PDB Short entry for 1Y5P
HEADER    TOXIN/SIGNALING PROTEIN                 02-DEC-04   1Y5P              
TITLE     PREDICTED STRUCTURE OF AN ALPHA SHORT CHAIN NEUROTOXIN FROM           
TITLE    2 COBRA NAJA NAJA BOUND WITH ACETYLCHOLINE RECEPTOR PEPTIDE            
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: WEAK NEUROTOXIN 8;                                         
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: ALPHA NEUROTOXIN;                                           
COMPND   5 MOL_ID: 2;                                                           
COMPND   6 MOLECULE: 6-MER PEPTIDE FROM ACETYLCHOLINE RECEPTOR                  
COMPND   7 PROTEIN, ALPHA CHAIN;                                                
COMPND   8 CHAIN: B                                                             
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: NAJA NAJA;                                      
SOURCE   3 ORGANISM_COMMON: INDIAN COBRA;                                       
SOURCE   4 MOL_ID: 2;                                                           
SOURCE   5 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   6 ORGANISM_COMMON: HUMAN                                               
KEYWDS    ALPHA SHORT CHAIN NEUROTOXIN, HOMOLOGY MODEL, COMPARATIVE             
KEYWDS   2 MODELING                                                             
EXPDTA    THEORETICAL MODEL                                                     
AUTHOR    A.BANO,A.SALIM,A.ABBASI,Z.H.ZAIDI                                     
REVDAT   1   21-DEC-04 1Y5P    0                                                
JRNL        AUTH   A.BANO,A.SALIM,A.ABBASI,Z.H.ZAIDI                            
JRNL        TITL   PREDICTION OF THE BINDING SITES IN ALPHA                     
JRNL        TITL 2 NEUROTOXINS FROM SOME ELAPIDEA SNAKES: A MOLECULAR           
JRNL        TITL 3 MODELING ANALYSIS OF THE SUBSEQUENT EFFECT OF                
JRNL        TITL 4 BINDING ON THE STRUCTURE OF NEUROTOXINS                      
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   1                                                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : MODELLER 4                                           
REMARK   3   AUTHORS     : SALI, A                                              
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1Y5P COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998                       
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-DEC-2004.                
REMARK 100 THE RCSB ID CODE IS RCSB031148.                                      
REMARK 220                                                                      
REMARK 220 EXPERIMENTAL DETAILS                                                 
REMARK 220  EXPERIMENT TYPE                : THEORETICAL MODELLING              
REMARK 220                                                                      
REMARK 220 REMARK: HOMOLOGY MODEL WAS BUILT USING THE CRYSTAL STRUCTURE         
REMARK 220         COORDINATES OF 1CTX, 1KBA AND 1ABT                           
REMARK 225                                                                      
REMARK 225 THEORETICAL MODEL                                                    
REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE.           
REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND                
REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE                   
REMARK 225 RECORDS ARE MEANINGLESS.                                             
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1LN7   RELATED DB: PDB                                   
REMARK 900 ALPHA NEUROTOXIN AND ACH RECEPTOR COMPLEX                            
REMARK 900 RELATED ID: 1LN9   RELATED DB: PDB                                   
REMARK 900 ALPHA NEUROTOXIN AND ACH RECEPTOR COMPLEX                            
REMARK 900 RELATED ID: 1LQ3   RELATED DB: PDB                                   
REMARK 900 ALPHA NEUROTOXIN AND ACH RECEPTOR COMPLEX                            
REMARK 900 RELATED ID: 1XVZ   RELATED DB: PDB                                   
REMARK 900 WEAK NEUROTOXIN 5                                                    
REMARK 900 RELATED ID: 1XW0   RELATED DB: PDB                                   
REMARK 900 WEAK NEUROTOXIN 6                                                    
REMARK 900 RELATED ID: 1XW1   RELATED DB: PDB                                   
REMARK 900 WEAK NEUROTOXIN 7                                                    
REMARK 900 RELATED ID: 1Y5Q   RELATED DB: PDB                                   
REMARK 900 ALPHA SHORT CHAIN NEUROTOXIN                                         
REMARK 900 RELATED ID: 1Y5S   RELATED DB: PDB                                   
REMARK 900 ALPHA NEUROTOXIN FROM TAIWAN COBRA                                   
REMARK 900 RELATED ID: 1Y5T   RELATED DB: PDB                                   
REMARK 900 ALPHA NEUROTOXIN FROM TAIWAN COBRA BOUND WITH ACETYLCHOLINE          
REMARK 900 RECEPTOR PEPTIDE                                                     
DBREF  1Y5P A    1    65  UNP    P29182   TXW8_NAJNA       1     65             
DBREF  1Y5P B  229   234  UNP    P02708   ACHA_HUMAN     230    235             
SEQRES   1 A   65  LEU THR CYS LEU ASN CYS PRO GLU VAL TYR CYS ARG ARG          
SEQRES   2 A   65  PHE GLN LYS CYS ARG ASN GLY GLU LYS ILE CYS PHE LYS          
SEQRES   3 A   65  LYS PHE ASP GLN ARG ASN LEU LEU GLY LYS ARG TYR GLU          
SEQRES   4 A   65  ILE GLY CYS ALA ALA THR CYS PRO GLU ALA LYS PRO ARG          
SEQRES   5 A   65  GLU ILE VAL GLN CYS CYS SER THR ASP LYS CYS ASN ARG          
SEQRES   1 B    6  LYS HIS SER VAL THR TYR                                      
SHEET    1   A 2 THR A   2  ASN A   5  0                                        
SHEET    2   A 2 ARG A  13  LYS A  16 -1  O  ARG A  13   N  ASN A   5           
SHEET    1   B 3 LYS A  36  ALA A  43  0                                        
SHEET    2   B 3 ILE A  23  GLN A  30 -1  N  ASP A  29   O  ARG A  37           
SHEET    3   B 3 VAL A  55  CYS A  58 -1  O  GLN A  56   N  LYS A  26           
SSBOND   1 CYS A    3    CYS A   24                                             
SSBOND   2 CYS A   17    CYS A   42                                             
SSBOND   3 CYS A   46    CYS A   57                                             
SSBOND   4 CYS A   58    CYS A   63                                             
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000