PDB Short entry for 1XIW HEADER MEMBRANE PROTEIN/IMMUNE SYSTEM 22-SEP-04 1XIW TITLE CRYSTAL STRUCTURE OF HUMAN CD3-E/D DIMER IN COMPLEX WITH A UCHT1 TITLE 2 SINGLE-CHAIN ANTIBODY FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: T-CELL SURFACE GLYCOPROTEIN CD3 EPSILON CHAIN; COMPND 3 CHAIN: A, E; COMPND 4 FRAGMENT: ECTODOMAIN; COMPND 5 SYNONYM: T-CELL SURFACE ANTIGEN T3/LEU-4 EPSILON CHAIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: T-CELL SURFACE GLYCOPROTEIN CD3 DELTA CHAIN; COMPND 9 CHAIN: B, F; COMPND 10 FRAGMENT: ECTODOMAIN; COMPND 11 SYNONYM: T-CELL RECEPTOR T3 DELTA CHAIN; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: IMMUNOGLOBULIN LIGHT CHAIN VARIABLE REGION; COMPND 15 CHAIN: C, G; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: IMMUNOGLOBULIN HEAVY CHAIN VARIABLE REGION; COMPND 19 CHAIN: D, H; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CD3E, T3E; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PLM1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: CD3D, T3D; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PLM1; SOURCE 21 MOL_ID: 3; SOURCE 22 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 23 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 24 ORGANISM_TAXID: 10090; SOURCE 25 GENE: UCHT1; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 27 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 28 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 29 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 30 EXPRESSION_SYSTEM_PLASMID: PET17B; SOURCE 31 MOL_ID: 4; SOURCE 32 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 33 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 34 ORGANISM_TAXID: 10090; SOURCE 35 GENE: UCHT1; SOURCE 36 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 37 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 38 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 39 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 40 EXPRESSION_SYSTEM_PLASMID: PET17B KEYWDS CD3-EPSILON, CD3-DELTA, UCHT1-SCFV, IMMUNOGLOBULIN FOLD, ANTIBODY- KEYWDS 2 ANTIGEN COMPLEX, MEMBRANE PROTEIN-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.L.ARNETT,S.C.HARRISON,D.C.WILEY REVDAT 5 23-AUG-23 1XIW 1 SEQADV REVDAT 4 31-JAN-18 1XIW 1 REMARK REVDAT 3 24-FEB-09 1XIW 1 VERSN REVDAT 2 07-DEC-04 1XIW 1 JRNL REVDAT 1 16-NOV-04 1XIW 0 JRNL AUTH K.L.ARNETT,S.C.HARRISON,D.C.WILEY JRNL TITL CRYSTAL STRUCTURE OF A HUMAN CD3-EPSILON/DELTA DIMER IN JRNL TITL 2 COMPLEX WITH A UCHT1 SINGLE-CHAIN ANTIBODY FRAGMENT. JRNL REF PROC.NATL.ACAD.SCI.USA V. 101 16268 2004 JRNL REFN ISSN 0027-8424 JRNL PMID 15534202 JRNL DOI 10.1073/PNAS.0407359101 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.17 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2409958.110 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 60759 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3068 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 9690 REMARK 3 BIN R VALUE (WORKING SET) : 0.2060 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 508 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.012 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6044 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 319 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.66000 REMARK 3 B22 (A**2) : -4.74000 REMARK 3 B33 (A**2) : 5.40000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.11 REMARK 3 LOW RESOLUTION CUTOFF (A) : 50.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.18 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.830 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.420 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 4.590 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.980 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 6.640 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 39.27 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1XIW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-SEP-04. REMARK 100 THE DEPOSITION ID IS D_1000030403. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-AUG-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60988 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 24.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.35700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 6FAB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, SODIUM CHLORIDE, HEPES, PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 22K, TEMPERATURE REMARK 280 295.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.43700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.37350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.66300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.37350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.43700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.66300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 GLY A 3 REMARK 465 ASN A 4 REMARK 465 GLU A 5 REMARK 465 GLU A 6 REMARK 465 MET A 7 REMARK 465 GLY A 8 REMARK 465 GLY A 9 REMARK 465 ILE A 10 REMARK 465 THR A 11 REMARK 465 GLU A 103 REMARK 465 MET A 104 REMARK 465 ASP A 105 REMARK 465 GLY B 54 REMARK 465 THR B 55 REMARK 465 ASP B 56 REMARK 465 ILE B 57 REMARK 465 TYR B 58 REMARK 465 LYS B 59 REMARK 465 ASP B 60 REMARK 465 LYS B 61 REMARK 465 CYS B 75 REMARK 465 VAL B 76 REMARK 465 GLU B 77 REMARK 465 LEU B 78 REMARK 465 ASP B 79 REMARK 465 LYS C 108 REMARK 465 MET E 1 REMARK 465 ASP E 2 REMARK 465 GLY E 3 REMARK 465 ASN E 4 REMARK 465 GLU E 5 REMARK 465 GLU E 6 REMARK 465 MET E 7 REMARK 465 GLY E 8 REMARK 465 GLY E 9 REMARK 465 ILE E 10 REMARK 465 THR E 11 REMARK 465 GLU E 99 REMARK 465 ASN E 100 REMARK 465 CYS E 101 REMARK 465 MET E 102 REMARK 465 GLU E 103 REMARK 465 MET E 104 REMARK 465 ASP E 105 REMARK 465 MET F 1 REMARK 465 GLY F 54 REMARK 465 THR F 55 REMARK 465 ASP F 56 REMARK 465 ILE F 57 REMARK 465 TYR F 58 REMARK 465 LYS F 59 REMARK 465 ASP F 60 REMARK 465 LYS F 61 REMARK 465 GLN F 73 REMARK 465 SER F 74 REMARK 465 CYS F 75 REMARK 465 VAL F 76 REMARK 465 GLU F 77 REMARK 465 LEU F 78 REMARK 465 ASP F 79 REMARK 465 LYS G 108 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS B 52 CA - CB - SG ANGL. DEV. = 8.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 30 -148.39 -112.54 REMARK 500 GLU A 58 -127.72 56.55 REMARK 500 VAL A 97 52.35 -112.32 REMARK 500 GLU B 9 -113.92 65.90 REMARK 500 THR B 18 -160.23 -117.39 REMARK 500 SER B 19 154.57 -49.68 REMARK 500 LEU B 31 79.79 -113.50 REMARK 500 ASP B 45 70.42 43.62 REMARK 500 GLN B 73 85.40 51.25 REMARK 500 THR C 52 -46.74 68.74 REMARK 500 ASN C 78 63.38 36.77 REMARK 500 ALA C 85 -179.44 -174.66 REMARK 500 LYS D 43 -67.44 -153.09 REMARK 500 SER D 85 59.76 35.43 REMARK 500 ALA D 92 -177.81 -179.46 REMARK 500 SER D 105 13.06 -151.55 REMARK 500 ASP E 48 52.80 -92.65 REMARK 500 ASP E 50 -40.37 76.97 REMARK 500 ASP E 51 98.25 -60.06 REMARK 500 GLU E 58 -124.69 53.00 REMARK 500 GLU F 9 -112.54 61.87 REMARK 500 LEU F 31 76.80 -110.04 REMARK 500 THR G 52 -48.49 64.78 REMARK 500 ALA G 85 -175.93 179.66 REMARK 500 LYS H 43 -179.56 54.41 REMARK 500 ASN H 44 82.89 85.64 REMARK 500 LEU H 45 152.99 -48.16 REMARK 500 SER H 85 66.48 35.61 REMARK 500 ALA H 92 -178.92 -176.32 REMARK 500 SER H 105 12.54 -149.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE THE CHIMERA PROTEIN CONSISTS OF IMMUNOGLOBULIN LIGHT REMARK 999 CHAIN VARIABLE REGION (CHAINS C, G), A LINKER GGGGSGGGGSGGGGS, REMARK 999 AND IMMUNOGLOBULIN HEAVY CHAIN VARIABLE REGION (CHAINS D, H). REMARK 999 HOWEVER, THE LINKER GGGGSGGGGSGGGGS ARE NOT MODELED DUE TO REMARK 999 DISORDER. THE CONFLICTS ARE DUE TO IMMUNOGLOBULIN DOMAIN REMARK 999 VARIABLE REGION (V) DBREF 1XIW A 2 105 UNP P07766 CD3E_HUMAN 23 126 DBREF 1XIW E 2 105 UNP P07766 CD3E_HUMAN 23 126 DBREF 1XIW B 2 79 UNP P04234 CD3D_HUMAN 23 100 DBREF 1XIW F 2 79 UNP P04234 CD3D_HUMAN 23 100 DBREF 1XIW C 2 108 PIR PH0888 PH0888 1 107 DBREF 1XIW G 2 108 PIR PH0888 PH0888 1 107 DBREF 1XIW D 1 122 PIR PH0887 PH0887 1 122 DBREF 1XIW H 1 122 PIR PH0887 PH0887 1 122 SEQADV 1XIW MET A 1 UNP P07766 INITIATING METHIONINE SEQADV 1XIW MET E 1 UNP P07766 INITIATING METHIONINE SEQADV 1XIW MET B 1 UNP P04234 INITIATING METHIONINE SEQADV 1XIW MET F 1 UNP P04234 INITIATING METHIONINE SEQADV 1XIW MET C 1 PIR PH0888 INITIATING METHIONINE SEQADV 1XIW MET G 1 PIR PH0888 INITIATING METHIONINE SEQADV 1XIW LEU D 70 PIR PH0887 PHE 70 SEE REMARK 999 SEQADV 1XIW GLN D 114 PIR PH0887 ALA 114 SEE REMARK 999 SEQADV 1XIW LEU D 118 PIR PH0887 VAL 118 SEE REMARK 999 SEQADV 1XIW PHE D 121 PIR PH0887 SER 121 SEE REMARK 999 SEQADV 1XIW LEU H 70 PIR PH0887 PHE 70 SEE REMARK 999 SEQADV 1XIW GLN H 114 PIR PH0887 ALA 114 SEE REMARK 999 SEQADV 1XIW LEU H 118 PIR PH0887 VAL 118 SEE REMARK 999 SEQADV 1XIW PHE H 121 PIR PH0887 SER 121 SEE REMARK 999 SEQRES 1 A 105 MET ASP GLY ASN GLU GLU MET GLY GLY ILE THR GLN THR SEQRES 2 A 105 PRO TYR LYS VAL SER ILE SER GLY THR THR VAL ILE LEU SEQRES 3 A 105 THR CYS PRO GLN TYR PRO GLY SER GLU ILE LEU TRP GLN SEQRES 4 A 105 HIS ASN ASP LYS ASN ILE GLY GLY ASP GLU ASP ASP LYS SEQRES 5 A 105 ASN ILE GLY SER ASP GLU ASP HIS LEU SER LEU LYS GLU SEQRES 6 A 105 PHE SER GLU LEU GLU GLN SER GLY TYR TYR VAL CYS TYR SEQRES 7 A 105 PRO ARG GLY SER LYS PRO GLU ASP ALA ASN PHE TYR LEU SEQRES 8 A 105 TYR LEU ARG ALA ARG VAL CYS GLU ASN CYS MET GLU MET SEQRES 9 A 105 ASP SEQRES 1 B 79 MET LYS ILE PRO ILE GLU GLU LEU GLU ASP ARG VAL PHE SEQRES 2 B 79 VAL ASN CYS ASN THR SER ILE THR TRP VAL GLU GLY THR SEQRES 3 B 79 VAL GLY THR LEU LEU SER ASP ILE THR ARG LEU ASP LEU SEQRES 4 B 79 GLY LYS ARG ILE LEU ASP PRO ARG GLY ILE TYR ARG CYS SEQRES 5 B 79 ASN GLY THR ASP ILE TYR LYS ASP LYS GLU SER THR VAL SEQRES 6 B 79 GLN VAL HIS TYR ARG MET CYS GLN SER CYS VAL GLU LEU SEQRES 7 B 79 ASP SEQRES 1 C 108 MET ASP ILE GLN MET THR GLN THR THR SER SER LEU SER SEQRES 2 C 108 ALA SER LEU GLY ASP ARG VAL THR ILE SER CYS ARG ALA SEQRES 3 C 108 SER GLN ASP ILE ARG ASN TYR LEU ASN TRP TYR GLN GLN SEQRES 4 C 108 LYS PRO ASP GLY THR VAL LYS LEU LEU ILE TYR TYR THR SEQRES 5 C 108 SER ARG LEU HIS SER GLY VAL PRO SER LYS PHE SER GLY SEQRES 6 C 108 SER GLY SER GLY THR ASP TYR SER LEU THR ILE SER ASN SEQRES 7 C 108 LEU GLU GLN GLU ASP ILE ALA THR TYR PHE CYS GLN GLN SEQRES 8 C 108 GLY ASN THR LEU PRO TRP THR PHE ALA GLY GLY THR LYS SEQRES 9 C 108 LEU GLU ILE LYS SEQRES 1 D 122 GLU VAL GLN LEU GLN GLN SER GLY PRO GLU LEU VAL LYS SEQRES 2 D 122 PRO GLY ALA SER MET LYS ILE SER CYS LYS ALA SER GLY SEQRES 3 D 122 TYR SER PHE THR GLY TYR THR MET ASN TRP VAL LYS GLN SEQRES 4 D 122 SER HIS GLY LYS ASN LEU GLU TRP MET GLY LEU ILE ASN SEQRES 5 D 122 PRO TYR LYS GLY VAL SER THR TYR ASN GLN LYS PHE LYS SEQRES 6 D 122 ASP LYS ALA THR LEU THR VAL ASP LYS SER SER SER THR SEQRES 7 D 122 ALA TYR MET GLU LEU LEU SER LEU THR SER GLU ASP SER SEQRES 8 D 122 ALA VAL TYR TYR CYS ALA ARG SER GLY TYR TYR GLY ASP SEQRES 9 D 122 SER ASP TRP TYR PHE ASP VAL TRP GLY GLN GLY THR THR SEQRES 10 D 122 LEU THR VAL PHE SER SEQRES 1 E 105 MET ASP GLY ASN GLU GLU MET GLY GLY ILE THR GLN THR SEQRES 2 E 105 PRO TYR LYS VAL SER ILE SER GLY THR THR VAL ILE LEU SEQRES 3 E 105 THR CYS PRO GLN TYR PRO GLY SER GLU ILE LEU TRP GLN SEQRES 4 E 105 HIS ASN ASP LYS ASN ILE GLY GLY ASP GLU ASP ASP LYS SEQRES 5 E 105 ASN ILE GLY SER ASP GLU ASP HIS LEU SER LEU LYS GLU SEQRES 6 E 105 PHE SER GLU LEU GLU GLN SER GLY TYR TYR VAL CYS TYR SEQRES 7 E 105 PRO ARG GLY SER LYS PRO GLU ASP ALA ASN PHE TYR LEU SEQRES 8 E 105 TYR LEU ARG ALA ARG VAL CYS GLU ASN CYS MET GLU MET SEQRES 9 E 105 ASP SEQRES 1 F 79 MET LYS ILE PRO ILE GLU GLU LEU GLU ASP ARG VAL PHE SEQRES 2 F 79 VAL ASN CYS ASN THR SER ILE THR TRP VAL GLU GLY THR SEQRES 3 F 79 VAL GLY THR LEU LEU SER ASP ILE THR ARG LEU ASP LEU SEQRES 4 F 79 GLY LYS ARG ILE LEU ASP PRO ARG GLY ILE TYR ARG CYS SEQRES 5 F 79 ASN GLY THR ASP ILE TYR LYS ASP LYS GLU SER THR VAL SEQRES 6 F 79 GLN VAL HIS TYR ARG MET CYS GLN SER CYS VAL GLU LEU SEQRES 7 F 79 ASP SEQRES 1 G 108 MET ASP ILE GLN MET THR GLN THR THR SER SER LEU SER SEQRES 2 G 108 ALA SER LEU GLY ASP ARG VAL THR ILE SER CYS ARG ALA SEQRES 3 G 108 SER GLN ASP ILE ARG ASN TYR LEU ASN TRP TYR GLN GLN SEQRES 4 G 108 LYS PRO ASP GLY THR VAL LYS LEU LEU ILE TYR TYR THR SEQRES 5 G 108 SER ARG LEU HIS SER GLY VAL PRO SER LYS PHE SER GLY SEQRES 6 G 108 SER GLY SER GLY THR ASP TYR SER LEU THR ILE SER ASN SEQRES 7 G 108 LEU GLU GLN GLU ASP ILE ALA THR TYR PHE CYS GLN GLN SEQRES 8 G 108 GLY ASN THR LEU PRO TRP THR PHE ALA GLY GLY THR LYS SEQRES 9 G 108 LEU GLU ILE LYS SEQRES 1 H 122 GLU VAL GLN LEU GLN GLN SER GLY PRO GLU LEU VAL LYS SEQRES 2 H 122 PRO GLY ALA SER MET LYS ILE SER CYS LYS ALA SER GLY SEQRES 3 H 122 TYR SER PHE THR GLY TYR THR MET ASN TRP VAL LYS GLN SEQRES 4 H 122 SER HIS GLY LYS ASN LEU GLU TRP MET GLY LEU ILE ASN SEQRES 5 H 122 PRO TYR LYS GLY VAL SER THR TYR ASN GLN LYS PHE LYS SEQRES 6 H 122 ASP LYS ALA THR LEU THR VAL ASP LYS SER SER SER THR SEQRES 7 H 122 ALA TYR MET GLU LEU LEU SER LEU THR SER GLU ASP SER SEQRES 8 H 122 ALA VAL TYR TYR CYS ALA ARG SER GLY TYR TYR GLY ASP SEQRES 9 H 122 SER ASP TRP TYR PHE ASP VAL TRP GLY GLN GLY THR THR SEQRES 10 H 122 LEU THR VAL PHE SER FORMUL 9 HOH *319(H2 O) HELIX 1 1 SER A 67 SER A 72 1 6 HELIX 2 2 LYS A 83 ALA A 87 5 5 HELIX 3 3 SER B 32 ILE B 34 5 3 HELIX 4 4 ILE B 43 ASP B 45 5 3 HELIX 5 5 GLU C 80 ILE C 84 5 5 HELIX 6 6 SER D 28 THR D 30 5 3 HELIX 7 7 LYS D 74 SER D 76 5 3 HELIX 8 8 THR D 87 SER D 91 5 5 HELIX 9 9 SER E 67 SER E 72 1 6 HELIX 10 10 LYS E 83 ALA E 87 5 5 HELIX 11 11 SER F 32 ILE F 34 5 3 HELIX 12 12 ILE F 43 ASP F 45 5 3 HELIX 13 13 GLU G 80 ILE G 84 5 5 HELIX 14 14 SER H 28 THR H 30 5 3 HELIX 15 15 GLN H 62 LYS H 65 5 4 HELIX 16 16 THR H 87 SER H 91 5 5 SHEET 1 A 4 LYS A 16 SER A 20 0 SHEET 2 A 4 THR A 23 THR A 27 -1 O ILE A 25 N SER A 18 SHEET 3 A 4 HIS A 60 LEU A 63 -1 O LEU A 63 N VAL A 24 SHEET 4 A 4 ILE A 54 ASP A 57 -1 N GLY A 55 O SER A 62 SHEET 1 B 7 LYS A 43 ILE A 45 0 SHEET 2 B 7 ILE A 36 HIS A 40 -1 N HIS A 40 O LYS A 43 SHEET 3 B 7 GLY A 73 PRO A 79 -1 O TYR A 78 N LEU A 37 SHEET 4 B 7 PHE A 89 ALA A 95 -1 O LEU A 93 N GLY A 73 SHEET 5 B 7 SER B 63 ARG B 70 1 O GLN B 66 N TYR A 92 SHEET 6 B 7 ARG B 47 CYS B 52 -1 N TYR B 50 O VAL B 65 SHEET 7 B 7 ILE B 20 GLY B 25 -1 N THR B 21 O ARG B 51 SHEET 1 C 4 ILE B 5 LEU B 8 0 SHEET 2 C 4 ARG B 11 ASN B 15 -1 O PHE B 13 N GLU B 6 SHEET 3 C 4 ARG B 36 LYS B 41 -1 O LEU B 39 N VAL B 12 SHEET 4 C 4 THR B 29 LEU B 31 -1 N THR B 29 O ASP B 38 SHEET 1 D 4 MET C 5 THR C 6 0 SHEET 2 D 4 VAL C 20 ALA C 26 -1 O ARG C 25 N THR C 6 SHEET 3 D 4 ASP C 71 ILE C 76 -1 O LEU C 74 N ILE C 22 SHEET 4 D 4 PHE C 63 SER C 68 -1 N SER C 64 O THR C 75 SHEET 1 E 6 SER C 11 SER C 13 0 SHEET 2 E 6 THR C 103 GLU C 106 1 O GLU C 106 N LEU C 12 SHEET 3 E 6 ALA C 85 GLN C 91 -1 N ALA C 85 O LEU C 105 SHEET 4 E 6 LEU C 34 GLN C 39 -1 N GLN C 39 O THR C 86 SHEET 5 E 6 VAL C 45 TYR C 50 -1 O LEU C 48 N TRP C 36 SHEET 6 E 6 ARG C 54 LEU C 55 -1 O ARG C 54 N TYR C 50 SHEET 1 F 4 SER C 11 SER C 13 0 SHEET 2 F 4 THR C 103 GLU C 106 1 O GLU C 106 N LEU C 12 SHEET 3 F 4 ALA C 85 GLN C 91 -1 N ALA C 85 O LEU C 105 SHEET 4 F 4 THR C 98 PHE C 99 -1 O THR C 98 N GLN C 91 SHEET 1 G 4 GLN D 3 GLN D 6 0 SHEET 2 G 4 MET D 18 SER D 25 -1 O LYS D 23 N GLN D 5 SHEET 3 G 4 THR D 78 LEU D 83 -1 O LEU D 83 N MET D 18 SHEET 4 G 4 ALA D 68 ASP D 73 -1 N THR D 71 O TYR D 80 SHEET 1 H 6 GLU D 10 VAL D 12 0 SHEET 2 H 6 THR D 116 VAL D 120 1 O THR D 117 N GLU D 10 SHEET 3 H 6 ALA D 92 GLY D 100 -1 N ALA D 92 O LEU D 118 SHEET 4 H 6 TYR D 32 SER D 40 -1 N VAL D 37 O TYR D 95 SHEET 5 H 6 ASN D 44 ASN D 52 -1 O GLU D 46 N LYS D 38 SHEET 6 H 6 VAL D 57 TYR D 60 -1 O THR D 59 N LEU D 50 SHEET 1 I 4 GLU D 10 VAL D 12 0 SHEET 2 I 4 THR D 116 VAL D 120 1 O THR D 117 N GLU D 10 SHEET 3 I 4 ALA D 92 GLY D 100 -1 N ALA D 92 O LEU D 118 SHEET 4 I 4 VAL D 111 TRP D 112 -1 O VAL D 111 N ARG D 98 SHEET 1 J 4 LYS E 16 SER E 20 0 SHEET 2 J 4 THR E 23 THR E 27 -1 O ILE E 25 N SER E 18 SHEET 3 J 4 HIS E 60 LEU E 63 -1 O LEU E 63 N VAL E 24 SHEET 4 J 4 ILE E 54 ASP E 57 -1 N GLY E 55 O SER E 62 SHEET 1 K 7 LYS E 43 ILE E 45 0 SHEET 2 K 7 ILE E 36 HIS E 40 -1 N HIS E 40 O LYS E 43 SHEET 3 K 7 GLY E 73 PRO E 79 -1 O TYR E 78 N LEU E 37 SHEET 4 K 7 PHE E 89 ALA E 95 -1 O LEU E 93 N GLY E 73 SHEET 5 K 7 SER F 63 ARG F 70 1 O GLN F 66 N TYR E 92 SHEET 6 K 7 ARG F 47 CYS F 52 -1 N CYS F 52 O SER F 63 SHEET 7 K 7 ILE F 20 GLY F 25 -1 N THR F 21 O ARG F 51 SHEET 1 L 4 ILE F 5 LEU F 8 0 SHEET 2 L 4 ARG F 11 ASN F 15 -1 O PHE F 13 N GLU F 6 SHEET 3 L 4 ARG F 36 LYS F 41 -1 O LEU F 39 N VAL F 12 SHEET 4 L 4 THR F 29 LEU F 31 -1 N LEU F 31 O ARG F 36 SHEET 1 M 4 MET G 5 THR G 6 0 SHEET 2 M 4 VAL G 20 ALA G 26 -1 O ARG G 25 N THR G 6 SHEET 3 M 4 ASP G 71 ILE G 76 -1 O LEU G 74 N ILE G 22 SHEET 4 M 4 PHE G 63 SER G 68 -1 N SER G 64 O THR G 75 SHEET 1 N 6 SER G 11 SER G 13 0 SHEET 2 N 6 THR G 103 GLU G 106 1 O GLU G 106 N LEU G 12 SHEET 3 N 6 ALA G 85 GLN G 91 -1 N ALA G 85 O LEU G 105 SHEET 4 N 6 LEU G 34 GLN G 39 -1 N ASN G 35 O GLN G 90 SHEET 5 N 6 VAL G 45 TYR G 50 -1 O LEU G 48 N TRP G 36 SHEET 6 N 6 ARG G 54 LEU G 55 -1 O ARG G 54 N TYR G 50 SHEET 1 O 4 SER G 11 SER G 13 0 SHEET 2 O 4 THR G 103 GLU G 106 1 O GLU G 106 N LEU G 12 SHEET 3 O 4 ALA G 85 GLN G 91 -1 N ALA G 85 O LEU G 105 SHEET 4 O 4 THR G 98 PHE G 99 -1 O THR G 98 N GLN G 91 SHEET 1 P 4 GLN H 3 GLN H 6 0 SHEET 2 P 4 MET H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 P 4 THR H 78 LEU H 83 -1 O LEU H 83 N MET H 18 SHEET 4 P 4 ALA H 68 ASP H 73 -1 N THR H 71 O TYR H 80 SHEET 1 Q 6 GLU H 10 VAL H 12 0 SHEET 2 Q 6 THR H 116 VAL H 120 1 O THR H 119 N VAL H 12 SHEET 3 Q 6 ALA H 92 GLY H 100 -1 N TYR H 94 O THR H 116 SHEET 4 Q 6 TYR H 32 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 Q 6 GLU H 46 ASN H 52 -1 O MET H 48 N TRP H 36 SHEET 6 Q 6 VAL H 57 TYR H 60 -1 O THR H 59 N LEU H 50 SHEET 1 R 4 GLU H 10 VAL H 12 0 SHEET 2 R 4 THR H 116 VAL H 120 1 O THR H 119 N VAL H 12 SHEET 3 R 4 ALA H 92 GLY H 100 -1 N TYR H 94 O THR H 116 SHEET 4 R 4 PHE H 109 TRP H 112 -1 O VAL H 111 N ARG H 98 SSBOND 1 CYS A 28 CYS A 77 1555 1555 2.05 SSBOND 2 CYS A 101 CYS B 72 1555 1555 2.03 SSBOND 3 CYS B 16 CYS B 52 1555 1555 2.03 SSBOND 4 CYS C 24 CYS C 89 1555 1555 2.06 SSBOND 5 CYS D 22 CYS D 96 1555 1555 2.05 SSBOND 6 CYS E 28 CYS E 77 1555 1555 2.04 SSBOND 7 CYS F 16 CYS F 52 1555 1555 2.03 SSBOND 8 CYS G 24 CYS G 89 1555 1555 2.06 SSBOND 9 CYS H 22 CYS H 96 1555 1555 2.05 CISPEP 1 LEU C 95 PRO C 96 0 -0.18 CISPEP 2 LEU G 95 PRO G 96 0 -0.14 CRYST1 64.874 79.326 150.747 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015414 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012606 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006634 0.00000