PDB Short entry for 1XJP HEADER STRUCTURAL PROTEIN/HYDROLASE 23-SEP-04 1XJP TITLE MOLECULAR DOCKING MODEL OF SARS CORONAVIRUS SPIKE PROTEIN TITLE 2 S1 SUBUNIT WITH ITS RECEPTOR, ACE2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: E2 GLYCOPROTEIN PRECURSOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 17-680; COMPND 5 SYNONYM: SPIKE GLYCOPROTEIN, PEPLOMER PROTEIN; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ANGIOTENSIN I CONVERTING ENZYME 2; ANGIOTENSIN COMPND 8 CONVERTING ENZYME-LIKE PROTEIN; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: RESIDUES 19-615; COMPND 11 SYNONYM: ANGIOTENSIN CONVERTING ENZYME-RELATED 2 COMPND 12 CARBOXYPEPTIDASE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN CORONAVIRUS (STRAIN SARS); SOURCE 3 ORGANISM_COMMON: VIRUSES; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 6 ORGANISM_COMMON: HUMAN KEYWDS ENVELOPE PROTEIN, TRANSMEMBRANE EXPDTA THEORETICAL MODEL AUTHOR Y.ZHANG REVDAT 3 26-JUL-05 1XJP 1 SOURCE REVDAT 2 19-JUL-05 1XJP 1 JRNL REVDAT 1 12-OCT-04 1XJP 0 JRNL AUTH Y.ZHANG,N.ZHENG,P.HAO,Y.CAO,Y.ZHONG JRNL TITL A MOLECULAR DOCKING MODEL OF SARS-COV S1 PROTEIN JRNL TITL 2 IN COMPLEX WITH ITS RECEPTOR, HUMAN ACE2 JRNL REF COMPUT.BIOL.CHEM. V. 29 254 2005 JRNL REFN NE ISSN 1476-9271 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1XJP COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-OCT-2004. REMARK 100 THE RCSB ID CODE IS RCSB030431. REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: NULL REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 O ASP A 17 CB ASN A 129 0.48 REMARK 500 C ASP A 17 CB ASN A 129 0.75 REMARK 500 CA ASN A 281 CB PRO A 470 0.80 REMARK 500 CB ARG A 18 CA PHE A 130 0.88 REMARK 500 CA ARG A 18 N PHE A 130 1.09 REMARK 500 CB ASN A 281 CG PRO A 470 1.11 REMARK 500 N ARG A 18 C ASN A 129 1.13 REMARK 500 CA ARG A 18 C ASN A 129 1.13 REMARK 500 O ASP A 17 CG ASN A 129 1.14 REMARK 500 CE2 PHE A 47 O TYR A 63 1.15 REMARK 500 CE2 PHE A 220 CE1 TYR A 266 1.16 REMARK 500 N ARG A 18 O ASN A 129 1.21 REMARK 500 CB ARG A 18 N PHE A 130 1.21 REMARK 500 O SER A 279 O PRO A 470 1.26 REMARK 500 CA ASN A 281 CG PRO A 470 1.35 REMARK 500 CB CYS A 19 CB ASP A 274 1.36 REMARK 500 CZ TYR A 42 OD2 ASP A 44 1.38 REMARK 500 CB ASN A 281 CD PRO A 470 1.42 REMARK 500 CZ PHE A 220 CE1 TYR A 266 1.49 REMARK 500 CB ARG A 18 C PHE A 130 1.50 REMARK 500 CG ASN A 281 CG PRO A 470 1.55 REMARK 500 NZ LYS A 180 OH TYR A 367 1.58 REMARK 500 CD2 PHE A 47 O TYR A 63 1.61 REMARK 500 OD1 ASN A 321 O TYR A 442 1.62 REMARK 500 OE2 GLU A 162 CB ALA A 167 1.63 REMARK 500 O ASP A 17 CA ASN A 129 1.64 REMARK 500 O CYS A 19 CZ PHE A 130 1.64 REMARK 500 OH TYR A 41 CE1 PHE A 130 1.64 REMARK 500 O PRO A 317 ND2 ASN A 321 1.64 REMARK 500 OH TYR A 41 CD1 PHE A 130 1.67 REMARK 500 CG ARG A 18 C PHE A 130 1.68 REMARK 500 CE2 TYR A 42 OD2 ASP A 44 1.69 REMARK 500 C GLN A 280 CB PRO A 470 1.71 REMARK 500 CB ARG A 18 C ASN A 129 1.73 REMARK 500 C ASP A 17 CA ASN A 129 1.75 REMARK 500 OH TYR A 442 O SER A 659 1.75 REMARK 500 OD1 ASN A 281 CG PRO A 470 1.77 REMARK 500 CE1 TYR A 42 OD2 ASP A 44 1.78 REMARK 500 N ASN A 281 O PRO A 470 1.78 REMARK 500 C ASP A 17 O ASN A 129 1.80 REMARK 500 CA ARG A 18 O ASN A 129 1.83 REMARK 500 N ARG A 18 CA ASN A 129 1.84 REMARK 500 CA ALA A 127 OE1 GLN A 280 1.84 REMARK 500 CG ARG A 18 N PHE A 130 1.85 REMARK 500 NH1 ARG A 449 OE2 GLU B 57 1.86 REMARK 500 CZ PHE A 168 OD1 ASN A 269 1.87 REMARK 500 CE2 PHE A 47 C TYR A 63 1.89 REMARK 500 CG ARG A 18 C ASN A 129 1.90 REMARK 500 CB GLN A 280 CG PRO A 282 1.90 REMARK 500 N ASN A 281 CB PRO A 470 1.90 REMARK 500 N ARG A 18 CB ASN A 129 1.92 REMARK 500 CA ARG A 18 CA PHE A 130 1.92 REMARK 500 O ARG A 18 CD1 PHE A 130 1.92 REMARK 500 CB ARG A 18 O ASN A 129 1.92 REMARK 500 CB GLN A 280 CD PRO A 282 1.93 REMARK 500 C ASN A 281 CB PRO A 470 1.94 REMARK 500 O ASP A 17 OD1 ASN A 129 1.96 REMARK 500 CB PRO A 240 NE2 GLN A 242 1.96 REMARK 500 C ASP A 17 C ASN A 129 1.97 REMARK 500 CB ALA A 127 OE1 GLN A 280 1.97 REMARK 500 CG2 THR A 585 CB ALA A 595 1.97 REMARK 500 O ALA A 612 OE1 GLN A 614 1.98 REMARK 500 CA ASP A 17 CB ASN A 129 2.00 REMARK 500 O ARG A 18 OE1 GLU A 131 2.00 REMARK 500 N ASP A 17 O ASN A 129 2.01 REMARK 500 N ASN A 129 O ASP A 274 2.01 REMARK 500 NE2 GLN A 147 CB SER A 176 2.01 REMARK 500 N ARG A 18 O ASP A 274 2.03 REMARK 500 CD ARG A 18 N PHE A 130 2.03 REMARK 500 CA ASN A 281 CA PRO A 470 2.03 REMARK 500 CE1 TYR A 30 CB PRO A 43 2.04 REMARK 500 N ASN A 281 C PRO A 470 2.04 REMARK 500 CD2 PHE A 220 CE1 TYR A 266 2.05 REMARK 500 N ASN A 281 CA PRO A 470 2.05 REMARK 500 O ARG A 18 CA PHE A 130 2.06 REMARK 500 CE2 PHE A 220 CZ TYR A 266 2.07 REMARK 500 CG ARG A 18 O ASN A 129 2.08 REMARK 500 CE2 PHE A 316 NH1 ARG A 444 2.08 REMARK 500 C GLN A 280 CD PRO A 282 2.09 REMARK 500 CE1 TYR A 200 OD1 ASN A 381 2.10 REMARK 500 CA ASP A 17 O ASN A 129 2.11 REMARK 500 O VAL A 307 CG1 VAL B 298 2.11 REMARK 500 CB ASN A 281 CB PRO A 470 2.12 REMARK 500 CG ARG A 18 CA PHE A 130 2.13 REMARK 500 CA ASN A 281 CD PRO A 470 2.14 REMARK 500 CB SER A 500 CG2 THR A 588 2.14 REMARK 500 O ARG A 18 CG PHE A 130 2.15 REMARK 500 N CYS A 19 CE1 PHE A 130 2.17 REMARK 500 SG CYS A 19 OG1 THR A 21 2.17 REMARK 500 CA ASN A 129 O ASP A 274 2.19 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 18 CA ARG A 18 C 0.255 REMARK 500 PRO A 28 CG PRO A 28 CD -0.226 REMARK 500 PRO A 43 CG PRO A 43 CD -0.227 REMARK 500 PRO A 61 CG PRO A 61 CD -0.226 REMARK 500 PRO A 79 CG PRO A 79 CD -0.227 REMARK 500 PRO A 82 CG PRO A 82 CD -0.226 REMARK 500 PRO A 136 CG PRO A 136 CD -0.227 REMARK 500 PRO A 143 CG PRO A 143 CD -0.226 REMARK 500 PRO A 202 CG PRO A 202 CD -0.227 REMARK 500 PRO A 210 CG PRO A 210 CD -0.226 REMARK 500 PRO A 218 CG PRO A 218 CD -0.227 REMARK 500 PRO A 223 CG PRO A 223 CD -0.226 REMARK 500 PRO A 240 CG PRO A 240 CD -0.227 REMARK 500 PRO A 259 CG PRO A 259 CD -0.226 REMARK 500 ASP A 274 C ALA A 275 N 0.211 REMARK 500 GLN A 280 CA GLN A 280 C 0.189 REMARK 500 GLN A 280 C ASN A 281 N 0.365 REMARK 500 PRO A 282 CG PRO A 282 CD -0.227 REMARK 500 PRO A 309 CG PRO A 309 CD -0.226 REMARK 500 PRO A 317 CG PRO A 317 CD -0.226 REMARK 500 PRO A 324 CG PRO A 324 CD -0.227 REMARK 500 PRO A 335 CG PRO A 335 CD -0.228 REMARK 500 PRO A 399 CG PRO A 399 CD -0.226 REMARK 500 PRO A 413 CG PRO A 413 CD -0.227 REMARK 500 PRO A 450 CG PRO A 450 CD -0.226 REMARK 500 PRO A 459 CG PRO A 459 CD -0.227 REMARK 500 PRO A 462 CG PRO A 462 CD -0.226 REMARK 500 PRO A 466 CG PRO A 466 CD -0.227 REMARK 500 PRO A 469 CG PRO A 469 CD -0.226 REMARK 500 PRO A 470 N PRO A 470 CA 1.838 REMARK 500 PRO A 470 CG PRO A 470 CD -0.227 REMARK 500 PRO A 470 CD PRO A 470 N 0.411 REMARK 500 PRO A 477 CG PRO A 477 CD -0.226 REMARK 500 PRO A 493 CG PRO A 493 CD -0.226 REMARK 500 PRO A 507 CG PRO A 507 CD -0.227 REMARK 500 PRO A 513 CG PRO A 513 CD -0.227 REMARK 500 PRO A 540 CG PRO A 540 CD -0.226 REMARK 500 PRO A 547 CG PRO A 547 CD -0.227 REMARK 500 PRO A 565 CG PRO A 565 CD -0.226 REMARK 500 PRO A 575 CG PRO A 575 CD -0.227 REMARK 500 PRO A 586 CG PRO A 586 CD -0.227 REMARK 500 PRO A 617 CG PRO A 617 CD -0.227 REMARK 500 PRO A 651 CG PRO A 651 CD -0.226 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 18 N - CA - C ANGL. DEV. = 19.4 DEGREES REMARK 500 ARG A 18 C - N - CA ANGL. DEV. = 28.9 DEGREES REMARK 500 ARG A 18 CA - C - N ANGL. DEV. = 25.4 DEGREES REMARK 500 CYS A 19 C - N - CA ANGL. DEV. = 37.0 DEGREES REMARK 500 VAL A 123 C - N - CA ANGL. DEV. = 17.9 DEGREES REMARK 500 ASN A 129 N - CA - C ANGL. DEV. = 25.1 DEGREES REMARK 500 PHE A 130 O - C - N ANGL. DEV. =-42.2 DEGREES REMARK 500 GLU A 131 C - N - CA ANGL. DEV. =-47.7 DEGREES REMARK 500 LEU A 132 C - N - CA ANGL. DEV. = 20.8 DEGREES REMARK 500 ASN A 135 C - N - CA ANGL. DEV. = 24.9 DEGREES REMARK 500 ASN A 135 CA - C - N ANGL. DEV. = 18.4 DEGREES REMARK 500 PRO A 136 C - N - CA ANGL. DEV. = 18.7 DEGREES REMARK 500 CYS A 159 C - N - CA ANGL. DEV. = 21.4 DEGREES REMARK 500 ASP A 274 CA - C - N ANGL. DEV. = 32.2 DEGREES REMARK 500 ASP A 274 O - C - N ANGL. DEV. =-31.9 DEGREES REMARK 500 ALA A 275 C - N - CA ANGL. DEV. = 46.2 DEGREES REMARK 500 ALA A 275 CA - C - N ANGL. DEV. = 24.6 DEGREES REMARK 500 ALA A 275 O - C - N ANGL. DEV. =-46.4 DEGREES REMARK 500 GLN A 280 CA - C - O ANGL. DEV. =-40.4 DEGREES REMARK 500 ASN A 281 N - CA - C ANGL. DEV. = 19.3 DEGREES REMARK 500 GLN A 280 O - C - N ANGL. DEV. =-79.1 DEGREES REMARK 500 ASN A 281 C - N - CA ANGL. DEV. =-82.8 DEGREES REMARK 500 TYR A 383 C - N - CA ANGL. DEV. = 18.0 DEGREES REMARK 500 CYS A 419 C - N - CA ANGL. DEV. = 21.4 DEGREES REMARK 500 PRO A 470 CA - N - CD ANGL. DEV. =-62.0 DEGREES REMARK 500 PRO A 470 N - CD - CG ANGL. DEV. = 60.7 DEGREES REMARK 500 PRO A 470 C - N - CA ANGL. DEV. = 51.3 DEGREES REMARK 500 SER A 592 C - N - CA ANGL. DEV. = 22.8 DEGREES REMARK 500 ALA A 595 N - CA - C ANGL. DEV. = 22.7 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 32 124.16 65.54 REMARK 500 THR A 67 -37.64 75.54 REMARK 500 CYS A 159 -3.88 140.00 REMARK 500 SER A 169 -119.76 -170.28 REMARK 500 ASP A 191 -69.21 68.60 REMARK 500 ALA A 275 46.89 137.00 REMARK 500 ASP A 277 -45.10 46.20 REMARK 500 CYS A 278 -74.62 146.48 REMARK 500 PHE A 325 80.17 123.44 REMARK 500 SER A 336 -111.49 55.16 REMARK 500 ALA A 339 -169.58 91.19 REMARK 500 SER A 358 -81.45 32.25 REMARK 500 CYS A 366 -89.75 47.97 REMARK 500 LYS A 373 -30.75 72.47 REMARK 500 LEU A 377 -72.83 64.96 REMARK 500 CYS A 419 141.88 60.95 REMARK 500 VAL A 583 -60.10 57.53 REMARK 500 SER A 591 -118.74 89.55 REMARK 500 GLU A 593 6.34 125.05 REMARK 500 CYS A 657 -167.94 91.19 REMARK 500 SER A 659 -103.81 63.30 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 17 ARG A 18 -104.96 REMARK 500 ARG A 18 CYS A 19 -57.12 REMARK 500 CYS A 19 THR A 20 122.37 REMARK 500 PHE A 22 ASP A 23 -148.39 REMARK 500 ASP A 24 VAL A 25 136.83 REMARK 500 GLN A 26 ALA A 27 133.08 REMARK 500 PRO A 28 ASN A 29 -125.68 REMARK 500 SER A 36 MET A 37 144.98 REMARK 500 PRO A 43 ASP A 44 -128.34 REMARK 500 LEU A 58 PHE A 59 142.38 REMARK 500 GLY A 68 PHE A 69 149.23 REMARK 500 SER A 105 THR A 106 139.87 REMARK 500 VAL A 114 ILE A 115 138.62 REMARK 500 THR A 121 ASN A 122 -142.42 REMARK 500 ASN A 122 VAL A 123 135.50 REMARK 500 ARG A 126 ALA A 127 85.13 REMARK 500 ALA A 127 CYS A 128 -131.81 REMARK 500 PHE A 130 GLU A 131 -106.09 REMARK 500 GLU A 131 LEU A 132 141.87 REMARK 500 LEU A 132 CYS A 133 -83.65 REMARK 500 CYS A 133 ASP A 134 68.85 REMARK 500 ASP A 134 ASN A 135 144.30 REMARK 500 ASN A 135 PRO A 136 -40.73 REMARK 500 ALA A 139 VAL A 140 -129.91 REMARK 500 LYS A 142 PRO A 143 -146.08 REMARK 500 ASN A 155 ALA A 156 142.77 REMARK 500 CYS A 159 THR A 160 -139.15 REMARK 500 SER A 165 ASP A 166 146.26 REMARK 500 SER A 169 LEU A 170 -100.16 REMARK 500 GLY A 192 PHE A 193 -148.72 REMARK 500 VAL A 206 ARG A 207 134.67 REMARK 500 ASP A 208 LEU A 209 137.46 REMARK 500 PRO A 210 SER A 211 112.40 REMARK 500 ILE A 219 PHE A 220 -137.65 REMARK 500 GLY A 225 ILE A 226 139.25 REMARK 500 THR A 236 ALA A 237 149.30 REMARK 500 LYS A 258 PRO A 259 135.41 REMARK 500 THR A 273 ASP A 274 -112.97 REMARK 500 ALA A 275 VAL A 276 83.30 REMARK 500 ASP A 277 CYS A 278 -103.58 REMARK 500 GLU A 285 LEU A 286 -148.49 REMARK 500 SER A 310 GLY A 311 -149.61 REMARK 500 CYS A 323 PRO A 324 -65.13 REMARK 500 PRO A 324 PHE A 325 -113.67 REMARK 500 TYR A 367 GLY A 368 -147.64 REMARK 500 GLY A 368 VAL A 369 -147.10 REMARK 500 LEU A 377 CYS A 378 137.16 REMARK 500 SER A 380 ASN A 381 140.65 REMARK 500 ASN A 381 VAL A 382 -143.64 REMARK 500 ASN A 409 TYR A 410 -121.61 REMARK 500 TYR A 410 LYS A 411 -145.88 REMARK 500 LEU A 412 PRO A 413 119.97 REMARK 500 ASP A 415 PHE A 416 -148.94 REMARK 500 PHE A 416 MET A 417 -145.02 REMARK 500 VAL A 420 LEU A 421 140.04 REMARK 500 LEU A 421 ALA A 422 136.05 REMARK 500 ASN A 424 THR A 425 -145.64 REMARK 500 ARG A 444 HIS A 445 88.96 REMARK 500 THR A 468 PRO A 469 141.13 REMARK 500 ALA A 471 LEU A 472 -132.05 REMARK 500 ASN A 473 CYS A 474 -139.65 REMARK 500 TYR A 475 TRP A 476 147.32 REMARK 500 TYR A 494 ARG A 495 120.44 REMARK 500 ARG A 495 VAL A 496 149.49 REMARK 500 CYS A 511 GLY A 512 113.69 REMARK 500 PRO A 513 LYS A 514 147.05 REMARK 500 VAL A 525 ASN A 526 -143.64 REMARK 500 GLY A 531 LEU A 532 -146.29 REMARK 500 THR A 533 GLY A 534 -148.11 REMARK 500 THR A 539 PRO A 540 141.64 REMARK 500 GLU A 569 ILE A 570 149.26 REMARK 500 ILE A 570 LEU A 571 141.76 REMARK 500 LEU A 571 ASP A 572 113.71 REMARK 500 ASN A 589 ALA A 590 -135.20 REMARK 500 SER A 591 SER A 592 134.17 REMARK 500 SER A 592 GLU A 593 128.12 REMARK 500 ALA A 595 VAL A 596 -137.58 REMARK 500 LEU A 597 TYR A 598 -118.51 REMARK 500 ASN A 602 CYS A 603 -110.07 REMARK 500 THR A 604 ASP A 605 135.24 REMARK 500 THR A 616 PRO A 617 -148.01 REMARK 500 ALA A 618 TRP A 619 -105.36 REMARK 500 GLY A 625 ASN A 626 -148.38 REMARK 500 ALA A 633 GLY A 634 114.12 REMARK 500 ILE A 637 GLY A 638 138.39 REMARK 500 GLU A 647 CYS A 648 143.76 REMARK 500 ALA A 654 GLY A 655 149.11 REMARK 500 GLY A 655 ILE A 656 -131.47 REMARK 500 ILE A 656 CYS A 657 122.27 DBREF 1XJP A 17 680 UNP P59594 VGL2_CVHSA 17 680 DBREF 1XJP B 19 615 GB 11225609 NP_068576 19 615 SEQRES 1 A 664 ASP ARG CYS THR THR PHE ASP ASP VAL GLN ALA PRO ASN SEQRES 2 A 664 TYR THR GLN HIS THR SER SER MET ARG GLY VAL TYR TYR SEQRES 3 A 664 PRO ASP GLU ILE PHE ARG SER ASP THR LEU TYR LEU THR SEQRES 4 A 664 GLN ASP LEU PHE LEU PRO PHE TYR SER ASN VAL THR GLY SEQRES 5 A 664 PHE HIS THR ILE ASN HIS THR PHE GLY ASN PRO VAL ILE SEQRES 6 A 664 PRO PHE LYS ASP GLY ILE TYR PHE ALA ALA THR GLU LYS SEQRES 7 A 664 SER ASN VAL VAL ARG GLY TRP VAL PHE GLY SER THR MET SEQRES 8 A 664 ASN ASN LYS SER GLN SER VAL ILE ILE ILE ASN ASN SER SEQRES 9 A 664 THR ASN VAL VAL ILE ARG ALA CYS ASN PHE GLU LEU CYS SEQRES 10 A 664 ASP ASN PRO PHE PHE ALA VAL SER LYS PRO MET GLY THR SEQRES 11 A 664 GLN THR HIS THR MET ILE PHE ASP ASN ALA PHE ASN CYS SEQRES 12 A 664 THR PHE GLU TYR ILE SER ASP ALA PHE SER LEU ASP VAL SEQRES 13 A 664 SER GLU LYS SER GLY ASN PHE LYS HIS LEU ARG GLU PHE SEQRES 14 A 664 VAL PHE LYS ASN LYS ASP GLY PHE LEU TYR VAL TYR LYS SEQRES 15 A 664 GLY TYR GLN PRO ILE ASP VAL VAL ARG ASP LEU PRO SER SEQRES 16 A 664 GLY PHE ASN THR LEU LYS PRO ILE PHE LYS LEU PRO LEU SEQRES 17 A 664 GLY ILE ASN ILE THR ASN PHE ARG ALA ILE LEU THR ALA SEQRES 18 A 664 PHE SER PRO ALA GLN ASP ILE TRP GLY THR SER ALA ALA SEQRES 19 A 664 ALA TYR PHE VAL GLY TYR LEU LYS PRO THR THR PHE MET SEQRES 20 A 664 LEU LYS TYR ASP GLU ASN GLY THR ILE THR ASP ALA VAL SEQRES 21 A 664 ASP CYS SER GLN ASN PRO LEU ALA GLU LEU LYS CYS SER SEQRES 22 A 664 VAL LYS SER PHE GLU ILE ASP LYS GLY ILE TYR GLN THR SEQRES 23 A 664 SER ASN PHE ARG VAL VAL PRO SER GLY ASP VAL VAL ARG SEQRES 24 A 664 PHE PRO ASN ILE THR ASN LEU CYS PRO PHE GLY GLU VAL SEQRES 25 A 664 PHE ASN ALA THR LYS PHE PRO SER VAL TYR ALA TRP GLU SEQRES 26 A 664 ARG LYS LYS ILE SER ASN CYS VAL ALA ASP TYR SER VAL SEQRES 27 A 664 LEU TYR ASN SER THR PHE PHE SER THR PHE LYS CYS TYR SEQRES 28 A 664 GLY VAL SER ALA THR LYS LEU ASN ASP LEU CYS PHE SER SEQRES 29 A 664 ASN VAL TYR ALA ASP SER PHE VAL VAL LYS GLY ASP ASP SEQRES 30 A 664 VAL ARG GLN ILE ALA PRO GLY GLN THR GLY VAL ILE ALA SEQRES 31 A 664 ASP TYR ASN TYR LYS LEU PRO ASP ASP PHE MET GLY CYS SEQRES 32 A 664 VAL LEU ALA TRP ASN THR ARG ASN ILE ASP ALA THR SER SEQRES 33 A 664 THR GLY ASN TYR ASN TYR LYS TYR ARG TYR LEU ARG HIS SEQRES 34 A 664 GLY LYS LEU ARG PRO PHE GLU ARG ASP ILE SER ASN VAL SEQRES 35 A 664 PRO PHE SER PRO ASP GLY LYS PRO CYS THR PRO PRO ALA SEQRES 36 A 664 LEU ASN CYS TYR TRP PRO LEU ASN ASP TYR GLY PHE TYR SEQRES 37 A 664 THR THR THR GLY ILE GLY TYR GLN PRO TYR ARG VAL VAL SEQRES 38 A 664 VAL LEU SER PHE GLU LEU LEU ASN ALA PRO ALA THR VAL SEQRES 39 A 664 CYS GLY PRO LYS LEU SER THR ASP LEU ILE LYS ASN GLN SEQRES 40 A 664 CYS VAL ASN PHE ASN PHE ASN GLY LEU THR GLY THR GLY SEQRES 41 A 664 VAL LEU THR PRO SER SER LYS ARG PHE GLN PRO PHE GLN SEQRES 42 A 664 GLN PHE GLY ARG ASP VAL SER ASP PHE THR ASP SER VAL SEQRES 43 A 664 ARG ASP PRO LYS THR SER GLU ILE LEU ASP ILE SER PRO SEQRES 44 A 664 CYS SER PHE GLY GLY VAL SER VAL ILE THR PRO GLY THR SEQRES 45 A 664 ASN ALA SER SER GLU VAL ALA VAL LEU TYR GLN ASP VAL SEQRES 46 A 664 ASN CYS THR ASP VAL SER THR ALA ILE HIS ALA ASP GLN SEQRES 47 A 664 LEU THR PRO ALA TRP ARG ILE TYR SER THR GLY ASN ASN SEQRES 48 A 664 VAL PHE GLN THR GLN ALA GLY CYS LEU ILE GLY ALA GLU SEQRES 49 A 664 HIS VAL ASP THR SER TYR GLU CYS ASP ILE PRO ILE GLY SEQRES 50 A 664 ALA GLY ILE CYS ALA SER TYR HIS THR VAL SER LEU LEU SEQRES 51 A 664 ARG SER THR SER GLN LYS SER ILE VAL ALA TYR THR MET SEQRES 52 A 664 SER SEQRES 1 B 597 SER THR ILE GLU GLU GLN ALA LYS THR PHE LEU ASP LYS SEQRES 2 B 597 PHE ASN HIS GLU ALA GLU ASP LEU PHE TYR GLN SER SER SEQRES 3 B 597 LEU ALA SER TRP ASN TYR ASN THR ASN ILE THR GLU GLU SEQRES 4 B 597 ASN VAL GLN ASN MET ASN ASN ALA GLY ASP LYS TRP SER SEQRES 5 B 597 ALA PHE LEU LYS GLU GLN SER THR LEU ALA GLN MET TYR SEQRES 6 B 597 PRO LEU GLN GLU ILE GLN ASN LEU THR VAL LYS LEU GLN SEQRES 7 B 597 LEU GLN ALA LEU GLN GLN ASN GLY SER SER VAL LEU SER SEQRES 8 B 597 GLU ASP LYS SER LYS ARG LEU ASN THR ILE LEU ASN THR SEQRES 9 B 597 MET SER THR ILE TYR SER THR GLY LYS VAL CYS ASN PRO SEQRES 10 B 597 ASP ASN PRO GLN GLU CYS LEU LEU LEU GLU PRO GLY LEU SEQRES 11 B 597 ASN GLU ILE MET ALA ASN SER LEU ASP TYR ASN GLU ARG SEQRES 12 B 597 LEU TRP ALA TRP GLU SER TRP ARG SER GLU VAL GLY LYS SEQRES 13 B 597 GLN LEU ARG PRO LEU TYR GLU GLU TYR VAL VAL LEU LYS SEQRES 14 B 597 ASN GLU MET ALA ARG ALA ASN HIS TYR GLU ASP TYR GLY SEQRES 15 B 597 ASP TYR TRP ARG GLY ASP TYR GLU VAL ASN GLY VAL ASP SEQRES 16 B 597 GLY TYR ASP TYR SER ARG GLY GLN LEU ILE GLU ASP VAL SEQRES 17 B 597 GLU HIS THR PHE GLU GLU ILE LYS PRO LEU TYR GLU HIS SEQRES 18 B 597 LEU HIS ALA TYR VAL ARG ALA LYS LEU MET ASN ALA TYR SEQRES 19 B 597 PRO SER TYR ILE SER PRO ILE GLY CYS LEU PRO ALA HIS SEQRES 20 B 597 LEU LEU GLY ASP MET TRP GLY ARG PHE TRP THR ASN LEU SEQRES 21 B 597 TYR SER LEU THR VAL PRO PHE GLY GLN LYS PRO ASN ILE SEQRES 22 B 597 ASP VAL THR ASP ALA MET VAL ASP GLN ALA TRP ASP ALA SEQRES 23 B 597 GLN ARG ILE PHE LYS GLU ALA GLU LYS PHE PHE VAL SER SEQRES 24 B 597 VAL GLY LEU PRO ASN MET THR GLN GLY PHE TRP GLU ASN SEQRES 25 B 597 SER MET LEU THR ASP PRO GLY ASN VAL GLN LYS ALA VAL SEQRES 26 B 597 CYS HIS PRO THR ALA TRP ASP LEU GLY LYS GLY ASP PHE SEQRES 27 B 597 ARG ILE LEU MET CYS THR LYS VAL THR MET ASP ASP PHE SEQRES 28 B 597 LEU THR ALA HIS HIS GLU MET GLY HIS ILE GLN TYR ASP SEQRES 29 B 597 MET ALA TYR ALA ALA GLN PRO PHE LEU LEU ARG ASN GLY SEQRES 30 B 597 ALA ASN GLU GLY PHE HIS GLU ALA VAL GLY GLU ILE MET SEQRES 31 B 597 SER LEU SER ALA ALA THR PRO LYS HIS LEU LYS SER ILE SEQRES 32 B 597 GLY LEU LEU SER PRO ASP PHE GLN GLU ASP ASN GLU THR SEQRES 33 B 597 GLU ILE ASN PHE LEU LEU LYS GLN ALA LEU THR ILE VAL SEQRES 34 B 597 GLY THR LEU PRO PHE THR TYR MET LEU GLU LYS TRP ARG SEQRES 35 B 597 TRP MET VAL PHE LYS GLY GLU ILE PRO LYS ASP GLN TRP SEQRES 36 B 597 MET LYS LYS TRP TRP GLU MET LYS ARG GLU ILE VAL GLY SEQRES 37 B 597 VAL VAL GLU PRO VAL PRO HIS ASP GLU THR TYR CYS ASP SEQRES 38 B 597 PRO ALA SER LEU PHE HIS VAL SER ASN ASP TYR SER PHE SEQRES 39 B 597 ILE ARG TYR TYR THR ARG THR LEU TYR GLN PHE GLN PHE SEQRES 40 B 597 GLN GLU ALA LEU CYS GLN ALA ALA LYS HIS GLU GLY PRO SEQRES 41 B 597 LEU HIS LYS CYS ASP ILE SER ASN SER THR GLU ALA GLY SEQRES 42 B 597 GLN LYS LEU PHE ASN MET LEU ARG LEU GLY LYS SER GLU SEQRES 43 B 597 PRO TRP THR LEU ALA LEU GLU ASN VAL VAL GLY ALA LYS SEQRES 44 B 597 ASN MET ASN VAL ARG PRO LEU LEU ASN TYR PHE GLU PRO SEQRES 45 B 597 LEU PHE THR TRP LEU LYS ASP GLN ASN LYS ASN SER PHE SEQRES 46 B 597 VAL GLY TRP SER THR ASP TRP SER PRO TYR ALA ASP HELIX 1 1 PHE A 69 ASN A 78 1 10 HELIX 2 2 PRO A 79 ILE A 87 1 9 HELIX 3 3 ILE A 87 SER A 95 1 9 HELIX 4 4 VAL A 97 SER A 105 1 9 HELIX 5 5 ASP A 208 PHE A 213 1 6 HELIX 6 6 ALA A 241 TRP A 245 5 5 HELIX 7 7 ALA A 250 VAL A 254 5 5 HELIX 8 8 LEU A 257 TYR A 266 1 10 HELIX 9 9 LYS A 291 ILE A 295 5 5 HELIX 10 10 GLY A 311 CYS A 323 1 13 HELIX 11 11 VAL A 354 SER A 358 5 5 HELIX 12 12 VAL A 369 LYS A 373 5 5 HELIX 13 13 GLY A 391 ARG A 395 5 5 HELIX 14 14 LYS A 447 GLU A 452 1 6 HELIX 15 15 VAL A 497 ASN A 505 1 9 HELIX 16 16 GLY A 534 SER A 542 1 9 HELIX 17 17 GLN A 549 ASP A 564 1 16 HELIX 18 18 ASN A 589 VAL A 594 1 6 HELIX 19 19 CYS A 603 THR A 608 1 6 HELIX 20 20 ALA A 639 THR A 644 1 6 HELIX 21 21 CYS A 648 ILE A 656 1 9 HELIX 22 22 TYR A 660 GLN A 671 1 12 HELIX 23 23 GLN A 671 SER A 680 1 10 HELIX 24 24 GLU B 22 ASN B 53 1 32 HELIX 25 25 THR B 55 THR B 78 1 24 HELIX 26 26 ASN B 90 GLN B 101 1 12 HELIX 27 27 ASN B 103 LEU B 108 5 6 HELIX 28 28 SER B 109 GLY B 130 1 22 HELIX 29 29 GLY B 147 SER B 155 1 9 HELIX 30 30 ASP B 157 VAL B 172 1 16 HELIX 31 31 VAL B 172 ASN B 194 1 23 HELIX 32 32 ASP B 198 GLY B 205 1 8 HELIX 33 33 ARG B 219 TYR B 252 1 34 HELIX 34 34 HIS B 265 LEU B 267 5 3 HELIX 35 35 TRP B 275 ASN B 277 5 3 HELIX 36 36 LEU B 278 VAL B 283 1 6 HELIX 37 37 MET B 297 ALA B 301 5 5 HELIX 38 38 ASP B 303 SER B 317 1 15 HELIX 39 39 GLY B 326 SER B 331 1 6 HELIX 40 40 THR B 365 TYR B 385 1 21 HELIX 41 41 PRO B 389 ARG B 393 5 5 HELIX 42 42 GLY B 399 THR B 414 1 16 HELIX 43 43 THR B 414 ILE B 421 1 8 HELIX 44 44 ASP B 431 VAL B 447 1 17 HELIX 45 45 GLY B 448 GLY B 466 1 19 HELIX 46 46 PRO B 469 ASP B 471 5 3 HELIX 47 47 GLN B 472 ILE B 484 1 13 HELIX 48 48 CYS B 498 SER B 502 5 5 HELIX 49 49 LEU B 503 ASN B 508 1 6 HELIX 50 50 ILE B 513 ALA B 532 1 20 HELIX 51 51 PRO B 538 CYS B 542 5 5 HELIX 52 52 SER B 547 ARG B 559 1 13 HELIX 53 53 PRO B 565 GLY B 575 1 11 HELIX 54 54 VAL B 581 ASN B 599 1 19 SHEET 1 A 2 THR A 431 SER A 432 0 SHEET 2 A 2 ILE A 621 TYR A 622 1 O ILE A 621 N SER A 432 SHEET 1 B 2 LYS B 131 ASN B 134 0 SHEET 2 B 2 ASN B 137 LEU B 143 -1 O LEU B 142 N VAL B 132 SHEET 1 C 2 LEU B 262 PRO B 263 0 SHEET 2 C 2 VAL B 487 VAL B 488 1 O VAL B 488 N LEU B 262 SHEET 1 D 2 THR B 347 GLY B 352 0 SHEET 2 D 2 ASP B 355 LEU B 359 -1 O ARG B 357 N TRP B 349 SSBOND 1 CYS A 133 CYS A 467 SSBOND 2 CYS A 159 CYS A 288 SSBOND 3 CYS A 278 CYS A 474 SSBOND 4 CYS A 323 CYS A 657 SSBOND 5 CYS A 348 CYS A 511 SSBOND 6 CYS A 366 CYS A 378 SSBOND 7 CYS A 419 CYS A 603 SSBOND 8 CYS A 524 CYS A 576 SSBOND 9 CYS B 133 CYS B 141 SSBOND 10 CYS B 344 CYS B 361 SSBOND 11 CYS B 530 CYS B 542 CISPEP 1 ASP A 274 ALA A 275 0 12.45 CISPEP 2 GLU B 145 PRO B 146 0 -0.18 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000