   24  1                                  22    
HELIX   14  14 SER C   25  LYS C   28  5                                   4    
HELIX   15  15 SER C   51  ASN C   69  1                                  19    
HELIX   16  16 ARG C   79  GLY C   87  1                                   9    
HELIX   17  17 GLU C   88  TYR C   91  5                                   4    
HELIX   18  18 THR C  123  GLY C  128  5                                   6    
SHEET    1   A 4 THR A  30  LYS A  36  0                                        
SHEET    2   A 4 LYS A  39  LYS A  45 -1  O  ILE A  43   N  TYR A  31           
SHEET    3   A 4 LEU A 143  LEU A 150 -1  O  LEU A 144   N  VAL A  44           
SHEET    4   A 4 ILE A 130  PHE A 137 -1  N  ARG A 136   O  GLU A 145           
SHEET    1   B 3 LYS A  73  PRO A  78  0                                        
SHEET    2   B 3 ILE A 102  ILE A 108 -1  O  VAL A 107   N  LYS A  73           
SHEET    3   B 3 ASN A 112  ALA A 115 -1  O  ASN A 114   N  VAL A 106           
SHEET    1   C 4 THR B  30  LYS B  36  0                                        
SHEET    2   C 4 LYS B  39  LYS B  45 -1  O  ILE B  43   N  TYR B  31           
SHEET    3   C 4 LEU B 143  LEU B 150 -1  O  ILE B 146   N  LEU B  42           
SHEET    4   C 4 ILE B 130  ARG B 138 -1  N  ARG B 138   O  LEU B 143           
SHEET    1   D 3 LYS B  73  PRO B  78  0                                        
SHEET    2   D 3 ILE B 102  ILE B 108 -1  O  VAL B 105   N  TYR B  75           
SHEET    3   D 3 ASN B 112  ALA B 115 -1  O  ASN B 114   N  VAL B 106           
SHEET    1   E 4 THR C  30  LYS C  36  0                                        
SHEET    2   E 4 LYS C  39  LYS C  45 -1  O  ILE C  43   N  TYR C  31           
SHEET    3   E 4 LEU C 143  LEU C 150 -1  O  ILE C 146   N  LEU C  42           
SHEET    4   E 4 ILE C 130  ARG C 138 -1  N  ARG C 136   O  GLU C 145           
SHEET    1   F 3 LYS C  73  PRO C  78  0                                        
SHEET    2   F 3 ILE C 102  ILE C 108 -1  O  VAL C 105   N  TYR C  75           
SHEET    3   F 3 ASN C 112  ALA C 115 -1  O  ASN C 114   N  VAL C 106           
LINK         NE2 HIS A   9                ZN    ZN A1001     1555   1555  2.03  
LINK         NE2 HIS A  13                ZN    ZN A1001     1555   1555  2.21  
LINK         SG  CYS A 116                ZN    ZN A1001     1555   1555  2.27  
LINK         NE2 HIS A 120                ZN    ZN A1001     1555   1555  1.95  
LINK         NE2 HIS B   9                ZN    ZN B1002     1555   1555  1.94  
LINK         NE2 HIS B  13                ZN    ZN B1002     1555   1555  2.09  
LINK         SG  CYS B 116                ZN    ZN B1002     1555   1555  2.32  
LINK         NE2 HIS B 120                ZN    ZN B1002     1555   1555  1.95  
LINK         NE2 HIS C   9                ZN    ZN C1003     1555   1555  1.95  
LINK         NE2 HIS C  13                ZN    ZN C1003     1555   1555  2.15  
LINK         SG  CYS C 116                ZN    ZN C1003     1555   1555  2.23  
LINK         NE2 HIS C 120                ZN    ZN C1003     1555   1555  1.95  
SITE     1 AC1  4 HIS A   9  HIS A  13  CYS A 116  HIS A 120                    
SITE     1 AC2  4 HIS B   9  HIS B  13  CYS B 116  HIS B 120                    
SITE     1 AC3  4 HIS C   9  HIS C  13  CYS C 116  HIS C 120                    
CRYST1   42.472   97.971   60.584  90.00  95.81  90.00 P 1 21 1      6          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.023545  0.000000  0.002396        0.00000                         
SCALE2      0.000000  0.010207  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.016591        0.00000