PDB Short entry for 1YH7
HEADER    TRANSFERASE                             07-JAN-05   1YH7              
TITLE     THEORETICAL MODEL OF HUMAN GALACTOKINASE                              
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: GALACTOKINASE;                                             
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: GALACTOSE KINASE;                                           
COMPND   5 EC: 2.7.1.6                                                          
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN                                               
KEYWDS    KINASE, GHMP SUPERFAMILY                                              
EXPDTA    THEORETICAL MODEL                                                     
AUTHOR    A.MARABOTTI,A.M.FACCHIANO                                             
REVDAT   1   07-JAN-06 1YH7    0                                                
JRNL        AUTH   A.MARABOTTI,A.M.FACCHIANO                                    
JRNL        TITL   THEORETICAL MODEL OF HUMAN GALACTOKINASE                     
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   1                                                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : MODELLER 6                                           
REMARK   3   AUTHORS     : SALI,BLUNDELL,FISER,SANCHEZ,MARTI-RENOM,             
REMARK   3                 YERKOVICH,BADRETDINOV,MELO,OVERINGTON,FEYFANT        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1YH7 COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998                       
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JAN-2005.                
REMARK 100 THE RCSB ID CODE IS RCSB031507.                                      
REMARK 220                                                                      
REMARK 220 EXPERIMENTAL DETAILS                                                 
REMARK 220  EXPERIMENT TYPE                : THEORETICAL MODELLING              
REMARK 220                                                                      
REMARK 220 REMARK: CREATED BY HOMOLOGY MODELLING PROCEDURE                      
REMARK 225                                                                      
REMARK 225 THEORETICAL MODEL                                                    
REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE.           
REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND                
REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE                   
REMARK 225 RECORDS ARE MEANINGLESS.                                             
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     ALA A     2                                                      
REMARK 465     ALA A     3                                                      
REMARK 465     LEU A     4                                                      
REMARK 465     ARG A     5                                                      
REMARK 465     GLN A     6                                                      
REMARK 465     PRO A     7                                                      
REMARK 465     GLN A     8                                                      
REMARK 465     VAL A     9                                                      
REMARK 465     ALA A    10                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991                                
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    TYR A 116   CA  -  CB  -  CG  ANGL. DEV. =-15.6 DEGREES           
REMARK 500    TYR A 150   CA  -  CB  -  CG  ANGL. DEV. =-18.0 DEGREES           
REMARK 500    ARG A 256   N   -  CA  -  C   ANGL. DEV. =-15.3 DEGREES           
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    SER A 254      143.42     94.05                                   
REMARK 500    CYS A 322      166.59    122.08                                   
DBREF  1YH7 A    1   392  UNP    P51570   GAL1_HUMAN       1    392             
SEQRES   1 A  392  MET ALA ALA LEU ARG GLN PRO GLN VAL ALA GLU LEU LEU          
SEQRES   2 A  392  ALA GLU ALA ARG ARG ALA PHE ARG GLU GLU PHE GLY ALA          
SEQRES   3 A  392  GLU PRO GLU LEU ALA VAL SER ALA PRO GLY ARG VAL ASN          
SEQRES   4 A  392  LEU ILE GLY GLU HIS THR ASP TYR ASN GLN GLY LEU VAL          
SEQRES   5 A  392  LEU PRO MET ALA LEU GLU LEU MET THR VAL LEU VAL GLY          
SEQRES   6 A  392  SER PRO ARG LYS ASP GLY LEU VAL SER LEU LEU THR THR          
SEQRES   7 A  392  SER GLU GLY ALA ASP GLU PRO GLN ARG LEU GLN PHE PRO          
SEQRES   8 A  392  LEU PRO THR ALA GLN ARG SER LEU GLU PRO GLY THR PRO          
SEQRES   9 A  392  ARG TRP ALA ASN TYR VAL LYS GLY VAL ILE GLN TYR TYR          
SEQRES  10 A  392  PRO ALA ALA PRO LEU PRO GLY PHE SER ALA VAL VAL VAL          
SEQRES  11 A  392  SER SER VAL PRO LEU GLY GLY GLY LEU SER SER SER ALA          
SEQRES  12 A  392  SER LEU GLU VAL ALA THR TYR THR PHE LEU GLN GLN LEU          
SEQRES  13 A  392  CYS PRO ASP SER GLY THR ILE ALA ALA ARG ALA GLN VAL          
SEQRES  14 A  392  CYS GLN GLN ALA GLU HIS SER PHE ALA GLY MET PRO CYS          
SEQRES  15 A  392  GLY ILE MET ASP GLN PHE ILE SER LEU MET GLY GLN LYS          
SEQRES  16 A  392  GLY HIS ALA LEU LEU ILE ASP CYS ARG SER LEU GLU THR          
SEQRES  17 A  392  SER LEU VAL PRO LEU SER ASP PRO LYS LEU ALA VAL LEU          
SEQRES  18 A  392  ILE THR ASN SER ASN VAL ARG HIS SER LEU ALA SER SER          
SEQRES  19 A  392  GLU TYR PRO VAL ARG ARG ARG GLN CYS GLU GLU VAL ALA          
SEQRES  20 A  392  ARG ALA LEU GLY LYS GLU SER LEU ARG GLU VAL GLN LEU          
SEQRES  21 A  392  GLU GLU LEU GLU ALA ALA ARG ASP LEU VAL SER LYS GLU          
SEQRES  22 A  392  GLY PHE ARG ARG ALA ARG HIS VAL VAL GLY GLU ILE ARG          
SEQRES  23 A  392  ARG THR ALA GLN ALA ALA ALA ALA LEU ARG ARG GLY ASP          
SEQRES  24 A  392  TYR ARG ALA PHE GLY ARG LEU MET VAL GLU SER HIS ARG          
SEQRES  25 A  392  SER LEU ARG ASP ASP TYR GLU VAL SER CYS PRO GLU LEU          
SEQRES  26 A  392  ASP GLN LEU VAL GLU ALA ALA LEU ALA VAL PRO GLY VAL          
SEQRES  27 A  392  TYR GLY SER ARG MET THR GLY GLY GLY PHE GLY GLY CYS          
SEQRES  28 A  392  THR VAL THR LEU LEU GLU ALA SER ALA ALA PRO HIS ALA          
SEQRES  29 A  392  MET ARG HIS ILE GLN GLU HIS TYR GLY GLY THR ALA THR          
SEQRES  30 A  392  PHE TYR LEU SER GLN ALA ALA ASP GLY ALA LYS VAL LEU          
SEQRES  31 A  392  CYS LEU                                                      
HELIX    1   1 LEU A   12  GLY A   25  1                                  14    
HELIX    2   2 THR A   45  GLN A   49  5                                   5    
HELIX    3   3 PRO A   91  ARG A   97  5                                   7    
HELIX    4   4 ARG A  105  TYR A  117  1                                  13    
HELIX    5   5 PRO A  118  ALA A  120  5                                   3    
HELIX    6   6 SER A  140  CYS A  157  1                                  18    
HELIX    7   7 THR A  162  SER A  176  1                                  15    
HELIX    8   8 ILE A  184  GLY A  193  1                                  10    
HELIX    9   9 SER A  234  GLY A  251  1                                  18    
HELIX   10  10 GLN A  259  ARG A  267  1                                   9    
HELIX   11  11 ASP A  268  VAL A  270  5                                   3    
HELIX   12  12 SER A  271  GLY A  298  1                                  28    
HELIX   13  13 ASP A  299  ASP A  317  1                                  19    
HELIX   14  14 CYS A  322  VAL A  335  1                                  14    
HELIX   15  15 ALA A  360  GLY A  373  1                                  14    
SHEET    1   A 6 GLN A  89  PHE A  90  0                                        
SHEET    2   A 6 VAL A  73  THR A  77 -1  N  VAL A  73   O  PHE A  90           
SHEET    3   A 6 PHE A 125  SER A 131  1  O  ALA A 127   N  SER A  74           
SHEET    4   A 6 LEU A  51  PRO A  67 -1  N  VAL A  62   O  VAL A 130           
SHEET    5   A 6 HIS A 197  ASP A 202 -1  O  LEU A 199   N  PRO A  54           
SHEET    6   A 6 THR A 208  PRO A 212 -1  O  VAL A 211   N  ALA A 198           
SHEET    1   B 6 GLN A  89  PHE A  90  0                                        
SHEET    2   B 6 VAL A  73  THR A  77 -1  N  VAL A  73   O  PHE A  90           
SHEET    3   B 6 PHE A 125  SER A 131  1  O  ALA A 127   N  SER A  74           
SHEET    4   B 6 LEU A  51  PRO A  67 -1  N  VAL A  62   O  VAL A 130           
SHEET    5   B 6 ALA A  31  ILE A  41 -1  N  ALA A  34   O  THR A  61           
SHEET    6   B 6 LYS A 388  LEU A 390 -1  O  LYS A 388   N  SER A  33           
SHEET    1   C 4 VAL A 338  MET A 343  0                                        
SHEET    2   C 4 CYS A 351  GLU A 357 -1  O  VAL A 353   N  ARG A 342           
SHEET    3   C 4 LEU A 218  ASN A 224 -1  N  LEU A 221   O  THR A 354           
SHEET    4   C 4 THR A 377  LEU A 380 -1  O  TYR A 379   N  ILE A 222           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000