PDB Short entry for 1X8E HEADER ISOMERASE 18-AUG-04 1X8E TITLE CRYSTAL STRUCTURE OF PYROCOCCUS FURIOSUS PHOSPHOGLUCOSE ISOMERASE FREE TITLE 2 ENZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE-6-PHOSPHATE ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GPI, PHOSPHOGLUCOSE ISOMERASE, PGI, PHOSPHOHEXOSE ISOMERASE, COMPND 5 PHI; COMPND 6 EC: 5.3.1.9; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 2261; SOURCE 4 GENE: PGIA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET24-D KEYWDS CUPIN SUPERFAMILY, PYROCOCCUS FURIOSUS, HYPERTHERMOPHILE, KEYWDS 2 PHOSPHOGLUCOSE ISOMERASE, EXTREMEOPHILE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.M.BERRISFORD,J.AKERBOOM,S.BROUNS,S.E.SEDELNIKOVA,A.P.TURNBULL,J.VAN AUTHOR 2 DER OOST,L.SALMON,R.HARDRE,I.A.MURRAY,G.M.BLACKBURN,D.W.RICE, AUTHOR 3 P.J.BAKER REVDAT 4 23-AUG-23 1X8E 1 SEQADV REVDAT 3 24-SEP-14 1X8E 1 JRNL VERSN REVDAT 2 24-FEB-09 1X8E 1 VERSN REVDAT 1 12-OCT-04 1X8E 0 JRNL AUTH J.M.BERRISFORD,J.AKERBOOM,S.BROUNS,S.E.SEDELNIKOVA, JRNL AUTH 2 A.P.TURNBULL,J.VAN DER OOST,L.SALMON,R.HARDRE,I.A.MURRAY, JRNL AUTH 3 G.M.BLACKBURN,D.W.RICE,P.J.BAKER JRNL TITL THE STRUCTURES OF INHIBITOR COMPLEXES OF PYROCOCCUS FURIOSUS JRNL TITL 2 PHOSPHOGLUCOSE ISOMERASE PROVIDE INSIGHTS INTO SUBSTRATE JRNL TITL 3 BINDING AND CATALYSIS. JRNL REF J.MOL.BIOL. V. 343 649 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 15465052 JRNL DOI 10.1016/J.JMB.2004.08.061 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 9481 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 481 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 687 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.3210 REMARK 3 BIN FREE R VALUE SET COUNT : 37 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3038 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.74000 REMARK 3 B22 (A**2) : -4.43000 REMARK 3 B33 (A**2) : 0.68000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.447 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.373 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.835 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.913 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.850 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3122 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2778 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4222 ; 1.763 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6492 ; 0.906 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 376 ; 8.785 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 436 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3466 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 650 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 567 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3105 ; 0.231 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2004 ; 0.092 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 35 ; 0.185 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 9 ; 0.250 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 54 ; 0.284 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.039 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1872 ; 0.795 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3020 ; 1.479 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1250 ; 1.660 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1202 ; 2.901 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1X8E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-SEP-04. REMARK 100 THE DEPOSITION ID IS D_1000030068. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-AUG-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : YALE MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10096 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 53.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.14100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 4.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 4.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.43900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1X82 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M TRI-SODIUM CITRATE, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.11800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.83300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.93250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.83300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.11800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.93250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: SUBUNITS A AND B GENERATE THE BIOLOGICAL DIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 189 REMARK 465 LYS B 189 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 4 CD GLU B 4 OE2 0.072 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 48 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP A 143 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 159 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP B 29 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP B 65 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP B 143 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 47 -50.81 -156.59 REMARK 500 GLU A 61 59.92 -52.46 REMARK 500 PRO A 132 150.94 -48.93 REMARK 500 ASP A 159 -139.08 -168.09 REMARK 500 LYS A 166 -78.27 -86.73 REMARK 500 LYS B 21 108.98 74.37 REMARK 500 GLU B 47 -44.76 -146.42 REMARK 500 ASP B 48 74.38 50.73 REMARK 500 LYS B 62 80.40 -164.92 REMARK 500 GLU B 63 112.91 4.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 159 TYR A 160 -143.39 REMARK 500 TYR A 160 GLY A 161 -142.27 REMARK 500 HIS B 88 PHE B 89 148.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU A 60 13.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PLZ RELATED DB: PDB REMARK 900 RELATED ID: 1X82 RELATED DB: PDB REMARK 900 RELATED ID: 1X7N RELATED DB: PDB DBREF 1X8E A 1 189 UNP P83194 G6PI_PYRFU 1 189 DBREF 1X8E B 1 189 UNP P83194 G6PI_PYRFU 1 189 SEQADV 1X8E MET A 0 UNP P83194 INITIATING METHIONINE SEQADV 1X8E MET B 0 UNP P83194 INITIATING METHIONINE SEQRES 1 A 190 MET MET TYR LYS GLU PRO PHE GLY VAL LYS VAL ASP PHE SEQRES 2 A 190 GLU THR GLY ILE ILE GLU GLY ALA LYS LYS SER VAL ARG SEQRES 3 A 190 ARG LEU SER ASP MET GLU GLY TYR PHE VAL ASP GLU ARG SEQRES 4 A 190 ALA TRP LYS GLU LEU VAL GLU LYS GLU ASP PRO VAL VAL SEQRES 5 A 190 TYR GLU VAL TYR ALA VAL GLU GLN GLU GLU LYS GLU GLY SEQRES 6 A 190 ASP LEU ASN PHE ALA THR THR VAL LEU TYR PRO GLY LYS SEQRES 7 A 190 VAL GLY LYS GLU PHE PHE PHE THR LYS GLY HIS PHE HIS SEQRES 8 A 190 ALA LYS LEU ASP ARG ALA GLU VAL TYR VAL ALA LEU LYS SEQRES 9 A 190 GLY LYS GLY GLY MET LEU LEU GLN THR PRO GLU GLY ASP SEQRES 10 A 190 ALA LYS TRP ILE SER MET GLU PRO GLY THR VAL VAL TYR SEQRES 11 A 190 VAL PRO PRO TYR TRP ALA HIS ARG THR VAL ASN ILE GLY SEQRES 12 A 190 ASP GLU PRO PHE ILE PHE LEU ALA ILE TYR PRO ALA ASP SEQRES 13 A 190 ALA GLY HIS ASP TYR GLY THR ILE ALA GLU LYS GLY PHE SEQRES 14 A 190 SER LYS ILE VAL ILE GLU GLU ASN GLY GLU VAL LYS VAL SEQRES 15 A 190 VAL ASP ASN PRO ARG TRP LYS LYS SEQRES 1 B 190 MET MET TYR LYS GLU PRO PHE GLY VAL LYS VAL ASP PHE SEQRES 2 B 190 GLU THR GLY ILE ILE GLU GLY ALA LYS LYS SER VAL ARG SEQRES 3 B 190 ARG LEU SER ASP MET GLU GLY TYR PHE VAL ASP GLU ARG SEQRES 4 B 190 ALA TRP LYS GLU LEU VAL GLU LYS GLU ASP PRO VAL VAL SEQRES 5 B 190 TYR GLU VAL TYR ALA VAL GLU GLN GLU GLU LYS GLU GLY SEQRES 6 B 190 ASP LEU ASN PHE ALA THR THR VAL LEU TYR PRO GLY LYS SEQRES 7 B 190 VAL GLY LYS GLU PHE PHE PHE THR LYS GLY HIS PHE HIS SEQRES 8 B 190 ALA LYS LEU ASP ARG ALA GLU VAL TYR VAL ALA LEU LYS SEQRES 9 B 190 GLY LYS GLY GLY MET LEU LEU GLN THR PRO GLU GLY ASP SEQRES 10 B 190 ALA LYS TRP ILE SER MET GLU PRO GLY THR VAL VAL TYR SEQRES 11 B 190 VAL PRO PRO TYR TRP ALA HIS ARG THR VAL ASN ILE GLY SEQRES 12 B 190 ASP GLU PRO PHE ILE PHE LEU ALA ILE TYR PRO ALA ASP SEQRES 13 B 190 ALA GLY HIS ASP TYR GLY THR ILE ALA GLU LYS GLY PHE SEQRES 14 B 190 SER LYS ILE VAL ILE GLU GLU ASN GLY GLU VAL LYS VAL SEQRES 15 B 190 VAL ASP ASN PRO ARG TRP LYS LYS HELIX 1 1 SER A 28 MET A 30 5 3 HELIX 2 2 ASP A 36 GLU A 47 1 12 HELIX 3 3 SER B 28 GLU B 31 5 4 HELIX 4 4 ASP B 36 GLU B 47 1 12 HELIX 5 5 TYR B 160 LYS B 166 1 7 SHEET 1 A 7 PHE A 6 LYS A 9 0 SHEET 2 A 7 THR B 126 VAL B 130 -1 O VAL B 127 N VAL A 8 SHEET 3 A 7 GLU B 97 LYS B 103 -1 N TYR B 99 O VAL B 128 SHEET 4 A 7 PHE B 146 PRO B 153 -1 O LEU B 149 N VAL B 100 SHEET 5 A 7 LEU B 66 LEU B 73 -1 N ASN B 67 O TYR B 152 SHEET 6 A 7 VAL B 50 VAL B 57 -1 N VAL B 57 O PHE B 68 SHEET 7 A 7 LYS B 22 ARG B 26 -1 N ARG B 25 O TYR B 52 SHEET 1 B 7 LYS A 21 ARG A 26 0 SHEET 2 B 7 VAL A 50 VAL A 57 -1 O VAL A 54 N SER A 23 SHEET 3 B 7 LEU A 66 LEU A 73 -1 O PHE A 68 N VAL A 57 SHEET 4 B 7 PHE A 146 PRO A 153 -1 O PHE A 146 N LEU A 73 SHEET 5 B 7 GLU A 97 LYS A 103 -1 N LYS A 103 O ILE A 147 SHEET 6 B 7 THR A 126 VAL A 130 -1 O THR A 126 N ALA A 101 SHEET 7 B 7 PHE B 6 LYS B 9 -1 O VAL B 8 N VAL A 127 SHEET 1 C 2 LYS A 77 VAL A 78 0 SHEET 2 C 2 GLU A 81 PHE A 82 -1 O GLU A 81 N VAL A 78 SHEET 1 D 3 ALA A 117 MET A 122 0 SHEET 2 D 3 GLY A 106 GLN A 111 -1 N LEU A 110 O LYS A 118 SHEET 3 D 3 ALA A 135 ASN A 140 -1 O ARG A 137 N LEU A 109 SHEET 1 E 2 LYS A 170 GLU A 175 0 SHEET 2 E 2 GLU A 178 ASP A 183 -1 O VAL A 182 N ILE A 171 SHEET 1 F 2 LYS B 77 VAL B 78 0 SHEET 2 F 2 GLU B 81 PHE B 82 -1 O GLU B 81 N VAL B 78 SHEET 1 G 3 ALA B 117 MET B 122 0 SHEET 2 G 3 GLY B 106 GLN B 111 -1 N GLY B 106 O MET B 122 SHEET 3 G 3 ALA B 135 ASN B 140 -1 O VAL B 139 N GLY B 107 SHEET 1 H 2 LYS B 170 GLU B 175 0 SHEET 2 H 2 GLU B 178 ASP B 183 -1 O LYS B 180 N ILE B 173 CRYST1 68.236 73.865 77.666 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014655 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013538 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012876 0.00000