PDB Short entry for 1YPK
HEADER    HYDROLASE/HYDROLASE INHIBITOR           31-JAN-05   1YPK              
TITLE     THROMBIN INHIBITOR COMPLEX                                            
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PROTHROMBIN LIGHT CHAIN;                                   
COMPND   3 CHAIN: L;                                                            
COMPND   4 SYNONYM: THROMBIN LIGHT CHAIN;                                       
COMPND   5 EC: 3.4.21.5;                                                        
COMPND   6 MOL_ID: 2;                                                           
COMPND   7 MOLECULE: PROTHROMBIN HEAVY CHAIN;                                   
COMPND   8 CHAIN: H;                                                            
COMPND   9 SYNONYM: THROMBIN HEAVY CHAIN;                                       
COMPND  10 EC: 3.4.21.5;                                                        
COMPND  11 MOL_ID: 3;                                                           
COMPND  12 MOLECULE: 10-MER PEPTIDE FROM ACETY-HIRUDIN(54-65) SULFATED;         
COMPND  13 CHAIN: I;                                                            
COMPND  14 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 TISSUE: BLOOD;                                                       
SOURCE   6 MOL_ID: 2;                                                           
SOURCE   7 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   8 ORGANISM_COMMON: HUMAN;                                              
SOURCE   9 ORGANISM_TAXID: 9606;                                                
SOURCE  10 TISSUE: BLOOD;                                                       
SOURCE  11 MOL_ID: 3;                                                           
SOURCE  12 SYNTHETIC: YES;                                                      
SOURCE  13 ORGANISM_SCIENTIFIC: HIRUDO MEDICINALIS;                             
SOURCE  14 ORGANISM_TAXID: 6421;                                                
SOURCE  15 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY                        
KEYWDS    THROMBIN, INHIBITOR COMPLEX, BARREL, 6 STRANDED BETA-SHEET,           
KEYWDS   2 HYDROLASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX                     
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    P.CZODROWSKI,C.SOTRIFFER,J.FOKKENS,A.HEINE,G.KLEBE                    
REVDAT   6   11-OCT-17 1YPK    1       REMARK                                   
REVDAT   5   13-NOV-13 1YPK    1       ATOM                                     
REVDAT   4   13-JUL-11 1YPK    1       VERSN                                    
REVDAT   3   24-FEB-09 1YPK    1       VERSN                                    
REVDAT   2   07-FEB-06 1YPK    1       JRNL                                     
REVDAT   1   17-JAN-06 1YPK    0                                                
JRNL        AUTH   J.FOKKENS,G.KLEBE                                            
JRNL        TITL   A SIMPLE PROTOCOL TO ESTIMATE DIFFERENCES IN PROTEIN BINDING 
JRNL        TITL 2 AFFINITY FOR ENANTIOMERS WITHOUT PRIOR RESOLUTION OF         
JRNL        TITL 3 RACEMATES                                                    
JRNL        REF    ANGEW.CHEM.INT.ED.ENGL.       V.  45   985 2006              
JRNL        REFN                   ISSN 1433-7851                               
JRNL        PMID   16374786                                                     
JRNL        DOI    10.1002/ANIE.200502302                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.78 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : SHELXL-97                                            
REMARK   3   AUTHORS     : G.M.SHELDRICK                                        
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 10.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 95.1                           
REMARK   3   CROSS-VALIDATION METHOD           : THROUGHOUT                     
REMARK   3   FREE R VALUE TEST SET SELECTION   : RANDOM                         
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (NO CUTOFF).                         
REMARK   3   R VALUE   (WORKING + TEST SET, NO CUTOFF) : 0.184                  
REMARK   3   R VALUE          (WORKING SET, NO CUTOFF) : 0.181                  
REMARK   3   FREE R VALUE                  (NO CUTOFF) : 0.239                  
REMARK   3   FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE TEST SET COUNT   (NO CUTOFF) : 3230                   
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (NO CUTOFF) : 32334                  
REMARK   3                                                                      
REMARK   3  FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F).                     
REMARK   3   R VALUE   (WORKING + TEST SET, F>4SIG(F)) : 0.179                  
REMARK   3   R VALUE          (WORKING SET, F>4SIG(F)) : NULL                   
REMARK   3   FREE R VALUE                  (F>4SIG(F)) : NULL                   
REMARK   3   FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL                   
REMARK   3   FREE R VALUE TEST SET COUNT   (F>4SIG(F)) : NULL                   
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (F>4SIG(F)) : 29383                  
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS      : 2332                                          
REMARK   3   NUCLEIC ACID ATOMS : 0                                             
REMARK   3   HETEROGEN ATOMS    : 42                                            
REMARK   3   SOLVENT ATOMS      : 224                                           
REMARK   3                                                                      
REMARK   3  MODEL REFINEMENT.                                                   
REMARK   3   OCCUPANCY SUM OF NON-HYDROGEN ATOMS      : 2572.7                  
REMARK   3   OCCUPANCY SUM OF HYDROGEN ATOMS          : 2192.7                  
REMARK   3   NUMBER OF DISCRETELY DISORDERED RESIDUES : 0                       
REMARK   3   NUMBER OF LEAST-SQUARES PARAMETERS       : 10410                   
REMARK   3   NUMBER OF RESTRAINTS                     : 9775                    
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM RESTRAINT TARGET VALUES.                        
REMARK   3   BOND LENGTHS                         (A) : 0.023                   
REMARK   3   ANGLE DISTANCES                      (A) : 0.026                   
REMARK   3   SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000                   
REMARK   3   DISTANCES FROM RESTRAINT PLANES      (A) : 0.029                   
REMARK   3   ZERO CHIRAL VOLUMES               (A**3) : 0.043                   
REMARK   3   NON-ZERO CHIRAL VOLUMES           (A**3) : 0.049                   
REMARK   3   ANTI-BUMPING DISTANCE RESTRAINTS     (A) : 0.097                   
REMARK   3   RIGID-BOND ADP COMPONENTS         (A**2) : 0.000                   
REMARK   3   SIMILAR ADP COMPONENTS            (A**2) : 0.075                   
REMARK   3   APPROXIMATELY ISOTROPIC ADPS      (A**2) : 0.000                   
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED: NULL                                                  
REMARK   3                                                                      
REMARK   3  STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER                        
REMARK   3   SPECIAL CASE: NULL                                                 
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: ANISOTROPIC SCALING APPLIED BY THE        
REMARK   3  METHOD OF PARKIN, MOEZZI & HOPE, J.APPL.CRYST.28(1995)53-56         
REMARK   4                                                                      
REMARK   4 1YPK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-FEB-05.                  
REMARK 100 THE DEPOSITION ID IS D_1000031783.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 09-DEC-04                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 7.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU RU300                       
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.5418                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : OSMIC MIRRORS                      
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : RIGAKU RAXIS IV                    
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : R-AXIS                             
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 32334                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.780                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 96.9                               
REMARK 200  DATA REDUNDANCY                : 1.400                              
REMARK 200  R MERGE                    (I) : 0.05000                            
REMARK 200  R SYM                      (I) : 0.05000                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 6.0000                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.81                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 97.4                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 1.40                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.25400                            
REMARK 200  R SYM FOR SHELL            (I) : 0.25400                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 4.200                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: CNS                                                   
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 49.72                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PHOSPHATE BUFFER, SODIUM CHLORIDE, PEG   
REMARK 280  8000, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K       
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       35.44250            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       35.87200            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       35.44250            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       35.87200            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, I                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH H9022  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     TRP H   147A                                                     
REMARK 465     THR H   147B                                                     
REMARK 465     ALA H   147C                                                     
REMARK 465     ASN H   147D                                                     
REMARK 465     VAL H   147E                                                     
REMARK 465     GLY H   147F                                                     
REMARK 465     LYS H   147G                                                     
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ASP H 186A   CG   OD1  OD2                                       
REMARK 470     ARG H 187    N                                                   
REMARK 470     GLN H 239    CG   CD   OE1  NE2                                  
REMARK 470     GLU I   7    CG   CD   OE1  OE2                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    ILE L  14K  C     ILE L  14K  OXT     0.793                       
REMARK 500    LEU I  10   C     LEU I  10   OXT     0.793                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    LEU H  33   CA  -  CB  -  CG  ANGL. DEV. =  15.0 DEGREES          
REMARK 500    TYR H  94   CB  -  CG  -  CD1 ANGL. DEV. =   4.8 DEGREES          
REMARK 500    ARG H 101   NE  -  CZ  -  NH1 ANGL. DEV. =  -3.3 DEGREES          
REMARK 500    ARG H 101   NE  -  CZ  -  NH2 ANGL. DEV. =   3.4 DEGREES          
REMARK 500    ARG H 165   CD  -  NE  -  CZ  ANGL. DEV. =   9.4 DEGREES          
REMARK 500    ARG H 165   NE  -  CZ  -  NH1 ANGL. DEV. =   3.1 DEGREES          
REMARK 500    ARG H 175   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.1 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    PHE L   7      -88.18   -130.19                                   
REMARK 500    TYR H  60A      78.55   -152.96                                   
REMARK 500    ASN H  60G      69.95   -163.14                                   
REMARK 500    HIS H  71      -61.05   -131.60                                   
REMARK 500    GLU H  77       76.86   -100.58                                   
REMARK 500    ILE H  79      -66.60   -132.18                                   
REMARK 500    GLU H  97A     -74.77   -111.20                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 630                                                                      
REMARK 630 MOLECULE TYPE: PEPTIDE-LIKE TRYPSIN INHIBITOR                        
REMARK 630 MOLECULE NAME: [N-[N-(4-METHOXY-2,3,6-TRIMETHYLPHENYLSULFONYL)-L-    
REMARK 630 ASPARTYL]-D-(4-AMIDINO-PHENYLALANYL)]-PIPERIDINE                     
REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 630  SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                           
REMARK 630                                                                      
REMARK 630   M RES C SSSEQI                                                     
REMARK 630     CCR H  5555                                                      
REMARK 630 SOURCE: NULL                                                         
REMARK 630 TAXONOMY: NULL                                                       
REMARK 630 SUBCOMP:    02B ASP APH PIP                                          
REMARK 630 DETAILS: NULL                                                        
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CCR H 5555                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN I OF 10-MER PEPTIDE FROM    
REMARK 800  ACETY-HIRUDIN(54-65) SULFATED                                       
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1K1N   RELATED DB: PDB                                   
REMARK 900 TRYPSIN INHIBITOR COMPLEX WITH THE SAME INHIBITOR                    
DBREF  1YPK L    1B   14K UNP    P00734   THRB_HUMAN     334    360             
DBREF  1YPK H   16   245  UNP    P00734   THRB_HUMAN     364    620             
DBREF  1YPK I    1    10  UNP    P28504   HIR2_HIRME      55     64             
SEQRES   1 L   27  ALA ASP CYS GLY LEU ARG PRO LEU PHE GLU LYS LYS SER          
SEQRES   2 L   27  LEU GLU ASP LYS THR GLU ARG GLU LEU LEU GLU SER TYR          
SEQRES   3 L   27  ILE                                                          
SEQRES   1 H  257  ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO          
SEQRES   2 H  257  TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU          
SEQRES   3 H  257  LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU          
SEQRES   4 H  257  THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS          
SEQRES   5 H  257  ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS          
SEQRES   6 H  257  HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE          
SEQRES   7 H  257  SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN          
SEQRES   8 H  257  TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS          
SEQRES   9 H  257  LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO          
SEQRES  10 H  257  VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU          
SEQRES  11 H  257  GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN          
SEQRES  12 H  257  LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN          
SEQRES  13 H  257  PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU          
SEQRES  14 H  257  ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR          
SEQRES  15 H  257  ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY          
SEQRES  16 H  257  LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO          
SEQRES  17 H  257  PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN          
SEQRES  18 H  257  MET GLY ILE VAL SER TRP GLY GLU GLY CYS ASP ARG ASP          
SEQRES  19 H  257  GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS          
SEQRES  20 H  257  LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE                      
SEQRES   1 I   10  ASP PHE GLU GLU ILE PRO GLU GLU TYS LEU                      
MODRES 1YPK TYS I    9  TYR  O-SULFO-L-TYROSINE                                 
HET    TYS  I   9      16                                                       
HET    CCR  H5555      42                                                       
HETNAM     TYS O-SULFO-L-TYROSINE                                               
HETNAM     CCR [N-[N-(4-METHOXY-2,3,6-TRIMETHYLPHENYLSULFONYL)-L-               
HETNAM   2 CCR  ASPARTYL]-D-(4-AMIDINO-PHENYLALANYL)]-PIPERIDINE                
HETSYN     CCR CRC200 (CHIRON-BEHRING)                                          
FORMUL   3  TYS    C9 H11 N O6 S                                                
FORMUL   4  CCR    C29 H39 N5 O7 S                                              
FORMUL   5  HOH   *224(H2 O)                                                    
HELIX    1   1 PHE L    7  SER L   11  5                                   5    
HELIX    2   2 THR L   14B TYR L   14J 1                                   9    
HELIX    3   3 ALA H   55  CYS H   58  5                                   4    
HELIX    4   4 PRO H   60B ASP H   60E 5                                   4    
HELIX    5   5 THR H   60I ASN H   62  5                                   3    
HELIX    6   6 ASP H  125  LEU H  130  1                                   9    
HELIX    7   7 GLU H  164  SER H  171  1                                   8    
HELIX    8   8 LYS H  185  GLY H  186C 5                                   5    
HELIX    9   9 LEU H  234  PHE H  245  1                                  12    
HELIX   10  10 PRO I    6  LEU I   10  5                                   5    
SHEET    1   A 7 SER H  20  ASP H  21  0                                        
SHEET    2   A 7 GLN H 156  PRO H 161 -1  O  VAL H 157   N  SER H  20           
SHEET    3   A 7 LYS H 135  GLY H 140 -1  N  VAL H 138   O  VAL H 158           
SHEET    4   A 7 PRO H 198  LYS H 202 -1  O  VAL H 200   N  ARG H 137           
SHEET    5   A 7 TRP H 207  TRP H 215 -1  O  TYR H 208   N  MET H 201           
SHEET    6   A 7 GLY H 226  HIS H 230 -1  O  PHE H 227   N  TRP H 215           
SHEET    7   A 7 MET H 180  ALA H 183 -1  N  PHE H 181   O  TYR H 228           
SHEET    1   B 7 GLN H  30  ARG H  35  0                                        
SHEET    2   B 7 GLU H  39  LEU H  46 -1  O  GLU H  39   N  ARG H  35           
SHEET    3   B 7 TRP H  51  THR H  54 -1  O  LEU H  53   N  SER H  45           
SHEET    4   B 7 ALA H 104  LEU H 108 -1  O  ALA H 104   N  THR H  54           
SHEET    5   B 7 LYS H  81  ILE H  90 -1  N  TYR H  89   O  LEU H 105           
SHEET    6   B 7 LEU H  64  ILE H  68 -1  N  ILE H  68   O  LYS H  81           
SHEET    7   B 7 GLN H  30  ARG H  35 -1  N  PHE H  34   O  LEU H  65           
SHEET    1   C 2 LEU H  60  TYR H  60A 0                                        
SHEET    2   C 2 LYS H  60F ASN H  60G-1  O  LYS H  60F  N  TYR H  60A          
SSBOND   1 CYS L    1    CYS H  122                          1555   1555  2.02  
SSBOND   2 CYS H   42    CYS H   58                          1555   1555  2.04  
SSBOND   3 CYS H  168    CYS H  182                          1555   1555  2.03  
SSBOND   4 CYS H  191    CYS H  220                          1555   1555  2.05  
LINK         C   GLU I   8                 N   TYS I   9     1555   1555  1.33  
LINK         C   TYS I   9                 N   LEU I  10     1555   1555  1.32  
CISPEP   1 SER H   36A   PRO H   37          0        -8.37                     
SITE     1 AC1 18 HIS H  57  TYR H  60A TRP H  60D TRP H  96                    
SITE     2 AC1 18 GLU H  97A LEU H  99  ASP H 189  ALA H 190                    
SITE     3 AC1 18 SER H 195  SER H 214  TRP H 215  GLY H 216                    
SITE     4 AC1 18 GLY H 219  CYS H 220  GLY H 226  HOH H9002                    
SITE     5 AC1 18 HOH H9033  HOH H9093                                          
SITE     1 AC2 13 PHE H  34  LEU H  65  ARG H  73  THR H  74                    
SITE     2 AC2 13 ARG H  75  TYR H  76  GLU H  80  LYS H  81                    
SITE     3 AC2 13 ILE H  82  HOH H9046  HOH I9114  HOH I9162                    
SITE     4 AC2 13 HOH I9231                                                     
CRYST1   70.885   71.744   72.274  90.00 100.93  90.00 C 1 2 1       4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.014107  0.000000  0.002724        0.00000                         
SCALE2      0.000000  0.013938  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.014092        0.00000