PDB Short entry for 1YFJ HEADER TRANSFERASE/DNA 02-JAN-05 1YFJ TITLE T4DAM IN COMPLEX WITH ADOHCY AND 15-MER OLIGONUCLEOTIDE SHOWING SEMI- TITLE 2 SPECIFIC AND SPECIFIC CONTACT COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*TP*CP*AP*CP*AP*GP*GP*AP*TP*CP*CP*TP*GP*TP*G)-3'; COMPND 3 CHAIN: 1, 2, 3, 4, 5, 6, 7, 8, 9, 0; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA ADENINE METHYLASE; COMPND 7 CHAIN: A, B, C, D, E, F; COMPND 8 SYNONYM: DEOXYADENOSYL-METHYLTRANSFERASE, M.ECOT4DAM; COMPND 9 EC: 2.1.1.72; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: SYNTHESIZED BY NEW ENGLAND BIOLABS; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4; SOURCE 6 ORGANISM_TAXID: 10665; SOURCE 7 GENE: DAM; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: GM 2971; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PJW2 KEYWDS T4DAM, METHYLTRANSFERASE, DNA, PROTEIN-DNA COMPLEX, TRANSFERASE-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.R.HORTON,K.LIEBERT,S.HATTMAN,A.JELTSCH,X.CHENG REVDAT 5 23-AUG-23 1YFJ 1 REMARK LINK REVDAT 4 31-JAN-18 1YFJ 1 JRNL REVDAT 3 11-OCT-17 1YFJ 1 REMARK REVDAT 2 24-FEB-09 1YFJ 1 VERSN REVDAT 1 17-MAY-05 1YFJ 0 JRNL AUTH J.R.HORTON,K.LIEBERT,S.HATTMAN,A.JELTSCH,X.CHENG JRNL TITL TRANSITION FROM NONSPECIFIC TO SPECIFIC DNA INTERACTIONS JRNL TITL 2 ALONG THE SUBSTRATE-RECOGNITION PATHWAY OF DAM JRNL TITL 3 METHYLTRANSFERASE. JRNL REF CELL(CAMBRIDGE,MASS.) V. 121 349 2005 JRNL REFN ISSN 0092-8674 JRNL PMID 15882618 JRNL DOI 10.1016/J.CELL.2005.02.021 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Z.YANG,J.R.HORTON,L.ZHOU,X.J.ZHANG,A.DONG,X.ZHANG, REMARK 1 AUTH 2 S.L.SCHLAGMAN,V.KOSSYKH,X.CHENG REMARK 1 TITL STRUCTURE OF THE BACTERIOPHAGE T4 DNA ADENINE REMARK 1 TITL 2 METHYLTRANSFERASE REMARK 1 REF NAT.STRUCT.MOL.BIOL. V. 10 849 2003 REMARK 1 REFN ISSN 1545-9993 REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 76093 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3860 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.69 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.79 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 352 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.018 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11493 REMARK 3 NUCLEIC ACID ATOMS : 3010 REMARK 3 HETEROGEN ATOMS : 162 REMARK 3 SOLVENT ATOMS : 343 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.87000 REMARK 3 B22 (A**2) : 11.66000 REMARK 3 B33 (A**2) : -9.78000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM SIGMAA (A) : 0.21 REMARK 3 LOW RESOLUTION CUTOFF (A) : 35.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.41 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 2.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ANISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YFJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-05. REMARK 100 THE DEPOSITION ID IS D_1000031457. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-03 REMARK 200 TEMPERATURE (KELVIN) : 173 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78518 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.690 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 7.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: GLRF REMARK 200 STARTING MODEL: 1Q0S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, MES, AMMONIUM ACETATE, REMARK 280 CACL2, AND ETHYLENEGLYCOL, PH 6.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 55.60000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.60000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 66.50000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 94.60000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 55.60000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 66.50000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: 7, 8, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: 3, 4, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: 5, 6, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: 9, 0, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DT 5 501 REMARK 465 HIS D 245 REMARK 465 SER D 246 REMARK 465 LYS D 247 REMARK 465 GLU D 248 REMARK 465 LYS D 249 REMARK 465 ASN E 236 REMARK 465 LYS E 237 REMARK 465 LYS E 238 REMARK 465 TYR E 239 REMARK 465 VAL E 240 REMARK 465 PHE E 241 REMARK 465 ASN E 242 REMARK 465 ILE E 243 REMARK 465 TYR E 244 REMARK 465 HIS E 245 REMARK 465 SER E 246 REMARK 465 LYS E 247 REMARK 465 GLU E 248 REMARK 465 LYS E 249 REMARK 465 ASN E 250 REMARK 465 GLY E 251 REMARK 465 ASN F 236 REMARK 465 LYS F 237 REMARK 465 LYS F 238 REMARK 465 TYR F 239 REMARK 465 VAL F 240 REMARK 465 PHE F 241 REMARK 465 ASN F 242 REMARK 465 ILE F 243 REMARK 465 TYR F 244 REMARK 465 HIS F 245 REMARK 465 SER F 246 REMARK 465 LYS F 247 REMARK 465 GLU F 248 REMARK 465 LYS F 249 REMARK 465 ASN F 250 REMARK 465 GLY F 251 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DC 5 502 P OP1 OP2 REMARK 470 DG 6 615 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DG 6 615 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG 6 615 C2 N2 N3 C4 REMARK 470 LYS A 24 CG CD CE NZ REMARK 470 LYS A 72 CG CD CE NZ REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 ASP A 119 CG OD1 OD2 REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 LYS A 191 CG CD CE NZ REMARK 470 LYS A 237 CG CD CE NZ REMARK 470 PHE A 241 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 246 OG REMARK 470 GLU A 248 CG CD OE1 OE2 REMARK 470 LYS A 249 CG CD CE NZ REMARK 470 ASN A 250 CG OD1 ND2 REMARK 470 LYS B 24 CG CD CE NZ REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 ASP B 119 CG OD1 OD2 REMARK 470 LYS B 134 CG CD CE NZ REMARK 470 LYS B 191 CG CD CE NZ REMARK 470 LYS B 237 CG CD CE NZ REMARK 470 SER B 246 OG REMARK 470 LYS B 247 CG CD CE NZ REMARK 470 GLU B 248 CB CG CD OE1 OE2 REMARK 470 LYS B 249 CB CG CD CE NZ REMARK 470 ASN B 250 CG OD1 ND2 REMARK 470 GLU C 17 CG CD OE1 OE2 REMARK 470 LYS C 72 CG CD CE NZ REMARK 470 LYS C 89 CG CD CE NZ REMARK 470 GLU C 92 CG CD OE1 OE2 REMARK 470 LYS C 96 CG CD CE NZ REMARK 470 LYS C 134 CB CG CD CE NZ REMARK 470 GLU C 187 CG CD OE1 OE2 REMARK 470 LYS C 191 CG CD CE NZ REMARK 470 LYS C 218 CG CD CE NZ REMARK 470 LYS C 238 CG CD CE NZ REMARK 470 ILE C 243 CG1 CG2 CD1 REMARK 470 SER C 246 OG REMARK 470 LYS C 247 CG CD CE NZ REMARK 470 GLU C 248 CB CG CD OE1 OE2 REMARK 470 LYS C 249 CB CG CD CE NZ REMARK 470 ASN C 250 CG OD1 ND2 REMARK 470 LYS D 24 CG CD CE NZ REMARK 470 LYS D 72 CG CD CE NZ REMARK 470 LYS D 75 CG CD CE NZ REMARK 470 LYS D 78 CG CD CE NZ REMARK 470 GLU D 85 CG CD OE1 OE2 REMARK 470 LYS D 89 CG CD CE NZ REMARK 470 GLU D 92 CG CD OE1 OE2 REMARK 470 LYS D 96 CG CD CE NZ REMARK 470 ASP D 119 CG OD1 OD2 REMARK 470 LYS D 120 CG CD CE NZ REMARK 470 LYS D 129 CG CD CE NZ REMARK 470 LYS D 134 CB CG CD CE NZ REMARK 470 LYS D 138 CG CD CE NZ REMARK 470 LYS D 158 CG CD CE NZ REMARK 470 LYS D 161 CG CD CE NZ REMARK 470 LEU D 175 CG CD1 CD2 REMARK 470 GLU D 187 CG CD OE1 OE2 REMARK 470 LYS D 191 CG CD CE NZ REMARK 470 LYS D 218 CG CD CE NZ REMARK 470 GLU D 219 CG CD OE1 OE2 REMARK 470 LEU D 222 CG CD1 CD2 REMARK 470 LYS D 224 CG CD CE NZ REMARK 470 LYS D 228 CG CD CE NZ REMARK 470 LYS D 237 CG CD CE NZ REMARK 470 LYS D 238 CG CD CE NZ REMARK 470 TYR D 239 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL D 240 CG1 CG2 REMARK 470 PHE D 241 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN D 242 CG OD1 ND2 REMARK 470 ILE D 243 CG1 CG2 CD1 REMARK 470 TYR D 244 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN D 250 CG OD1 ND2 REMARK 470 LEU E 15 CG CD1 CD2 REMARK 470 GLU E 17 CG CD OE1 OE2 REMARK 470 LYS E 19 CG CD CE NZ REMARK 470 SER E 20 OG REMARK 470 LYS E 24 CG CD CE NZ REMARK 470 LYS E 72 CG CD CE NZ REMARK 470 LYS E 75 CG CD CE NZ REMARK 470 GLN E 76 CG CD OE1 NE2 REMARK 470 LYS E 81 CG CD CE NZ REMARK 470 LYS E 84 CG CD CE NZ REMARK 470 GLU E 85 CG CD OE1 OE2 REMARK 470 GLU E 92 CG CD OE1 OE2 REMARK 470 LYS E 96 CG CD CE NZ REMARK 470 LYS E 120 CG CD CE NZ REMARK 470 LYS E 129 CG CD CE NZ REMARK 470 LYS E 134 CB CG CD CE NZ REMARK 470 LYS E 158 CG CD CE NZ REMARK 470 LYS E 161 CG CD CE NZ REMARK 470 LEU E 163 CG CD1 CD2 REMARK 470 LEU E 175 CG CD1 CD2 REMARK 470 ILE E 176 CG1 CG2 CD1 REMARK 470 THR E 177 OG1 CG2 REMARK 470 VAL E 178 CG1 CG2 REMARK 470 GLU E 187 CG CD OE1 OE2 REMARK 470 ASP E 188 CG OD1 OD2 REMARK 470 GLU E 190 CG CD OE1 OE2 REMARK 470 LYS E 191 CG CD CE NZ REMARK 470 SER E 199 OG REMARK 470 ARG E 203 CG CD NE CZ NH1 NH2 REMARK 470 LYS E 206 CG CD CE NZ REMARK 470 VAL E 212 CG1 CG2 REMARK 470 LEU E 213 CG CD1 CD2 REMARK 470 GLU E 214 CG CD OE1 OE2 REMARK 470 HIS E 215 CG ND1 CD2 CE1 NE2 REMARK 470 HIS E 216 CG ND1 CD2 CE1 NE2 REMARK 470 LYS E 218 CG CD CE NZ REMARK 470 GLU E 219 CG CD OE1 OE2 REMARK 470 ASN E 220 CG OD1 ND2 REMARK 470 THR E 221 OG1 CG2 REMARK 470 LEU E 222 CG CD1 CD2 REMARK 470 LEU E 223 CG CD1 CD2 REMARK 470 LYS E 224 CG CD CE NZ REMARK 470 GLU E 225 CG CD OE1 OE2 REMARK 470 SER E 227 OG REMARK 470 LYS E 228 CG CD CE NZ REMARK 470 LYS E 229 CG CD CE NZ REMARK 470 LYS E 233 CG CD CE NZ REMARK 470 LEU E 235 CG CD1 CD2 REMARK 470 THR E 252 OG1 CG2 REMARK 470 ASP E 253 CG OD1 OD2 REMARK 470 GLU E 254 CG CD OE1 OE2 REMARK 470 VAL E 255 CG1 CG2 REMARK 470 MET F 1 CG SD CE REMARK 470 LEU F 2 CG CD1 CD2 REMARK 470 ILE F 5 CG1 CG2 CD1 REMARK 470 THR F 8 OG1 CG2 REMARK 470 LYS F 11 CG CD CE NZ REMARK 470 SER F 13 OG REMARK 470 LEU F 14 CG CD1 CD2 REMARK 470 LEU F 15 CG CD1 CD2 REMARK 470 GLU F 17 CG CD OE1 OE2 REMARK 470 LEU F 18 CG CD1 CD2 REMARK 470 LYS F 19 CG CD CE NZ REMARK 470 SER F 20 OG REMARK 470 HIS F 21 CG ND1 CD2 CE1 NE2 REMARK 470 PHE F 22 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS F 24 CG CD CE NZ REMARK 470 TYR F 25 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN F 26 CG OD1 ND2 REMARK 470 ARG F 27 CG CD NE CZ NH1 NH2 REMARK 470 PHE F 28 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL F 29 CG1 CG2 REMARK 470 LEU F 31 CG CD1 CD2 REMARK 470 CYS F 33 SG REMARK 470 LEU F 36 CG CD1 CD2 REMARK 470 SER F 37 OG REMARK 470 VAL F 38 CG1 CG2 REMARK 470 LEU F 40 CG CD1 CD2 REMARK 470 VAL F 42 CG1 CG2 REMARK 470 ASN F 43 CG OD1 ND2 REMARK 470 VAL F 46 CG1 CG2 REMARK 470 LEU F 47 CG CD1 CD2 REMARK 470 ASP F 50 CG OD1 OD2 REMARK 470 ILE F 51 CG1 CG2 CD1 REMARK 470 GLN F 52 CG CD OE1 NE2 REMARK 470 GLU F 53 CG CD OE1 OE2 REMARK 470 ILE F 55 CG1 CG2 CD1 REMARK 470 ILE F 56 CG1 CG2 CD1 REMARK 470 GLU F 57 CG CD OE1 OE2 REMARK 470 MET F 58 CG SD CE REMARK 470 TYR F 59 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS F 60 CG CD CE NZ REMARK 470 ARG F 61 CG CD NE CZ NH1 NH2 REMARK 470 LEU F 62 CG CD1 CD2 REMARK 470 ILE F 63 CG1 CG2 CD1 REMARK 470 ASN F 64 CG OD1 ND2 REMARK 470 VAL F 65 CG1 CG2 REMARK 470 SER F 66 OG REMARK 470 TRP F 67 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP F 67 CZ3 CH2 REMARK 470 ASP F 68 CG OD1 OD2 REMARK 470 ASP F 69 CG OD1 OD2 REMARK 470 VAL F 70 CG1 CG2 REMARK 470 LEU F 71 CG CD1 CD2 REMARK 470 LYS F 72 CG CD CE NZ REMARK 470 VAL F 73 CG1 CG2 REMARK 470 ILE F 74 CG1 CG2 CD1 REMARK 470 LYS F 75 CG CD CE NZ REMARK 470 GLN F 76 CG CD OE1 NE2 REMARK 470 TYR F 77 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS F 78 CG CD CE NZ REMARK 470 LEU F 79 CG CD1 CD2 REMARK 470 SER F 80 OG REMARK 470 LYS F 81 CG CD CE NZ REMARK 470 THR F 82 OG1 CG2 REMARK 470 SER F 83 OG REMARK 470 LYS F 84 CG CD CE NZ REMARK 470 GLU F 85 CG CD OE1 OE2 REMARK 470 GLU F 86 CG CD OE1 OE2 REMARK 470 LEU F 88 CG CD1 CD2 REMARK 470 LYS F 89 CG CD CE NZ REMARK 470 LEU F 90 CG CD1 CD2 REMARK 470 GLU F 92 CG CD OE1 OE2 REMARK 470 TYR F 94 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS F 96 CG CD CE NZ REMARK 470 THR F 97 OG1 CG2 REMARK 470 ASP F 99 CG OD1 OD2 REMARK 470 LEU F 101 CG CD1 CD2 REMARK 470 LEU F 102 CG CD1 CD2 REMARK 470 LEU F 103 CG CD1 CD2 REMARK 470 TYR F 104 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL F 105 CG1 CG2 REMARK 470 LEU F 106 CG CD1 CD2 REMARK 470 PHE F 108 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE F 115 CG1 CG2 CD1 REMARK 470 ILE F 117 CG1 CG2 CD1 REMARK 470 ASP F 119 CG OD1 OD2 REMARK 470 LYS F 120 CG CD CE NZ REMARK 470 ASN F 122 CG OD1 ND2 REMARK 470 PHE F 123 CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR F 124 OG1 CG2 REMARK 470 LYS F 129 CG CD CE NZ REMARK 470 THR F 131 OG1 CG2 REMARK 470 ILE F 132 CG1 CG2 CD1 REMARK 470 LYS F 134 CB CG CD CE NZ REMARK 470 ASN F 135 CG OD1 ND2 REMARK 470 SER F 136 OG REMARK 470 GLU F 137 CG CD OE1 OE2 REMARK 470 LYS F 138 CG CD CE NZ REMARK 470 PHE F 140 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE F 143 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS F 144 CG CD CE NZ REMARK 470 GLN F 145 CG CD OE1 NE2 REMARK 470 ASN F 146 CG OD1 ND2 REMARK 470 CYS F 147 SG REMARK 470 ASP F 148 CG OD1 OD2 REMARK 470 LYS F 149 CG CD CE NZ REMARK 470 ILE F 150 CG1 CG2 CD1 REMARK 470 ILE F 151 CG1 CG2 CD1 REMARK 470 PHE F 152 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER F 153 OG REMARK 470 SER F 154 OG REMARK 470 LEU F 155 CG CD1 CD2 REMARK 470 HIS F 156 CG ND1 CD2 CE1 NE2 REMARK 470 PHE F 157 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS F 158 CG CD CE NZ REMARK 470 ASP F 159 CG OD1 OD2 REMARK 470 VAL F 160 CG1 CG2 REMARK 470 LYS F 161 CG CD CE NZ REMARK 470 ILE F 162 CG1 CG2 CD1 REMARK 470 LEU F 163 CG CD1 CD2 REMARK 470 ASP F 164 CG OD1 OD2 REMARK 470 ASP F 166 CG OD1 OD2 REMARK 470 PHE F 167 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL F 168 CG1 CG2 REMARK 470 TYR F 169 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL F 170 CG1 CG2 REMARK 470 LEU F 175 CG CD1 CD2 REMARK 470 ILE F 176 CG1 CG2 CD1 REMARK 470 THR F 177 OG1 CG2 REMARK 470 VAL F 178 CG1 CG2 REMARK 470 ASN F 182 CG OD1 ND2 REMARK 470 LYS F 183 CG CD CE NZ REMARK 470 PHE F 184 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TRP F 185 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP F 185 CZ3 CH2 REMARK 470 SER F 186 OG REMARK 470 GLU F 187 CG CD OE1 OE2 REMARK 470 ASP F 188 CG OD1 OD2 REMARK 470 GLU F 189 CG CD OE1 OE2 REMARK 470 GLU F 190 CG CD OE1 OE2 REMARK 470 LYS F 191 CG CD CE NZ REMARK 470 ASP F 192 CG OD1 OD2 REMARK 470 LEU F 193 CG CD1 CD2 REMARK 470 LEU F 194 CG CD1 CD2 REMARK 470 ASN F 195 CG OD1 ND2 REMARK 470 LEU F 196 CG CD1 CD2 REMARK 470 LEU F 197 CG CD1 CD2 REMARK 470 ASP F 198 CG OD1 OD2 REMARK 470 SER F 199 OG REMARK 470 LEU F 200 CG CD1 CD2 REMARK 470 ASN F 201 CG OD1 ND2 REMARK 470 ASP F 202 CG OD1 OD2 REMARK 470 ARG F 203 CG CD NE CZ NH1 NH2 REMARK 470 ILE F 205 CG1 CG2 CD1 REMARK 470 LYS F 206 CG CD CE NZ REMARK 470 PHE F 207 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU F 209 CG CD1 CD2 REMARK 470 SER F 210 OG REMARK 470 ASN F 211 CG OD1 ND2 REMARK 470 VAL F 212 CG1 CG2 REMARK 470 LEU F 213 CG CD1 CD2 REMARK 470 GLU F 214 CG CD OE1 OE2 REMARK 470 HIS F 216 CG ND1 CD2 CE1 NE2 REMARK 470 LYS F 218 CG CD CE NZ REMARK 470 GLU F 219 CG CD OE1 OE2 REMARK 470 ASN F 220 CG OD1 ND2 REMARK 470 THR F 221 OG1 CG2 REMARK 470 LEU F 222 CG CD1 CD2 REMARK 470 LEU F 223 CG CD1 CD2 REMARK 470 LYS F 224 CG CD CE NZ REMARK 470 GLU F 225 CG CD OE1 OE2 REMARK 470 TRP F 226 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP F 226 CZ3 CH2 REMARK 470 SER F 227 OG REMARK 470 LYS F 228 CG CD CE NZ REMARK 470 LYS F 229 CG CD CE NZ REMARK 470 ASN F 231 CG OD1 ND2 REMARK 470 VAL F 232 CG1 CG2 REMARK 470 LYS F 233 CG CD CE NZ REMARK 470 HIS F 234 CG ND1 CD2 CE1 NE2 REMARK 470 LEU F 235 CG CD1 CD2 REMARK 470 THR F 252 OG1 CG2 REMARK 470 ASP F 253 CG OD1 OD2 REMARK 470 GLU F 254 CG CD OE1 OE2 REMARK 470 VAL F 255 CG1 CG2 REMARK 470 TYR F 256 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE F 257 CG1 CG2 CD1 REMARK 470 PHE F 258 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN F 259 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT 2 201 P DT 2 201 OP3 -0.078 REMARK 500 DT 6 601 C4' DT 6 601 C3' -0.070 REMARK 500 DT 6 601 C3' DT 6 601 C2' 0.265 REMARK 500 DT 6 601 O3' DT 6 601 C3' -0.087 REMARK 500 DT 6 601 C5 DT 6 601 C7 0.048 REMARK 500 DC 6 602 O3' DA 6 603 P -0.074 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT 6 601 OP1 - P - OP2 ANGL. DEV. = -12.2 DEGREES REMARK 500 DT 6 601 O4' - C4' - C3' ANGL. DEV. = 7.9 DEGREES REMARK 500 DT 6 601 C4' - C3' - O3' ANGL. DEV. = 34.7 DEGREES REMARK 500 DT 6 601 C2' - C3' - O3' ANGL. DEV. = -25.7 DEGREES REMARK 500 DT 6 601 C4' - C3' - C2' ANGL. DEV. = -7.5 DEGREES REMARK 500 DT 6 601 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC 6 602 OP1 - P - OP2 ANGL. DEV. = -9.1 DEGREES REMARK 500 DC 6 602 P - O5' - C5' ANGL. DEV. = -12.1 DEGREES REMARK 500 DC 6 602 C3' - O3' - P ANGL. DEV. = -10.7 DEGREES REMARK 500 DA 6 603 OP1 - P - OP2 ANGL. DEV. = -10.4 DEGREES REMARK 500 TYR A 77 CB - CG - CD2 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 78 48.73 38.86 REMARK 500 ASN A 113 14.90 59.23 REMARK 500 ASN A 211 -173.07 -175.69 REMARK 500 HIS A 216 44.22 33.01 REMARK 500 LYS A 247 -7.54 -148.01 REMARK 500 TYR B 181 0.35 -67.50 REMARK 500 ASN B 211 -172.37 178.87 REMARK 500 LYS B 249 -144.39 -156.03 REMARK 500 ASN B 250 31.48 -77.67 REMARK 500 THR C 82 -0.80 -140.23 REMARK 500 PHE C 111 113.35 -39.39 REMARK 500 THR C 131 -163.33 -160.77 REMARK 500 ASN C 146 14.85 -142.03 REMARK 500 TYR C 181 2.65 -69.19 REMARK 500 ASN C 211 -178.21 179.06 REMARK 500 HIS C 216 -9.24 74.76 REMARK 500 GLU C 248 116.11 -31.31 REMARK 500 LYS C 249 79.71 -161.55 REMARK 500 GLN D 52 87.16 -64.92 REMARK 500 SER D 112 19.11 56.85 REMARK 500 THR D 131 -158.73 -146.39 REMARK 500 ALA D 179 135.22 -175.99 REMARK 500 TYR D 181 3.19 -60.31 REMARK 500 ASN D 211 -171.00 174.79 REMARK 500 HIS D 215 111.23 177.37 REMARK 500 HIS D 216 16.25 59.49 REMARK 500 LYS D 228 -6.90 -56.04 REMARK 500 LYS E 19 -7.88 -51.25 REMARK 500 TYR E 25 145.08 -170.19 REMARK 500 VAL E 38 -61.17 -90.24 REMARK 500 SER E 80 -174.23 -178.35 REMARK 500 SER E 83 66.88 -155.65 REMARK 500 LYS E 134 30.14 -81.40 REMARK 500 ASP E 171 70.77 -154.17 REMARK 500 ALA E 179 130.73 -177.83 REMARK 500 LYS E 183 -1.01 -59.25 REMARK 500 ASN E 211 147.28 171.91 REMARK 500 GLU E 214 77.78 -172.92 REMARK 500 THR E 221 -80.43 -38.30 REMARK 500 LYS E 233 118.33 -177.02 REMARK 500 TYR E 256 73.23 -158.40 REMARK 500 PHE E 258 -155.23 -142.39 REMARK 500 ALA F 6 155.28 -46.58 REMARK 500 SER F 13 -71.31 -67.48 REMARK 500 CYS F 33 -78.80 -26.98 REMARK 500 ILE F 51 -38.86 -39.05 REMARK 500 GLN F 52 85.35 -54.84 REMARK 500 THR F 82 18.23 -147.56 REMARK 500 SER F 83 36.74 -86.36 REMARK 500 GLU F 85 -80.91 -62.36 REMARK 500 REMARK 500 THIS ENTRY HAS 70 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG 1 107 0.05 SIDE CHAIN REMARK 500 DT 1 112 0.07 SIDE CHAIN REMARK 500 DT 3 314 0.06 SIDE CHAIN REMARK 500 DG 4 407 0.06 SIDE CHAIN REMARK 500 DG 7 713 0.06 SIDE CHAIN REMARK 500 DG 8 807 0.05 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA 2 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH 1 604 O REMARK 620 2 HOH 1 605 O 75.6 REMARK 620 3 HOH 1 607 O 84.9 74.4 REMARK 620 4 HOH 2 606 O 102.4 78.6 149.3 REMARK 620 5 HOH 2 609 O 72.9 139.5 126.4 83.9 REMARK 620 6 HOH B 502 O 146.4 71.6 79.5 78.3 139.5 REMARK 620 7 HOH B 503 O 151.3 127.7 86.2 99.2 90.9 57.1 REMARK 620 8 HOH B 504 O 76.3 142.5 78.9 131.8 49.0 128.4 75.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA 4 508 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH 3 612 O REMARK 620 2 HOH 3 613 O 73.7 REMARK 620 3 HOH 3 615 O 82.1 69.4 REMARK 620 4 HOH 4 614 O 96.6 78.6 147.1 REMARK 620 5 HOH 4 619 O 73.1 129.9 139.3 69.2 REMARK 620 6 HOH A 497 O 162.1 123.2 97.9 93.0 96.5 REMARK 620 7 HOH A 498 O 77.7 148.1 93.3 118.7 50.6 84.5 REMARK 620 8 HOH A 499 O 145.3 72.3 80.1 83.0 136.5 50.9 132.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL 8 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL 1 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL 2 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA 2 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA 4 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH D 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH E 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH F 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Q0S RELATED DB: PDB REMARK 900 BINARY STRUCTURE OF T4DAM WITH ADOHCY REMARK 900 RELATED ID: 1Q0T RELATED DB: PDB REMARK 900 TERNARY STRUCTURE OF T4DAM WITH ADOHCY AND DNA REMARK 900 RELATED ID: 1YF3 RELATED DB: PDB REMARK 900 T4DAM IN COMPLEX WITH ADOHCY AND 13-MER OLIGONUCLEOTIDE MAKING NON- REMARK 900 AND SEMI-SPECIFIC (~1/4) CONTACT REMARK 900 RELATED ID: 1YFL RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE 1) AUTHOR STATES THAT Q139R, Y140F AND Q209L REFLECT REMARK 999 CONFLICTS BETWEEN DEPOSITED PROTEIN SEQUENCE AND TRANSLATED REMARK 999 DEPOSITED DNA-->PROTEIN SEQUENCE. FROM THEIR ELECTRON DENSITY, REMARK 999 IT APPEARS THE TRANSLATED DNA SEQUENCE IS CORRECT ; 2) IT IS REMARK 999 POSSIBLE RESIDUE 119 COULD BE A TYR RATHER THAN ASP BASED ON REMARK 999 SOME ELECTRON DENSITY EVIDENCE. DBREF 1YFJ A 1 259 UNP P04392 DMA_BPT4 1 259 DBREF 1YFJ B 1 259 UNP P04392 DMA_BPT4 1 259 DBREF 1YFJ C 1 259 UNP P04392 DMA_BPT4 1 259 DBREF 1YFJ D 1 259 UNP P04392 DMA_BPT4 1 259 DBREF 1YFJ E 1 259 UNP P04392 DMA_BPT4 1 259 DBREF 1YFJ F 1 259 UNP P04392 DMA_BPT4 1 259 DBREF 1YFJ 1 101 115 PDB 1YFJ 1YFJ 101 115 DBREF 1YFJ 2 201 215 PDB 1YFJ 1YFJ 201 215 DBREF 1YFJ 3 301 315 PDB 1YFJ 1YFJ 301 315 DBREF 1YFJ 4 401 415 PDB 1YFJ 1YFJ 401 415 DBREF 1YFJ 5 501 515 PDB 1YFJ 1YFJ 501 515 DBREF 1YFJ 6 601 615 PDB 1YFJ 1YFJ 601 615 DBREF 1YFJ 7 701 715 PDB 1YFJ 1YFJ 701 715 DBREF 1YFJ 8 801 815 PDB 1YFJ 1YFJ 801 815 DBREF 1YFJ 9 901 915 PDB 1YFJ 1YFJ 901 915 DBREF 1YFJ 0 1001 1015 PDB 1YFJ 1YFJ 1001 1015 SEQADV 1YFJ ARG A 139 UNP P04392 GLN 139 SEE REMARK 999 SEQADV 1YFJ PHE A 140 UNP P04392 TYR 140 SEE REMARK 999 SEQADV 1YFJ LEU A 209 UNP P04392 GLN 209 SEE REMARK 999 SEQADV 1YFJ ARG B 139 UNP P04392 GLN 139 SEE REMARK 999 SEQADV 1YFJ PHE B 140 UNP P04392 TYR 140 SEE REMARK 999 SEQADV 1YFJ LEU B 209 UNP P04392 GLN 209 SEE REMARK 999 SEQADV 1YFJ ARG C 139 UNP P04392 GLN 139 SEE REMARK 999 SEQADV 1YFJ PHE C 140 UNP P04392 TYR 140 SEE REMARK 999 SEQADV 1YFJ LEU C 209 UNP P04392 GLN 209 SEE REMARK 999 SEQADV 1YFJ ARG D 139 UNP P04392 GLN 139 SEE REMARK 999 SEQADV 1YFJ PHE D 140 UNP P04392 TYR 140 SEE REMARK 999 SEQADV 1YFJ LEU D 209 UNP P04392 GLN 209 SEE REMARK 999 SEQADV 1YFJ ARG E 139 UNP P04392 GLN 139 SEE REMARK 999 SEQADV 1YFJ PHE E 140 UNP P04392 TYR 140 SEE REMARK 999 SEQADV 1YFJ LEU E 209 UNP P04392 GLN 209 SEE REMARK 999 SEQADV 1YFJ ARG F 139 UNP P04392 GLN 139 SEE REMARK 999 SEQADV 1YFJ PHE F 140 UNP P04392 TYR 140 SEE REMARK 999 SEQADV 1YFJ LEU F 209 UNP P04392 GLN 209 SEE REMARK 999 SEQRES 1 1 15 DT DC DA DC DA DG DG DA DT DC DC DT DG SEQRES 2 1 15 DT DG SEQRES 1 2 15 DT DC DA DC DA DG DG DA DT DC DC DT DG SEQRES 2 2 15 DT DG SEQRES 1 3 15 DT DC DA DC DA DG DG DA DT DC DC DT DG SEQRES 2 3 15 DT DG SEQRES 1 4 15 DT DC DA DC DA DG DG DA DT DC DC DT DG SEQRES 2 4 15 DT DG SEQRES 1 5 15 DT DC DA DC DA DG DG DA DT DC DC DT DG SEQRES 2 5 15 DT DG SEQRES 1 6 15 DT DC DA DC DA DG DG DA DT DC DC DT DG SEQRES 2 6 15 DT DG SEQRES 1 7 15 DT DC DA DC DA DG DG DA DT DC DC DT DG SEQRES 2 7 15 DT DG SEQRES 1 8 15 DT DC DA DC DA DG DG DA DT DC DC DT DG SEQRES 2 8 15 DT DG SEQRES 1 9 15 DT DC DA DC DA DG DG DA DT DC DC DT DG SEQRES 2 9 15 DT DG SEQRES 1 0 15 DT DC DA DC DA DG DG DA DT DC DC DT DG SEQRES 2 0 15 DT DG SEQRES 1 A 259 MET LEU GLY ALA ILE ALA TYR THR GLY ASN LYS GLN SER SEQRES 2 A 259 LEU LEU PRO GLU LEU LYS SER HIS PHE PRO LYS TYR ASN SEQRES 3 A 259 ARG PHE VAL ASP LEU PHE CYS GLY GLY LEU SER VAL SER SEQRES 4 A 259 LEU ASN VAL ASN GLY PRO VAL LEU ALA ASN ASP ILE GLN SEQRES 5 A 259 GLU PRO ILE ILE GLU MET TYR LYS ARG LEU ILE ASN VAL SEQRES 6 A 259 SER TRP ASP ASP VAL LEU LYS VAL ILE LYS GLN TYR LYS SEQRES 7 A 259 LEU SER LYS THR SER LYS GLU GLU PHE LEU LYS LEU ARG SEQRES 8 A 259 GLU ASP TYR ASN LYS THR ARG ASP PRO LEU LEU LEU TYR SEQRES 9 A 259 VAL LEU HIS PHE HIS GLY PHE SER ASN MET ILE ARG ILE SEQRES 10 A 259 ASN ASP LYS GLY ASN PHE THR THR PRO PHE GLY LYS ARG SEQRES 11 A 259 THR ILE ASN LYS ASN SER GLU LYS ARG PHE ASN HIS PHE SEQRES 12 A 259 LYS GLN ASN CYS ASP LYS ILE ILE PHE SER SER LEU HIS SEQRES 13 A 259 PHE LYS ASP VAL LYS ILE LEU ASP GLY ASP PHE VAL TYR SEQRES 14 A 259 VAL ASP PRO PRO TYR LEU ILE THR VAL ALA ASP TYR ASN SEQRES 15 A 259 LYS PHE TRP SER GLU ASP GLU GLU LYS ASP LEU LEU ASN SEQRES 16 A 259 LEU LEU ASP SER LEU ASN ASP ARG GLY ILE LYS PHE GLY SEQRES 17 A 259 LEU SER ASN VAL LEU GLU HIS HIS GLY LYS GLU ASN THR SEQRES 18 A 259 LEU LEU LYS GLU TRP SER LYS LYS TYR ASN VAL LYS HIS SEQRES 19 A 259 LEU ASN LYS LYS TYR VAL PHE ASN ILE TYR HIS SER LYS SEQRES 20 A 259 GLU LYS ASN GLY THR ASP GLU VAL TYR ILE PHE ASN SEQRES 1 B 259 MET LEU GLY ALA ILE ALA TYR THR GLY ASN LYS GLN SER SEQRES 2 B 259 LEU LEU PRO GLU LEU LYS SER HIS PHE PRO LYS TYR ASN SEQRES 3 B 259 ARG PHE VAL ASP LEU PHE CYS GLY GLY LEU SER VAL SER SEQRES 4 B 259 LEU ASN VAL ASN GLY PRO VAL LEU ALA ASN ASP ILE GLN SEQRES 5 B 259 GLU PRO ILE ILE GLU MET TYR LYS ARG LEU ILE ASN VAL SEQRES 6 B 259 SER TRP ASP ASP VAL LEU LYS VAL ILE LYS GLN TYR LYS SEQRES 7 B 259 LEU SER LYS THR SER LYS GLU GLU PHE LEU LYS LEU ARG SEQRES 8 B 259 GLU ASP TYR ASN LYS THR ARG ASP PRO LEU LEU LEU TYR SEQRES 9 B 259 VAL LEU HIS PHE HIS GLY PHE SER ASN MET ILE ARG ILE SEQRES 10 B 259 ASN ASP LYS GLY ASN PHE THR THR PRO PHE GLY LYS ARG SEQRES 11 B 259 THR ILE ASN LYS ASN SER GLU LYS ARG PHE ASN HIS PHE SEQRES 12 B 259 LYS GLN ASN CYS ASP LYS ILE ILE PHE SER SER LEU HIS SEQRES 13 B 259 PHE LYS ASP VAL LYS ILE LEU ASP GLY ASP PHE VAL TYR SEQRES 14 B 259 VAL ASP PRO PRO TYR LEU ILE THR VAL ALA ASP TYR ASN SEQRES 15 B 259 LYS PHE TRP SER GLU ASP GLU GLU LYS ASP LEU LEU ASN SEQRES 16 B 259 LEU LEU ASP SER LEU ASN ASP ARG GLY ILE LYS PHE GLY SEQRES 17 B 259 LEU SER ASN VAL LEU GLU HIS HIS GLY LYS GLU ASN THR SEQRES 18 B 259 LEU LEU LYS GLU TRP SER LYS LYS TYR ASN VAL LYS HIS SEQRES 19 B 259 LEU ASN LYS LYS TYR VAL PHE ASN ILE TYR HIS SER LYS SEQRES 20 B 259 GLU LYS ASN GLY THR ASP GLU VAL TYR ILE PHE ASN SEQRES 1 C 259 MET LEU GLY ALA ILE ALA TYR THR GLY ASN LYS GLN SER SEQRES 2 C 259 LEU LEU PRO GLU LEU LYS SER HIS PHE PRO LYS TYR ASN SEQRES 3 C 259 ARG PHE VAL ASP LEU PHE CYS GLY GLY LEU SER VAL SER SEQRES 4 C 259 LEU ASN VAL ASN GLY PRO VAL LEU ALA ASN ASP ILE GLN SEQRES 5 C 259 GLU PRO ILE ILE GLU MET TYR LYS ARG LEU ILE ASN VAL SEQRES 6 C 259 SER TRP ASP ASP VAL LEU LYS VAL ILE LYS GLN TYR LYS SEQRES 7 C 259 LEU SER LYS THR SER LYS GLU GLU PHE LEU LYS LEU ARG SEQRES 8 C 259 GLU ASP TYR ASN LYS THR ARG ASP PRO LEU LEU LEU TYR SEQRES 9 C 259 VAL LEU HIS PHE HIS GLY PHE SER ASN MET ILE ARG ILE SEQRES 10 C 259 ASN ASP LYS GLY ASN PHE THR THR PRO PHE GLY LYS ARG SEQRES 11 C 259 THR ILE ASN LYS ASN SER GLU LYS ARG PHE ASN HIS PHE SEQRES 12 C 259 LYS GLN ASN CYS ASP LYS ILE ILE PHE SER SER LEU HIS SEQRES 13 C 259 PHE LYS ASP VAL LYS ILE LEU ASP GLY ASP PHE VAL TYR SEQRES 14 C 259 VAL ASP PRO PRO TYR LEU ILE THR VAL ALA ASP TYR ASN SEQRES 15 C 259 LYS PHE TRP SER GLU ASP GLU GLU LYS ASP LEU LEU ASN SEQRES 16 C 259 LEU LEU ASP SER LEU ASN ASP ARG GLY ILE LYS PHE GLY SEQRES 17 C 259 LEU SER ASN VAL LEU GLU HIS HIS GLY LYS GLU ASN THR SEQRES 18 C 259 LEU LEU LYS GLU TRP SER LYS LYS TYR ASN VAL LYS HIS SEQRES 19 C 259 LEU ASN LYS LYS TYR VAL PHE ASN ILE TYR HIS SER LYS SEQRES 20 C 259 GLU LYS ASN GLY THR ASP GLU VAL TYR ILE PHE ASN SEQRES 1 D 259 MET LEU GLY ALA ILE ALA TYR THR GLY ASN LYS GLN SER SEQRES 2 D 259 LEU LEU PRO GLU LEU LYS SER HIS PHE PRO LYS TYR ASN SEQRES 3 D 259 ARG PHE VAL ASP LEU PHE CYS GLY GLY LEU SER VAL SER SEQRES 4 D 259 LEU ASN VAL ASN GLY PRO VAL LEU ALA ASN ASP ILE GLN SEQRES 5 D 259 GLU PRO ILE ILE GLU MET TYR LYS ARG LEU ILE ASN VAL SEQRES 6 D 259 SER TRP ASP ASP VAL LEU LYS VAL ILE LYS GLN TYR LYS SEQRES 7 D 259 LEU SER LYS THR SER LYS GLU GLU PHE LEU LYS LEU ARG SEQRES 8 D 259 GLU ASP TYR ASN LYS THR ARG ASP PRO LEU LEU LEU TYR SEQRES 9 D 259 VAL LEU HIS PHE HIS GLY PHE SER ASN MET ILE ARG ILE SEQRES 10 D 259 ASN ASP LYS GLY ASN PHE THR THR PRO PHE GLY LYS ARG SEQRES 11 D 259 THR ILE ASN LYS ASN SER GLU LYS ARG PHE ASN HIS PHE SEQRES 12 D 259 LYS GLN ASN CYS ASP LYS ILE ILE PHE SER SER LEU HIS SEQRES 13 D 259 PHE LYS ASP VAL LYS ILE LEU ASP GLY ASP PHE VAL TYR SEQRES 14 D 259 VAL ASP PRO PRO TYR LEU ILE THR VAL ALA ASP TYR ASN SEQRES 15 D 259 LYS PHE TRP SER GLU ASP GLU GLU LYS ASP LEU LEU ASN SEQRES 16 D 259 LEU LEU ASP SER LEU ASN ASP ARG GLY ILE LYS PHE GLY SEQRES 17 D 259 LEU SER ASN VAL LEU GLU HIS HIS GLY LYS GLU ASN THR SEQRES 18 D 259 LEU LEU LYS GLU TRP SER LYS LYS TYR ASN VAL LYS HIS SEQRES 19 D 259 LEU ASN LYS LYS TYR VAL PHE ASN ILE TYR HIS SER LYS SEQRES 20 D 259 GLU LYS ASN GLY THR ASP GLU VAL TYR ILE PHE ASN SEQRES 1 E 259 MET LEU GLY ALA ILE ALA TYR THR GLY ASN LYS GLN SER SEQRES 2 E 259 LEU LEU PRO GLU LEU LYS SER HIS PHE PRO LYS TYR ASN SEQRES 3 E 259 ARG PHE VAL ASP LEU PHE CYS GLY GLY LEU SER VAL SER SEQRES 4 E 259 LEU ASN VAL ASN GLY PRO VAL LEU ALA ASN ASP ILE GLN SEQRES 5 E 259 GLU PRO ILE ILE GLU MET TYR LYS ARG LEU ILE ASN VAL SEQRES 6 E 259 SER TRP ASP ASP VAL LEU LYS VAL ILE LYS GLN TYR LYS SEQRES 7 E 259 LEU SER LYS THR SER LYS GLU GLU PHE LEU LYS LEU ARG SEQRES 8 E 259 GLU ASP TYR ASN LYS THR ARG ASP PRO LEU LEU LEU TYR SEQRES 9 E 259 VAL LEU HIS PHE HIS GLY PHE SER ASN MET ILE ARG ILE SEQRES 10 E 259 ASN ASP LYS GLY ASN PHE THR THR PRO PHE GLY LYS ARG SEQRES 11 E 259 THR ILE ASN LYS ASN SER GLU LYS ARG PHE ASN HIS PHE SEQRES 12 E 259 LYS GLN ASN CYS ASP LYS ILE ILE PHE SER SER LEU HIS SEQRES 13 E 259 PHE LYS ASP VAL LYS ILE LEU ASP GLY ASP PHE VAL TYR SEQRES 14 E 259 VAL ASP PRO PRO TYR LEU ILE THR VAL ALA ASP TYR ASN SEQRES 15 E 259 LYS PHE TRP SER GLU ASP GLU GLU LYS ASP LEU LEU ASN SEQRES 16 E 259 LEU LEU ASP SER LEU ASN ASP ARG GLY ILE LYS PHE GLY SEQRES 17 E 259 LEU SER ASN VAL LEU GLU HIS HIS GLY LYS GLU ASN THR SEQRES 18 E 259 LEU LEU LYS GLU TRP SER LYS LYS TYR ASN VAL LYS HIS SEQRES 19 E 259 LEU ASN LYS LYS TYR VAL PHE ASN ILE TYR HIS SER LYS SEQRES 20 E 259 GLU LYS ASN GLY THR ASP GLU VAL TYR ILE PHE ASN SEQRES 1 F 259 MET LEU GLY ALA ILE ALA TYR THR GLY ASN LYS GLN SER SEQRES 2 F 259 LEU LEU PRO GLU LEU LYS SER HIS PHE PRO LYS TYR ASN SEQRES 3 F 259 ARG PHE VAL ASP LEU PHE CYS GLY GLY LEU SER VAL SER SEQRES 4 F 259 LEU ASN VAL ASN GLY PRO VAL LEU ALA ASN ASP ILE GLN SEQRES 5 F 259 GLU PRO ILE ILE GLU MET TYR LYS ARG LEU ILE ASN VAL SEQRES 6 F 259 SER TRP ASP ASP VAL LEU LYS VAL ILE LYS GLN TYR LYS SEQRES 7 F 259 LEU SER LYS THR SER LYS GLU GLU PHE LEU LYS LEU ARG SEQRES 8 F 259 GLU ASP TYR ASN LYS THR ARG ASP PRO LEU LEU LEU TYR SEQRES 9 F 259 VAL LEU HIS PHE HIS GLY PHE SER ASN MET ILE ARG ILE SEQRES 10 F 259 ASN ASP LYS GLY ASN PHE THR THR PRO PHE GLY LYS ARG SEQRES 11 F 259 THR ILE ASN LYS ASN SER GLU LYS ARG PHE ASN HIS PHE SEQRES 12 F 259 LYS GLN ASN CYS ASP LYS ILE ILE PHE SER SER LEU HIS SEQRES 13 F 259 PHE LYS ASP VAL LYS ILE LEU ASP GLY ASP PHE VAL TYR SEQRES 14 F 259 VAL ASP PRO PRO TYR LEU ILE THR VAL ALA ASP TYR ASN SEQRES 15 F 259 LYS PHE TRP SER GLU ASP GLU GLU LYS ASP LEU LEU ASN SEQRES 16 F 259 LEU LEU ASP SER LEU ASN ASP ARG GLY ILE LYS PHE GLY SEQRES 17 F 259 LEU SER ASN VAL LEU GLU HIS HIS GLY LYS GLU ASN THR SEQRES 18 F 259 LEU LEU LYS GLU TRP SER LYS LYS TYR ASN VAL LYS HIS SEQRES 19 F 259 LEU ASN LYS LYS TYR VAL PHE ASN ILE TYR HIS SER LYS SEQRES 20 F 259 GLU LYS ASN GLY THR ASP GLU VAL TYR ILE PHE ASN HET CL 1 602 1 HET CL 2 601 1 HET CL 2 603 1 HET CA 2 502 1 HET CA 4 508 1 HET CL 8 600 1 HET SAH A 401 26 HET SAH B 402 26 HET SAH C 403 26 HET SAH D 404 26 HET SAH E 405 26 HET SAH F 406 26 HETNAM CL CHLORIDE ION HETNAM CA CALCIUM ION HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE FORMUL 17 CL 4(CL 1-) FORMUL 20 CA 2(CA 2+) FORMUL 23 SAH 6(C14 H20 N6 O5 S) FORMUL 29 HOH *343(H2 O) HELIX 1 1 LEU A 14 PHE A 22 1 9 HELIX 2 2 VAL A 38 VAL A 42 5 5 HELIX 3 3 GLN A 52 ILE A 63 1 12 HELIX 4 4 SER A 66 TYR A 77 1 12 HELIX 5 5 SER A 83 ARG A 98 1 16 HELIX 6 6 ASP A 99 GLY A 110 1 12 HELIX 7 7 PHE A 111 MET A 114 5 4 HELIX 8 8 ASN A 133 CYS A 147 1 15 HELIX 9 9 HIS A 156 VAL A 160 5 5 HELIX 10 10 ALA A 179 TRP A 185 5 7 HELIX 11 11 SER A 186 ARG A 203 1 18 HELIX 12 12 ASN A 220 LYS A 228 1 9 HELIX 13 13 ASN A 236 HIS A 245 1 10 HELIX 14 14 LEU B 14 SER B 20 1 7 HELIX 15 15 VAL B 38 VAL B 42 5 5 HELIX 16 16 GLN B 52 ILE B 63 1 12 HELIX 17 17 SER B 66 TYR B 77 1 12 HELIX 18 18 SER B 83 ARG B 98 1 16 HELIX 19 19 ASP B 99 PHE B 108 1 10 HELIX 20 20 GLY B 110 MET B 114 5 5 HELIX 21 21 ASN B 133 CYS B 147 1 15 HELIX 22 22 HIS B 156 VAL B 160 5 5 HELIX 23 23 ALA B 179 TRP B 185 5 7 HELIX 24 24 SER B 186 ARG B 203 1 18 HELIX 25 25 ASN B 220 LYS B 228 1 9 HELIX 26 26 ASN B 236 TYR B 244 1 9 HELIX 27 27 LEU C 14 PHE C 22 1 9 HELIX 28 28 VAL C 38 VAL C 42 5 5 HELIX 29 29 GLN C 52 ILE C 63 1 12 HELIX 30 30 SER C 66 LYS C 78 1 13 HELIX 31 31 SER C 83 ARG C 98 1 16 HELIX 32 32 ASP C 99 PHE C 108 1 10 HELIX 33 33 HIS C 109 MET C 114 5 6 HELIX 34 34 ASN C 133 GLN C 145 1 13 HELIX 35 35 HIS C 156 VAL C 160 5 5 HELIX 36 36 ALA C 179 TRP C 185 5 7 HELIX 37 37 SER C 186 ARG C 203 1 18 HELIX 38 38 ASN C 220 LYS C 228 1 9 HELIX 39 39 ASN C 236 TYR C 244 1 9 HELIX 40 40 LEU D 14 SER D 20 1 7 HELIX 41 41 VAL D 38 VAL D 42 5 5 HELIX 42 42 GLN D 52 ILE D 63 1 12 HELIX 43 43 SER D 66 LYS D 78 1 13 HELIX 44 44 SER D 83 ARG D 98 1 16 HELIX 45 45 ASP D 99 GLY D 110 1 12 HELIX 46 46 PHE D 111 MET D 114 5 4 HELIX 47 47 ASN D 135 GLN D 145 1 11 HELIX 48 48 HIS D 156 VAL D 160 5 5 HELIX 49 49 ALA D 179 TRP D 185 5 7 HELIX 50 50 SER D 186 ARG D 203 1 18 HELIX 51 51 ASN D 220 LYS D 228 1 9 HELIX 52 52 ASN D 236 ASN D 242 1 7 HELIX 53 53 LEU E 14 LYS E 19 1 6 HELIX 54 54 SER E 20 PHE E 22 5 3 HELIX 55 55 VAL E 38 VAL E 42 5 5 HELIX 56 56 GLN E 52 ILE E 63 1 12 HELIX 57 57 SER E 66 TYR E 77 1 12 HELIX 58 58 SER E 83 ARG E 98 1 16 HELIX 59 59 ASP E 99 HIS E 109 1 11 HELIX 60 60 GLY E 110 MET E 114 5 5 HELIX 61 61 ASN E 135 GLN E 145 1 11 HELIX 62 62 ASN E 146 ASP E 148 5 3 HELIX 63 63 HIS E 156 VAL E 160 5 5 HELIX 64 64 ALA E 179 TRP E 185 5 7 HELIX 65 65 SER E 186 ARG E 203 1 18 HELIX 66 66 ASN E 220 LYS E 228 1 9 HELIX 67 67 VAL F 38 VAL F 42 5 5 HELIX 68 68 GLN F 52 LEU F 62 1 11 HELIX 69 69 ILE F 63 VAL F 65 5 3 HELIX 70 70 SER F 66 TYR F 77 1 12 HELIX 71 71 SER F 83 ARG F 98 1 16 HELIX 72 72 ASP F 99 LEU F 106 1 8 HELIX 73 73 HIS F 107 MET F 114 5 8 HELIX 74 74 ASN F 135 ASP F 148 1 14 HELIX 75 75 ALA F 179 PHE F 184 5 6 HELIX 76 76 SER F 186 LYS F 191 1 6 SHEET 1 A 7 ILE A 150 SER A 153 0 SHEET 2 A 7 VAL A 46 ASN A 49 1 N ALA A 48 O SER A 153 SHEET 3 A 7 ARG A 27 ASP A 30 1 N PHE A 28 O LEU A 47 SHEET 4 A 7 ASP A 166 VAL A 170 1 O TYR A 169 N VAL A 29 SHEET 5 A 7 PHE A 207 VAL A 212 1 O GLY A 208 N VAL A 170 SHEET 6 A 7 GLU A 254 PHE A 258 -1 O ILE A 257 N LEU A 209 SHEET 7 A 7 ASN A 231 HIS A 234 -1 N ASN A 231 O PHE A 258 SHEET 1 B 2 GLU A 214 HIS A 215 0 SHEET 2 B 2 LYS A 218 GLU A 219 -1 O LYS A 218 N HIS A 215 SHEET 1 C 7 ILE B 150 SER B 153 0 SHEET 2 C 7 VAL B 46 ASN B 49 1 N VAL B 46 O ILE B 151 SHEET 3 C 7 ARG B 27 ASP B 30 1 N PHE B 28 O LEU B 47 SHEET 4 C 7 ASP B 166 VAL B 170 1 O PHE B 167 N ARG B 27 SHEET 5 C 7 LYS B 206 VAL B 212 1 O SER B 210 N VAL B 170 SHEET 6 C 7 GLU B 254 PHE B 258 -1 O ILE B 257 N LEU B 209 SHEET 7 C 7 ASN B 231 HIS B 234 -1 N ASN B 231 O PHE B 258 SHEET 1 D 2 GLU B 214 HIS B 215 0 SHEET 2 D 2 LYS B 218 GLU B 219 -1 O LYS B 218 N HIS B 215 SHEET 1 E 6 ILE C 150 SER C 153 0 SHEET 2 E 6 VAL C 46 ASN C 49 1 N ALA C 48 O SER C 153 SHEET 3 E 6 ARG C 27 ASP C 30 1 N PHE C 28 O LEU C 47 SHEET 4 E 6 ASP C 166 VAL C 170 1 O PHE C 167 N ARG C 27 SHEET 5 E 6 PHE C 207 HIS C 215 1 O GLY C 208 N VAL C 170 SHEET 6 E 6 LYS C 218 GLU C 219 -1 O LYS C 218 N HIS C 215 SHEET 1 F 7 ILE C 150 SER C 153 0 SHEET 2 F 7 VAL C 46 ASN C 49 1 N ALA C 48 O SER C 153 SHEET 3 F 7 ARG C 27 ASP C 30 1 N PHE C 28 O LEU C 47 SHEET 4 F 7 ASP C 166 VAL C 170 1 O PHE C 167 N ARG C 27 SHEET 5 F 7 PHE C 207 HIS C 215 1 O GLY C 208 N VAL C 170 SHEET 6 F 7 THR C 252 PHE C 258 -1 O VAL C 255 N ASN C 211 SHEET 7 F 7 ASN C 231 HIS C 234 -1 N ASN C 231 O PHE C 258 SHEET 1 G 7 ILE D 150 SER D 153 0 SHEET 2 G 7 VAL D 46 ASN D 49 1 N ALA D 48 O SER D 153 SHEET 3 G 7 ARG D 27 ASP D 30 1 N ASP D 30 O ASN D 49 SHEET 4 G 7 ASP D 166 VAL D 170 1 O PHE D 167 N VAL D 29 SHEET 5 G 7 LYS D 206 VAL D 212 1 O GLY D 208 N VAL D 170 SHEET 6 G 7 GLU D 254 PHE D 258 -1 O VAL D 255 N ASN D 211 SHEET 7 G 7 ASN D 231 HIS D 234 -1 N ASN D 231 O PHE D 258 SHEET 1 H 2 GLU D 214 HIS D 215 0 SHEET 2 H 2 LYS D 218 GLU D 219 -1 O LYS D 218 N HIS D 215 SHEET 1 I 5 ILE E 150 SER E 153 0 SHEET 2 I 5 VAL E 46 ASN E 49 1 N VAL E 46 O ILE E 151 SHEET 3 I 5 ARG E 27 ASP E 30 1 N ASP E 30 O ASN E 49 SHEET 4 I 5 ASP E 166 VAL E 170 1 O PHE E 167 N VAL E 29 SHEET 5 I 5 PHE E 207 LEU E 209 1 O GLY E 208 N VAL E 170 SHEET 1 J 2 ASN E 211 VAL E 212 0 SHEET 2 J 2 GLU E 254 VAL E 255 -1 O VAL E 255 N ASN E 211 SHEET 1 K 6 VAL F 46 ALA F 48 0 SHEET 2 K 6 ARG F 27 ASP F 30 1 N ASP F 30 O LEU F 47 SHEET 3 K 6 ASP F 166 VAL F 170 1 O PHE F 167 N ARG F 27 SHEET 4 K 6 PHE F 207 SER F 210 1 O SER F 210 N VAL F 170 SHEET 5 K 6 VAL F 255 PHE F 258 -1 O ILE F 257 N LEU F 209 SHEET 6 K 6 LYS F 233 HIS F 234 -1 N LYS F 233 O TYR F 256 LINK O HOH 1 604 CA CA 2 502 1555 1555 2.54 LINK O HOH 1 605 CA CA 2 502 1555 1555 2.47 LINK O HOH 1 607 CA CA 2 502 1555 1555 2.50 LINK CA CA 2 502 O HOH 2 606 1555 1555 2.45 LINK CA CA 2 502 O HOH 2 609 1555 1555 2.61 LINK CA CA 2 502 O HOH B 502 1555 1555 2.62 LINK CA CA 2 502 O HOH B 503 1555 1555 2.57 LINK CA CA 2 502 O HOH B 504 1555 1555 2.82 LINK O HOH 3 612 CA CA 4 508 1555 1555 2.56 LINK O HOH 3 613 CA CA 4 508 1555 1555 2.51 LINK O HOH 3 615 CA CA 4 508 1555 1555 2.43 LINK CA CA 4 508 O HOH 4 614 1555 1555 2.36 LINK CA CA 4 508 O HOH 4 619 1555 1555 2.80 LINK CA CA 4 508 O HOH A 497 1555 1555 2.50 LINK CA CA 4 508 O HOH A 498 1555 1555 2.60 LINK CA CA 4 508 O HOH A 499 1555 1555 2.61 CISPEP 1 GLY A 44 PRO A 45 0 -0.42 CISPEP 2 GLY B 44 PRO B 45 0 -0.59 CISPEP 3 GLY C 44 PRO C 45 0 -0.37 CISPEP 4 GLY D 44 PRO D 45 0 -0.03 CISPEP 5 GLY E 44 PRO E 45 0 -0.40 CISPEP 6 GLY F 44 PRO F 45 0 -0.03 SITE 1 AC1 1 DT 4 401 SITE 1 AC2 1 DT 1 101 SITE 1 AC3 1 DT 2 201 SITE 1 AC4 8 HOH 1 604 HOH 1 605 HOH 1 607 HOH 2 606 SITE 2 AC4 8 HOH 2 609 HOH B 502 HOH B 503 HOH B 504 SITE 1 AC5 8 HOH 3 612 HOH 3 613 HOH 3 615 HOH 4 614 SITE 2 AC5 8 HOH 4 619 HOH A 497 HOH A 498 HOH A 499 SITE 1 AC6 21 TYR A 7 ASN A 10 LYS A 11 LEU A 31 SITE 2 AC6 21 PHE A 32 CYS A 33 GLY A 34 GLY A 35 SITE 3 AC6 21 SER A 37 ASP A 50 ILE A 51 GLN A 52 SITE 4 AC6 21 HIS A 156 PHE A 157 ASP A 171 PRO A 173 SITE 5 AC6 21 TYR A 181 PHE A 184 HOH A 427 HOH A 489 SITE 6 AC6 21 HOH C 461 SITE 1 AC7 20 HOH A 490 TYR B 7 ASN B 10 LYS B 11 SITE 2 AC7 20 PHE B 32 CYS B 33 GLY B 34 GLY B 35 SITE 3 AC7 20 SER B 37 ASP B 50 ILE B 51 GLN B 52 SITE 4 AC7 20 HIS B 156 PHE B 157 ASP B 171 PRO B 173 SITE 5 AC7 20 TYR B 181 PHE B 184 HOH B 422 HOH B 437 SITE 1 AC8 21 HOH B 462 TYR C 7 GLY C 9 ASN C 10 SITE 2 AC8 21 LYS C 11 PHE C 32 CYS C 33 GLY C 34 SITE 3 AC8 21 GLY C 35 SER C 37 ASP C 50 ILE C 51 SITE 4 AC8 21 GLN C 52 HIS C 156 PHE C 157 ASP C 171 SITE 5 AC8 21 PRO C 173 TYR C 181 PHE C 184 HOH C 408 SITE 6 AC8 21 HOH C 418 SITE 1 AC9 19 TYR D 7 ASN D 10 LYS D 11 PHE D 32 SITE 2 AC9 19 CYS D 33 GLY D 34 GLY D 35 SER D 37 SITE 3 AC9 19 ASP D 50 ILE D 51 GLN D 52 LEU D 155 SITE 4 AC9 19 HIS D 156 PHE D 157 ASP D 171 PRO D 173 SITE 5 AC9 19 TYR D 181 PHE D 184 HOH D 412 SITE 1 BC1 20 TYR E 7 ASN E 10 LYS E 11 LEU E 31 SITE 2 BC1 20 PHE E 32 CYS E 33 GLY E 34 GLY E 35 SITE 3 BC1 20 SER E 37 VAL E 38 ASP E 50 ILE E 51 SITE 4 BC1 20 GLN E 52 HIS E 156 PHE E 157 ASP E 171 SITE 5 BC1 20 TYR E 181 PHE E 184 HOH E 408 HOH E 416 SITE 1 BC2 18 TYR F 7 GLY F 9 ASN F 10 LYS F 11 SITE 2 BC2 18 LEU F 31 PHE F 32 CYS F 33 GLY F 34 SITE 3 BC2 18 GLY F 35 LEU F 36 SER F 37 ASN F 49 SITE 4 BC2 18 ASP F 50 ILE F 51 HIS F 156 PHE F 157 SITE 5 BC2 18 ASP F 171 TYR F 181 CRYST1 111.200 133.000 189.200 90.00 90.00 90.00 P 21 21 21 40 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008993 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007519 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005285 0.00000