PDB Short entry for 1X3B
HEADER    CELL ADHESION                           02-MAY-05   1X3B              
TITLE     SOLUTION STRUCTURE OF THE FAS1 DOMAIN OF HUMAN TRANSFORMING GROWTH    
TITLE    2 FACTOR-BETA INDUCED PROTEIN IG-H3                                    
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: TRANSFORMING GROWTH FACTOR-BETA INDUCED PROTEIN IG-H3;     
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: FAS1 DOMAIN;                                               
COMPND   5 SYNONYM: BETA IG-H3, KERATO-EPITHELIN, RGD-CONTAINING COLLAGEN       
COMPND   6 ASSOCIATED PROTEIN, RGD-CAP;                                         
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: TGFBI;                                                         
SOURCE   6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   7 EXPRESSION_SYSTEM_PLASMID: P040524-06;                               
SOURCE   8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS                           
KEYWDS    BETA IG-H3, CELL ADHESION PROTEIN, EXTRACELLULAR MATRIX PROTEIN,      
KEYWDS   2 INTEGRIN-INTERACTING MOTIF, FAS1 DOMAIN, FASCICLIN, STRUCTURAL       
KEYWDS   3 GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND         
KEYWDS   4 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS            
KEYWDS   5 INITIATIVE, RSGI, CELL ADHESION                                      
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    M.YONEYAMA,T.TOMIZAWA,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, 
AUTHOR   2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)               
REVDAT   4   02-MAR-22 1X3B    1       REMARK SEQADV                            
REVDAT   3   24-FEB-09 1X3B    1       VERSN                                    
REVDAT   2   17-JAN-06 1X3B    1       JRNL   TITLE                             
REVDAT   1   02-NOV-05 1X3B    0                                                
JRNL        AUTH   M.YONEYAMA,T.TOMIZAWA,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,   
JRNL        AUTH 2 S.YOKOYAMA                                                   
JRNL        TITL   SOLUTION STRUCTURE OF THE FAS1 DOMAIN OF HUMAN TRANSFORMING  
JRNL        TITL 2 GROWTH FACTOR-BETA INDUCED PROTEIN IG-H3                     
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : XWINNMR 2.6, CYANA 1.0.7                             
REMARK   3   AUTHORS     : BRUKER (XWINNMR), GUENTERT, P. (CYANA)               
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1X3B COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-MAY-05.                  
REMARK 100 THE DEPOSITION ID IS D_1000024325.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 296                                
REMARK 210  PH                             : 7.0                                
REMARK 210  IONIC STRENGTH                 : 120                                
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 0.39MM FAS1 DOMAIN U-15N, 13C;     
REMARK 210                                   20MM D-TRIS-HCL (PH7.0); 100MM     
REMARK 210                                   NACL; 1MM D-DTT; 0.02% NAN3; 10%   
REMARK 210                                   D2O                                
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D_15N-SEPARATED_NOESY; 3D_13C     
REMARK 210                                   -SEPARATED_NOESY                   
REMARK 210  SPECTROMETER FIELD STRENGTH    : 800 MHZ                            
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NMRPIPE 20031121, NMRVIEW 5.0.4,   
REMARK 210                                   KUJIRA 0.921, CYANA 1.0.7          
REMARK 210   METHOD USED                   : TORSION ANGLE DYNAMICS             
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : TARGET FUNCTION,STRUCTURES WITH    
REMARK 210                                   THE LEAST RESTRAINT VIOLATIONS     
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    THR A    10     H    VAL A    14              1.49            
REMARK 500   O    ALA A    72     H    LYS A    76              1.52            
REMARK 500   H    ALA A   120     O    VAL A   133              1.55            
REMARK 500   O    LYS A   108     H    VAL A   111              1.59            
REMARK 500   O    ASP A    13     H    GLY A    17              1.59            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 SER A   2      -61.46   -175.57                                   
REMARK 500  1 SER A   5      -60.60     77.00                                   
REMARK 500  1 GLU A  40      168.01    -45.78                                   
REMARK 500  1 THR A  49     -166.48    -73.93                                   
REMARK 500  1 LEU A  71      -70.04    -62.51                                   
REMARK 500  1 ILE A  89     -122.07    -79.74                                   
REMARK 500  1 ALA A  91      -55.05   -148.69                                   
REMARK 500  1 ASN A 109       18.14     57.63                                   
REMARK 500  1 ASP A 123       62.07     72.90                                   
REMARK 500  1 ALA A 126     -166.70   -113.36                                   
REMARK 500  1 ASN A 128       46.80   -151.99                                   
REMARK 500  1 SER A 145      -58.04   -145.37                                   
REMARK 500  2 PHE A  21       54.85   -108.28                                   
REMARK 500  2 ASP A  81       40.46   -101.46                                   
REMARK 500  2 GLU A  82      160.77    171.54                                   
REMARK 500  2 SER A  86       67.05    -69.47                                   
REMARK 500  2 ALA A  91      -51.06   -177.26                                   
REMARK 500  2 ASN A 110       10.82     81.96                                   
REMARK 500  2 ASN A 115       33.17     75.46                                   
REMARK 500  2 ASP A 123       60.50     76.62                                   
REMARK 500  2 ALA A 126     -166.35   -122.76                                   
REMARK 500  2 ASN A 128       48.02   -158.58                                   
REMARK 500  2 ASN A 136      148.01    179.39                                   
REMARK 500  2 SER A 145      -58.10   -142.41                                   
REMARK 500  3 MET A   8      128.66     66.17                                   
REMARK 500  3 PHE A  21       58.37   -109.16                                   
REMARK 500  3 ARG A  61      -73.65    -70.36                                   
REMARK 500  3 GLU A  82      158.32    178.43                                   
REMARK 500  3 ILE A  89     -112.84    -63.74                                   
REMARK 500  3 ALA A  91      -71.87     79.38                                   
REMARK 500  3 ASN A 109       18.75     59.59                                   
REMARK 500  3 ASN A 115       31.56     75.02                                   
REMARK 500  3 ASP A 123       65.92     63.32                                   
REMARK 500  3 ALA A 126     -166.24   -122.15                                   
REMARK 500  3 ASN A 128       49.43   -152.59                                   
REMARK 500  3 ASN A 136      144.94    174.43                                   
REMARK 500  3 SER A 141      104.16    -45.70                                   
REMARK 500  4 SER A   2       88.66     67.91                                   
REMARK 500  4 MET A   8      128.64     62.76                                   
REMARK 500  4 PHE A  21       54.53   -103.80                                   
REMARK 500  4 ARG A  61      -73.64    -64.22                                   
REMARK 500  4 LEU A  71      -70.16    -50.21                                   
REMARK 500  4 GLU A  82      158.71    171.65                                   
REMARK 500  4 ALA A  91      -60.39   -175.87                                   
REMARK 500  4 ASN A 109       18.92     56.50                                   
REMARK 500  4 LYS A 116       30.16     73.64                                   
REMARK 500  4 ASP A 123       61.62     75.72                                   
REMARK 500  4 ALA A 126     -167.08   -112.09                                   
REMARK 500  4 ASN A 128       47.35   -169.66                                   
REMARK 500  4 ASN A 136      149.74    170.86                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     294 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: HSS001001558.1   RELATED DB: TARGETDB                    
DBREF  1X3B A    8   140  UNP    Q15582   BGH3_HUMAN     502    634             
SEQADV 1X3B GLY A    1  UNP  Q15582              CLONING ARTIFACT               
SEQADV 1X3B SER A    2  UNP  Q15582              CLONING ARTIFACT               
SEQADV 1X3B SER A    3  UNP  Q15582              CLONING ARTIFACT               
SEQADV 1X3B GLY A    4  UNP  Q15582              CLONING ARTIFACT               
SEQADV 1X3B SER A    5  UNP  Q15582              CLONING ARTIFACT               
SEQADV 1X3B SER A    6  UNP  Q15582              CLONING ARTIFACT               
SEQADV 1X3B GLY A    7  UNP  Q15582              CLONING ARTIFACT               
SEQADV 1X3B SER A  141  UNP  Q15582              CLONING ARTIFACT               
SEQADV 1X3B GLY A  142  UNP  Q15582              CLONING ARTIFACT               
SEQADV 1X3B PRO A  143  UNP  Q15582              CLONING ARTIFACT               
SEQADV 1X3B SER A  144  UNP  Q15582              CLONING ARTIFACT               
SEQADV 1X3B SER A  145  UNP  Q15582              CLONING ARTIFACT               
SEQADV 1X3B GLY A  146  UNP  Q15582              CLONING ARTIFACT               
SEQRES   1 A  146  GLY SER SER GLY SER SER GLY MET GLY THR VAL MET ASP          
SEQRES   2 A  146  VAL LEU LYS GLY ASP ASN ARG PHE SER MET LEU VAL ALA          
SEQRES   3 A  146  ALA ILE GLN SER ALA GLY LEU THR GLU THR LEU ASN ARG          
SEQRES   4 A  146  GLU GLY VAL TYR THR VAL PHE ALA PRO THR ASN GLU ALA          
SEQRES   5 A  146  PHE ARG ALA LEU PRO PRO ARG GLU ARG SER ARG LEU LEU          
SEQRES   6 A  146  GLY ASP ALA LYS GLU LEU ALA ASN ILE LEU LYS TYR HIS          
SEQRES   7 A  146  ILE GLY ASP GLU ILE LEU VAL SER GLY GLY ILE GLY ALA          
SEQRES   8 A  146  LEU VAL ARG LEU LYS SER LEU GLN GLY ASP LYS LEU GLU          
SEQRES   9 A  146  VAL SER LEU LYS ASN ASN VAL VAL SER VAL ASN LYS GLU          
SEQRES  10 A  146  PRO VAL ALA GLU PRO ASP ILE MET ALA THR ASN GLY VAL          
SEQRES  11 A  146  VAL HIS VAL ILE THR ASN VAL LEU GLN PRO SER GLY PRO          
SEQRES  12 A  146  SER SER GLY                                                  
HELIX    1   1 THR A   10  ASP A   18  1                                   9    
HELIX    2   2 PHE A   21  GLY A   32  1                                  12    
HELIX    3   3 LEU A   33  ARG A   39  1                                   7    
HELIX    4   4 ASN A   50  LEU A   56  1                                   7    
HELIX    5   5 GLU A   60  ASP A   67  1                                   8    
HELIX    6   6 ASP A   67  ILE A   79  1                                  13    
SHEET    1   A 3 THR A  44  VAL A  45  0                                        
SHEET    2   A 3 VAL A 130  ILE A 134  1  O  HIS A 132   N  VAL A  45           
SHEET    3   A 3 VAL A 119  MET A 125 -1  N  ALA A 120   O  VAL A 133           
SHEET    1   B 3 VAL A  93  LEU A  95  0                                        
SHEET    2   B 3 LEU A 103  LYS A 108 -1  O  LEU A 103   N  LEU A  95           
SHEET    3   B 3 VAL A 111  VAL A 114 -1  O  VAL A 111   N  LYS A 108           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000