PDB Short entry for 1YG1 HEADER TRANSPORT PROTEIN 04-JAN-05 1YG1 TITLE HOMOLOGY MODEL OF THE HUMAN FACILITATIVE GLUCOSE TITLE 2 TRANSPORTER V (GLUT5) COMPND MOL_ID: 1; COMPND 2 MOLECULE: SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE COMPND 3 TRANSPORTER, MEMBER 5; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: GLUCOSE TRANSPORTER TYPE 5, SMALL INTESTINE, COMPND 6 FRUCTOSE TRANSPORTER SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 OTHER_DETAILS: SLC2A5 KEYWDS SOLUTE CARRIER FAMILY 2, 12-HELICAL, MFS TRANSMEMBRANE KEYWDS 2 PROTEIN, FRUCTOSE TRANSPORT EXPDTA THEORETICAL MODEL AUTHOR A.SALAS-BURGOS,J.C.VERA,J.FISCHBARG REVDAT 1 22-NOV-05 1YG1 0 JRNL AUTH A.SALAS-BURGOS,J.C.VERA,J.FISCHBARG JRNL TITL HOMOLOGY MODEL OF THE HUMAN FACILITATIVE GLUCOSE JRNL TITL 2 TRANSPORTER V (GLUT5) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : MODELLER 7 REMARK 3 AUTHORS : SALI,BLUNDELL,FISER,SANCHEZ,MARTI-RENOM, REMARK 3 YERKOVICH,BADRETDINOV,MELO,OVERINGTON,FEYFANT REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: USED 1SUK AS TO TEMPLATE. REFINEMENT REMARK 3 WITH MODELLER V7. FINAL REFINEMENT WITH HYPERCHEMM AND FF REMARK 3 CHARMM27. REMARK 4 REMARK 4 1YG1 COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JAN-2005. REMARK 100 THE RCSB ID CODE IS RCSB031471. REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: NULL REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 HIS A 313 VAL A 314 -131.10 REMARK 500 VAL A 314 GLN A 315 114.40 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SUK RELATED DB: PDB REMARK 900 HUMAN GLUT1 HOMOLOGY MODEL REMARK 900 RELATED ID: 1JA5 RELATED DB: PDB REMARK 900 MODEL BASED IN PUTATIVE PACKING REMARK 900 RELATED ID: 1YG7 RELATED DB: PDB REMARK 900 HUMAN GLUT7 HOMOLOGY MODEL DBREF 1YG1 A 1 501 UNP P22732 GTR5_HUMAN 1 501 SEQRES 1 A 501 MET GLU GLN GLN ASP GLN SER MET LYS GLU GLY ARG LEU SEQRES 2 A 501 THR LEU VAL LEU ALA LEU ALA THR LEU ILE ALA ALA PHE SEQRES 3 A 501 GLY SER SER PHE GLN TYR GLY TYR ASN VAL ALA ALA VAL SEQRES 4 A 501 ASN SER PRO ALA LEU LEU MET GLN GLN PHE TYR ASN GLU SEQRES 5 A 501 THR TYR TYR GLY ARG THR GLY GLU PHE MET GLU ASP PHE SEQRES 6 A 501 PRO LEU THR LEU LEU TRP SER VAL THR VAL SER MET PHE SEQRES 7 A 501 PRO PHE GLY GLY PHE ILE GLY SER LEU LEU VAL GLY PRO SEQRES 8 A 501 LEU VAL ASN LYS PHE GLY ARG LYS GLY ALA LEU LEU PHE SEQRES 9 A 501 ASN ASN ILE PHE SER ILE VAL PRO ALA ILE LEU MET GLY SEQRES 10 A 501 CYS SER ARG VAL ALA THR SER PHE GLU LEU ILE ILE ILE SEQRES 11 A 501 SER ARG LEU LEU VAL GLY ILE CYS ALA GLY VAL SER SER SEQRES 12 A 501 ASN VAL VAL PRO MET TYR LEU GLY GLU LEU ALA PRO LYS SEQRES 13 A 501 ASN LEU ARG GLY ALA LEU GLY VAL VAL PRO GLN LEU PHE SEQRES 14 A 501 ILE THR VAL GLY ILE LEU VAL ALA GLN ILE PHE GLY LEU SEQRES 15 A 501 ARG ASN LEU LEU ALA ASN VAL ASP GLY TRP PRO ILE LEU SEQRES 16 A 501 LEU GLY LEU THR GLY VAL PRO ALA ALA LEU GLN LEU LEU SEQRES 17 A 501 LEU LEU PRO PHE PHE PRO GLU SER PRO ARG TYR LEU LEU SEQRES 18 A 501 ILE GLN LYS LYS ASP GLU ALA ALA ALA LYS LYS ALA LEU SEQRES 19 A 501 GLN THR LEU ARG GLY TRP ASP SER VAL ASP ARG GLU VAL SEQRES 20 A 501 ALA GLU ILE ARG GLN GLU ASP GLU ALA GLU LYS ALA ALA SEQRES 21 A 501 GLY PHE ILE SER VAL LEU LYS LEU PHE ARG MET ARG SER SEQRES 22 A 501 LEU ARG TRP GLN LEU LEU SER ILE ILE VAL LEU MET GLY SEQRES 23 A 501 GLY GLN GLN LEU SER GLY VAL ASN ALA ILE TYR TYR TYR SEQRES 24 A 501 ALA ASP GLN ILE TYR LEU SER ALA GLY VAL PRO GLU GLU SEQRES 25 A 501 HIS VAL GLN TYR VAL THR ALA GLY THR GLY ALA VAL ASN SEQRES 26 A 501 VAL VAL MET THR PHE CYS ALA VAL PHE VAL VAL GLU LEU SEQRES 27 A 501 LEU GLY ARG ARG LEU LEU LEU LEU LEU GLY PHE SER ILE SEQRES 28 A 501 CYS LEU ILE ALA CYS CYS VAL LEU THR ALA ALA LEU ALA SEQRES 29 A 501 LEU GLN ASP THR VAL SER TRP MET PRO TYR ILE SER ILE SEQRES 30 A 501 VAL CYS VAL ILE SER TYR VAL ILE GLY HIS ALA LEU GLY SEQRES 31 A 501 PRO SER PRO ILE PRO ALA LEU LEU ILE THR GLU ILE PHE SEQRES 32 A 501 LEU GLN SER SER ARG PRO SER ALA PHE MET VAL GLY GLY SEQRES 33 A 501 SER VAL HIS TRP LEU SER ASN PHE THR VAL GLY LEU ILE SEQRES 34 A 501 PHE PRO PHE ILE GLN GLU GLY LEU GLY PRO TYR SER PHE SEQRES 35 A 501 ILE VAL PHE ALA VAL ILE CYS LEU LEU THR THR ILE TYR SEQRES 36 A 501 ILE PHE LEU ILE VAL PRO GLU THR LYS ALA LYS THR PHE SEQRES 37 A 501 ILE GLU ILE ASN GLN ILE PHE THR LYS MET ASN LYS VAL SEQRES 38 A 501 SER GLU VAL TYR PRO GLU LYS GLU GLU LEU LYS GLU LEU SEQRES 39 A 501 PRO PRO VAL THR SER GLU GLN HELIX 1 1 ASP A 5 GLU A 10 1 6 HELIX 2 2 GLY A 11 LEU A 19 1 9 HELIX 3 3 SER A 29 ALA A 37 1 9 HELIX 4 4 VAL A 39 MET A 46 1 8 HELIX 5 5 PHE A 65 PHE A 96 1 32 HELIX 6 6 GLY A 97 SER A 119 1 23 HELIX 7 7 GLU A 126 ALA A 154 1 29 HELIX 8 8 ASN A 157 VAL A 165 1 9 HELIX 9 9 PRO A 166 LEU A 175 1 10 HELIX 10 10 LEU A 175 ASN A 188 1 14 HELIX 11 11 PRO A 193 PHE A 213 1 21 HELIX 12 12 ALA A 259 LYS A 267 1 9 HELIX 13 13 ARG A 270 TYR A 298 1 29 HELIX 14 14 TYR A 316 LEU A 338 1 23 HELIX 15 15 LEU A 343 LEU A 365 1 23 HELIX 16 16 SER A 370 TYR A 383 1 14 HELIX 17 17 VAL A 384 HIS A 387 5 4 HELIX 18 18 SER A 392 THR A 400 1 9 HELIX 19 19 ILE A 402 GLN A 405 5 4 HELIX 20 20 SER A 406 PHE A 430 1 25 HELIX 21 21 GLY A 438 LYS A 480 1 43 HELIX 22 22 GLU A 493 THR A 498 1 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000