PDB Short entry for 1X11 HEADER COMPLEX (PEPTIDE BINDING MODULE/PEPTIDE)28-JUL-97 1X11 TITLE X11 PTB DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: X11; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PTB DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 13-MER PEPTIDE; COMPND 8 CHAIN: C, D; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2 KEYWDS COMPLEX (PEPTIDE BINDING MODULE/PEPTIDE), PTB DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR C.-H.LEE,Z.ZHANG,J.KURIYAN REVDAT 4 09-JUN-09 1X11 1 REVDAT REVDAT 3 24-FEB-09 1X11 1 VERSN REVDAT 2 02-DEC-08 1X11 1 ATOM REMARK SEQADV REVDAT 1 14-JAN-98 1X11 0 JRNL AUTH Z.ZHANG,C.H.LEE,V.MANDIYAN,J.P.BORG,B.MARGOLIS, JRNL AUTH 2 J.SCHLESSINGER,J.KURIYAN JRNL TITL SEQUENCE-SPECIFIC RECOGNITION OF THE JRNL TITL 2 INTERNALIZATION MOTIF OF THE ALZHEIMER'S AMYLOID JRNL TITL 3 PRECURSOR PROTEIN BY THE X11 PTB DOMAIN. JRNL REF EMBO J. V. 16 6141 1997 JRNL REFN ISSN 0261-4189 JRNL PMID 9321393 JRNL DOI 10.1093/EMBOJ/16.20.6141 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.8 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 82.7 REMARK 3 NUMBER OF REFLECTIONS : 12047 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2713 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 483 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.50 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : PARAM19.SOL REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 MISSING RESIDUES CORRESPOND TO DISORDERED REGIONS THAT WERE REMARK 3 NOT MODELLED. REMARK 4 REMARK 4 1X11 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : AUG-96 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH2R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 97157 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.30200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: X-PLOR 3.8 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.70000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.30000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.30000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.85000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.30000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.30000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 116.55000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.30000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.30000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 38.85000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.30000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.30000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 116.55000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 77.70000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -74.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 74.60000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -74.60000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 155.40000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 111.90000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 -37.30000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 38.85000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 37.30000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 37.30000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 116.55000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 37.30000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 37.30000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 116.55000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 369 REMARK 465 LEU A 370 REMARK 465 ALA A 371 REMARK 465 LYS A 372 REMARK 465 SER A 373 REMARK 465 ARG A 374 REMARK 465 LYS A 375 REMARK 465 LYS A 376 REMARK 465 ALA A 377 REMARK 465 PRO A 378 REMARK 465 GLU A 379 REMARK 465 GLY A 380 REMARK 465 GLU A 381 REMARK 465 SER A 382 REMARK 465 GLN A 383 REMARK 465 PRO A 384 REMARK 465 ARG A 432 REMARK 465 ARG A 433 REMARK 465 ILE A 434 REMARK 465 PRO A 435 REMARK 465 ARG A 436 REMARK 465 SER A 437 REMARK 465 ASN A 438 REMARK 465 SER A 439 REMARK 465 GLN A 440 REMARK 465 GLU A 441 REMARK 465 ASN A 442 REMARK 465 VAL A 443 REMARK 465 GLU A 444 REMARK 465 ALA A 445 REMARK 465 SER A 446 REMARK 465 HIS A 447 REMARK 465 PRO A 448 REMARK 465 SER A 449 REMARK 465 GLN A 450 REMARK 465 ASN A 493 REMARK 465 PRO A 494 REMARK 465 GLU C 13 REMARK 465 MSE B 323 REMARK 465 GLU B 324 REMARK 465 ASP B 325 REMARK 465 LEU B 326 REMARK 465 ILE B 327 REMARK 465 ASP B 328 REMARK 465 GLY B 329 REMARK 465 SER B 344 REMARK 465 ASP B 345 REMARK 465 LYS B 346 REMARK 465 THR B 347 REMARK 465 PRO B 348 REMARK 465 SER B 349 REMARK 465 LYS B 350 REMARK 465 ASN B 351 REMARK 465 ARG B 374 REMARK 465 LYS B 375 REMARK 465 LYS B 376 REMARK 465 ALA B 377 REMARK 465 PRO B 378 REMARK 465 GLU B 379 REMARK 465 GLY B 380 REMARK 465 GLU B 381 REMARK 465 SER B 382 REMARK 465 GLN B 383 REMARK 465 PRO B 384 REMARK 465 ARG B 432 REMARK 465 ARG B 433 REMARK 465 ILE B 434 REMARK 465 PRO B 435 REMARK 465 ARG B 436 REMARK 465 SER B 437 REMARK 465 ASN B 438 REMARK 465 SER B 439 REMARK 465 GLN B 440 REMARK 465 GLU B 441 REMARK 465 ASN B 442 REMARK 465 VAL B 443 REMARK 465 GLU B 444 REMARK 465 ALA B 445 REMARK 465 SER B 446 REMARK 465 HIS B 447 REMARK 465 PRO B 448 REMARK 465 SER B 449 REMARK 465 GLN B 450 REMARK 465 ASP B 451 REMARK 465 GLY B 452 REMARK 465 LYS B 453 REMARK 465 ARG B 454 REMARK 465 GLN B 455 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 346 CG CD CE NZ REMARK 470 ASP A 451 CG OD1 OD2 REMARK 470 LYS A 453 CG CD CE NZ REMARK 470 LYS B 369 CG CD CE NZ REMARK 470 LYS B 372 CG CD CE NZ REMARK 470 SER B 373 OG REMARK 470 LYS B 457 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 460 CB CYS A 460 SG -0.377 REMARK 500 CYS B 460 CB CYS B 460 SG -0.379 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 325 -166.54 -124.69 REMARK 500 GLN A 395 -3.77 -145.86 REMARK 500 GLN A 405 13.18 50.17 REMARK 500 TYR A 456 -56.37 -123.42 REMARK 500 ALA A 489 -73.25 -65.80 REMARK 500 LYS C 10 -38.89 -38.89 REMARK 500 LYS B 372 -153.75 -76.15 REMARK 500 ASP B 403 -62.27 -106.08 REMARK 500 SER B 417 -62.29 -93.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 37 DISTANCE = 5.20 ANGSTROMS REMARK 525 HOH B 49 DISTANCE = 6.80 ANGSTROMS REMARK 525 HOH B 61 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH B 63 DISTANCE = 7.28 ANGSTROMS REMARK 525 HOH A 69 DISTANCE = 5.26 ANGSTROMS REMARK 525 HOH B 141 DISTANCE = 5.49 ANGSTROMS REMARK 525 HOH A 97 DISTANCE = 5.38 ANGSTROMS REMARK 525 HOH A 127 DISTANCE = 5.15 ANGSTROMS REMARK 525 HOH A 134 DISTANCE = 5.43 ANGSTROMS REMARK 525 HOH A 135 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH A 146 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A 149 DISTANCE = 6.73 ANGSTROMS DBREF 1X11 A 324 494 UNP Q02410 APB1_HUMAN 453 623 DBREF 1X11 C 1 13 UNP P05067 A4_HUMAN 754 766 DBREF 1X11 B 324 494 UNP Q02410 APB1_HUMAN 453 623 DBREF 1X11 D 1 13 UNP P05067 A4_HUMAN 754 766 SEQADV 1X11 MSE A 354 UNP Q02410 MET 483 MODIFIED RESIDUE SEQADV 1X11 MSE A 355 UNP Q02410 MET 484 MODIFIED RESIDUE SEQADV 1X11 MSE A 366 UNP Q02410 MET 495 MODIFIED RESIDUE SEQADV 1X11 MSE A 385 UNP Q02410 MET 514 MODIFIED RESIDUE SEQADV 1X11 MSE A 408 UNP Q02410 MET 537 MODIFIED RESIDUE SEQADV 1X11 MSE A 409 UNP Q02410 MET 538 MODIFIED RESIDUE SEQADV 1X11 MSE A 429 UNP Q02410 MET 558 MODIFIED RESIDUE SEQADV 1X11 MSE A 458 UNP Q02410 MET 587 MODIFIED RESIDUE SEQADV 1X11 MSE B 354 UNP Q02410 MET 483 MODIFIED RESIDUE SEQADV 1X11 MSE B 355 UNP Q02410 MET 484 MODIFIED RESIDUE SEQADV 1X11 MSE B 366 UNP Q02410 MET 495 MODIFIED RESIDUE SEQADV 1X11 MSE B 385 UNP Q02410 MET 514 MODIFIED RESIDUE SEQADV 1X11 MSE B 408 UNP Q02410 MET 537 MODIFIED RESIDUE SEQADV 1X11 MSE B 409 UNP Q02410 MET 538 MODIFIED RESIDUE SEQADV 1X11 MSE B 429 UNP Q02410 MET 558 MODIFIED RESIDUE SEQADV 1X11 MSE B 458 UNP Q02410 MET 587 MODIFIED RESIDUE SEQRES 1 A 172 MSE GLU ASP LEU ILE ASP GLY ILE ILE PHE ALA ALA ASN SEQRES 2 A 172 TYR LEU GLY SER THR GLN LEU LEU SER ASP LYS THR PRO SEQRES 3 A 172 SER LYS ASN VAL ARG MSE MSE GLN ALA GLN GLU ALA VAL SEQRES 4 A 172 SER ARG ILE LYS MSE ALA GLN LYS LEU ALA LYS SER ARG SEQRES 5 A 172 LYS LYS ALA PRO GLU GLY GLU SER GLN PRO MSE THR GLU SEQRES 6 A 172 VAL ASP LEU PHE ILE LEU THR GLN ARG ILE LYS VAL LEU SEQRES 7 A 172 ASN ALA ASP THR GLN GLU THR MSE MSE ASP HIS PRO LEU SEQRES 8 A 172 ARG THR ILE SER TYR ILE ALA ASP ILE GLY ASN ILE VAL SEQRES 9 A 172 VAL LEU MSE ALA ARG ARG ARG ILE PRO ARG SER ASN SER SEQRES 10 A 172 GLN GLU ASN VAL GLU ALA SER HIS PRO SER GLN ASP GLY SEQRES 11 A 172 LYS ARG GLN TYR LYS MSE ILE CYS HIS VAL PHE GLU SER SEQRES 12 A 172 GLU ASP ALA GLN LEU ILE ALA GLN SER ILE GLY GLN ALA SEQRES 13 A 172 PHE SER VAL ALA TYR GLN GLU PHE LEU ARG ALA ASN GLY SEQRES 14 A 172 ILE ASN PRO SEQRES 1 C 13 GLN ASN GLY TYR GLU ASN PRO THR TYR LYS PHE PHE GLU SEQRES 1 B 172 MSE GLU ASP LEU ILE ASP GLY ILE ILE PHE ALA ALA ASN SEQRES 2 B 172 TYR LEU GLY SER THR GLN LEU LEU SER ASP LYS THR PRO SEQRES 3 B 172 SER LYS ASN VAL ARG MSE MSE GLN ALA GLN GLU ALA VAL SEQRES 4 B 172 SER ARG ILE LYS MSE ALA GLN LYS LEU ALA LYS SER ARG SEQRES 5 B 172 LYS LYS ALA PRO GLU GLY GLU SER GLN PRO MSE THR GLU SEQRES 6 B 172 VAL ASP LEU PHE ILE LEU THR GLN ARG ILE LYS VAL LEU SEQRES 7 B 172 ASN ALA ASP THR GLN GLU THR MSE MSE ASP HIS PRO LEU SEQRES 8 B 172 ARG THR ILE SER TYR ILE ALA ASP ILE GLY ASN ILE VAL SEQRES 9 B 172 VAL LEU MSE ALA ARG ARG ARG ILE PRO ARG SER ASN SER SEQRES 10 B 172 GLN GLU ASN VAL GLU ALA SER HIS PRO SER GLN ASP GLY SEQRES 11 B 172 LYS ARG GLN TYR LYS MSE ILE CYS HIS VAL PHE GLU SER SEQRES 12 B 172 GLU ASP ALA GLN LEU ILE ALA GLN SER ILE GLY GLN ALA SEQRES 13 B 172 PHE SER VAL ALA TYR GLN GLU PHE LEU ARG ALA ASN GLY SEQRES 14 B 172 ILE ASN PRO SEQRES 1 D 13 GLN ASN GLY TYR GLU ASN PRO THR TYR LYS PHE PHE GLU MODRES 1X11 MSE A 323 MET SELENOMETHIONINE MODRES 1X11 MSE A 354 MET SELENOMETHIONINE MODRES 1X11 MSE A 355 MET SELENOMETHIONINE MODRES 1X11 MSE A 366 MET SELENOMETHIONINE MODRES 1X11 MSE A 385 MET SELENOMETHIONINE MODRES 1X11 MSE A 408 MET SELENOMETHIONINE MODRES 1X11 MSE A 409 MET SELENOMETHIONINE MODRES 1X11 MSE A 429 MET SELENOMETHIONINE MODRES 1X11 MSE A 458 MET SELENOMETHIONINE MODRES 1X11 MSE B 354 MET SELENOMETHIONINE MODRES 1X11 MSE B 355 MET SELENOMETHIONINE MODRES 1X11 MSE B 366 MET SELENOMETHIONINE MODRES 1X11 MSE B 385 MET SELENOMETHIONINE MODRES 1X11 MSE B 408 MET SELENOMETHIONINE MODRES 1X11 MSE B 409 MET SELENOMETHIONINE MODRES 1X11 MSE B 429 MET SELENOMETHIONINE MODRES 1X11 MSE B 458 MET SELENOMETHIONINE HET MSE A 323 11 HET MSE A 354 9 HET MSE A 355 9 HET MSE A 366 9 HET MSE A 385 9 HET MSE A 408 9 HET MSE A 409 9 HET MSE A 429 9 HET MSE A 458 9 HET MSE B 354 9 HET MSE B 355 9 HET MSE B 366 9 HET MSE B 385 9 HET MSE B 408 9 HET MSE B 409 9 HET MSE B 429 9 HET MSE B 458 9 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 17(C5 H11 N O2 SE) FORMUL 5 HOH *161(H2 O) HELIX 1 1 ALA A 357 ILE A 364 1 8 HELIX 2 2 LEU A 413 THR A 415 5 3 HELIX 3 3 ALA A 468 ALA A 489 1 22 HELIX 4 4 ALA B 357 ALA B 371 1 15 HELIX 5 5 LEU B 413 THR B 415 5 3 HELIX 6 6 ALA B 468 ASN B 490 1 23 HELIX 7 7 TYR D 9 PHE D 11 5 3 SHEET 1 A 6 ILE A 397 ASN A 401 0 SHEET 2 A 6 THR A 386 ILE A 392 -1 N PHE A 391 O LYS A 398 SHEET 3 A 6 ILE A 330 THR A 340 -1 N TYR A 336 O THR A 386 SHEET 4 A 6 ILE A 459 GLU A 464 -1 N GLU A 464 O ASN A 335 SHEET 5 A 6 ILE A 425 ALA A 430 -1 N ALA A 430 O ILE A 459 SHEET 6 A 6 ALA A 420 ILE A 422 -1 N ILE A 422 O ILE A 425 SHEET 1 B 6 ILE B 397 ASN B 401 0 SHEET 2 B 6 THR B 386 ILE B 392 -1 N PHE B 391 O LYS B 398 SHEET 3 B 6 ILE B 331 THR B 340 -1 N TYR B 336 O THR B 386 SHEET 4 B 6 ILE B 459 GLU B 464 -1 N GLU B 464 O ASN B 335 SHEET 5 B 6 ILE B 425 ALA B 430 -1 N ALA B 430 O ILE B 459 SHEET 6 B 6 ALA B 420 ILE B 422 -1 N ILE B 422 O ILE B 425 LINK C MSE A 323 N GLU A 324 1555 1555 1.33 LINK N MSE A 354 C ARG A 353 1555 1555 1.33 LINK C MSE A 354 N MSE A 355 1555 1555 1.34 LINK C MSE A 355 N GLN A 356 1555 1555 1.34 LINK N MSE A 366 C LYS A 365 1555 1555 1.33 LINK C MSE A 366 N ALA A 367 1555 1555 1.33 LINK C MSE A 385 N THR A 386 1555 1555 1.33 LINK N MSE A 408 C THR A 407 1555 1555 1.33 LINK C MSE A 408 N MSE A 409 1555 1555 1.33 LINK C MSE A 409 N ASP A 410 1555 1555 1.33 LINK N MSE A 429 C LEU A 428 1555 1555 1.33 LINK C MSE A 429 N ALA A 430 1555 1555 1.34 LINK N MSE A 458 C LYS A 457 1555 1555 1.34 LINK C MSE A 458 N ILE A 459 1555 1555 1.33 LINK N MSE B 354 C ARG B 353 1555 1555 1.33 LINK C MSE B 354 N MSE B 355 1555 1555 1.33 LINK C MSE B 355 N GLN B 356 1555 1555 1.33 LINK N MSE B 366 C LYS B 365 1555 1555 1.32 LINK C MSE B 366 N ALA B 367 1555 1555 1.33 LINK C MSE B 385 N THR B 386 1555 1555 1.32 LINK N MSE B 408 C THR B 407 1555 1555 1.33 LINK C MSE B 408 N MSE B 409 1555 1555 1.33 LINK C MSE B 409 N ASP B 410 1555 1555 1.32 LINK N MSE B 429 C LEU B 428 1555 1555 1.32 LINK C MSE B 429 N ALA B 430 1555 1555 1.34 LINK N MSE B 458 C LYS B 457 1555 1555 1.33 LINK C MSE B 458 N ILE B 459 1555 1555 1.33 CRYST1 74.600 74.600 155.400 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013405 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013405 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006435 0.00000 MTRIX1 1 0.280000 -0.569000 0.773000 13.11000 1 MTRIX2 1 0.030000 0.810000 0.585000 -35.94000 1 MTRIX3 1 -0.960000 -0.141000 0.244000 100.10000 1 HETATM 1 N MSE A 323 74.799 12.434 82.995 1.00 44.39 N HETATM 2 CA MSE A 323 74.171 12.388 81.645 1.00 42.22 C HETATM 3 C MSE A 323 73.123 11.288 81.622 1.00 42.66 C HETATM 4 O MSE A 323 73.419 10.135 81.967 1.00 42.38 O HETATM 5 CB MSE A 323 75.225 12.077 80.573 1.00 39.31 C HETATM 6 CG MSE A 323 74.737 12.284 79.166 1.00 37.88 C HETATM 7 SE MSE A 323 75.946 11.857 77.907 1.00 42.13 SE HETATM 8 CE MSE A 323 76.968 13.290 77.875 1.00 37.81 C HETATM 9 H1 MSE A 323 75.118 11.469 83.224 1.00 0.00 H HETATM 10 H2 MSE A 323 74.071 12.730 83.670 1.00 0.00 H HETATM 11 H3 MSE A 323 75.601 13.089 82.977 1.00 0.00 H