PDB Short entry for 1YSK HEADER HYDROLASE 08-FEB-05 1YSK TITLE MODELED STRUCTURE OF HUMAN PANCREATIC PHOSPHOLIPASE A2 TITLE 2 BOUND TO A PHOSPHOLIPID MEMBRANE CAVEAT 1YSK CAVEAT ERROR AT CHIRAL CENTER CA OF LYS 10 A, ASP 17 A. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOLIPASE A2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PHOSPHATIDYLCHOLINE 2- ACYLHYDROLASE, GROUP IB COMPND 5 PHOSPHOLIPASE A2; COMPND 6 EC: 3.1.1.4; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: THE ANGULAR ORIENTATION OF THE PROTEIN AT COMPND 9 THE MEMBRANE SURFACE WAS DETERMINED USING A SEMISYNTHETIC COMPND 10 PHOSPHOLIPASE A2 MOLECULE, IN WHICH THE RESIDUES 1-10 WERE COMPND 11 SYNTHETIC, AND THE RESIDUES 11-126 WERE EXPRESSED IN COMPND 12 ESCHERICHIA COLI AND UNIFORMLY 13C-LABELED. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 GENE: PLA2G1B, PLA2, PLA2A; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: BACTERIA; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-21A-IBPLA2 KEYWDS SWISS-MODEL (AUTOMATED PROTEIN MODELLING) EXPDTA THEORETICAL MODEL AUTHOR S.A.TATULIAN REVDAT 1 22-MAR-05 1YSK 0 JRNL AUTH S.A.TATULIAN,S.QIN,A.H.PANDE,X.HE JRNL TITL MODELED STRUCTURE OF HUMAN PANCREATIC JRNL TITL 2 PHOSPHOLIPASE A2 BOUND TO A PHOSPHOLIPID MEMBRANE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.C.PEITSCH REMARK 1 TITL PROTEIN MODELING BY EMAIL REMARK 1 REF BIO/TECHNOLOGY V. 13 658 1995 REMARK 1 REFN ASTM 0733-2 22 ISSN 0733-222X REMARK 1 REFERENCE 2 REMARK 1 AUTH M.C.PEITSCH REMARK 1 TITL PROMOD AND SWISS-MODEL: INTERNET-BASED TOOLS FOR REMARK 1 TITL 2 AUTOMATED COMPARATIVE PROTEIN MODELLING REMARK 1 REF BIOCHEM.SOC.TRANS. V. 24 274 1996 REMARK 1 REFN ASTM BCSTB5 UK ISSN 0300-5127 REMARK 1 REFERENCE 3 REMARK 1 AUTH M.C.PEITSCH,N.GUEX REMARK 1 TITL LARGE-SCALE COMPARATIVE PROTEIN MODELLING. REMARK 1 REF PROTEOME RESEARCH: NEW REMARK 1 REF 2 FRONTIERS IN FUNCTIONAL REMARK 1 REF 3 GENOMICS REMARK 1 REFN US ISSN 3-540-62775-8 REMARK 1 REFERENCE 4 REMARK 1 AUTH M.C.PEITSCH,N.GUEX REMARK 1 TITL SWISS-MODEL AND THE SWISS-PDBVIEWER: AN REMARK 1 TITL 2 ENVIRONMENT FOR COMPARATIVE PROTEIN MODELLING REMARK 1 REF ELECTROPHORESIS V. 18 2714 1997 REMARK 1 REFN GE ISSN 0173-0835 REMARK 1 REFERENCE 5 REMARK 1 AUTH T.SCHWEDE,J.KOPP,N.GUEX,M.C.PEITSCH REMARK 1 TITL SWISS-MODEL: AN AUTOMATED PROTEIN REMARK 1 TITL 2 HOMOLOGY-MODELING SERVER REMARK 1 REF NUCLEIC ACIDS RES. V. 31 3381 2003 REMARK 1 REFN ASTM NARHAD UK ISSN 0305-1048 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1YSK COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 5 REMARK 5 THIS MODEL IS BASED UPON THE COORDINATES OF: REMARK 5 TEMPLATE: 1P2P_ REMARK 5 TARGET : MODEL P04054 REMARK 31 REMARK 31 FILE GENERATED BY SWISS-PDBVIEWER 3.70B17 REMARK 32 REMARK 32 HTTP://WWW.EXPASY.ORG/SPDBV/ REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-FEB-2005. REMARK 100 THE RCSB ID CODE IS RCSB031882. REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: THIS STRUCTURE WAS DETERMINED BY COMBINATION OF REMARK 220 HOMOLOGY MODELING, POLARIZED ATTENUATED TOTAL REFLECTION REMARK 220 FOURIER TRANSFORM INFRARED SPECTROSCOPY, AND MEMBRANE DEPTH- REMARK 220 DEPENDENT TRYPTOPHAN FLUORESCENCE QUENCHING EXPERIMENTS. THE Z REMARK 220 -COORDINATE OF EACH PROTEIN ATOM, IN THIS STRUCTURE, IS THE REMARK 220 DISTANCE FROM THE MEMBRANE CENTER. LIPID ATOMS ARE ENTERED TO REMARK 220 SCHEMATICALLY IDENTIFY THE MEMBRANE CETRAL PLANE BETWEEN THE REMARK 220 TWO LIPID LEAFLETS, THE PLANE OF THE LIPID SN-1 CARBONYL REMARK 220 OXYGENS, AND THE PHOSPHATE GROUP PHOSPHORUS ATOMS. ORIENTATION REMARK 220 OF THE PROTEIN BOUND TO A PHOSPHOLIPID MEMBRANE SUPPORTED ON A REMARK 220 GERMANIUM PLATE WAS DETERMINED IN A D2O-BASED BUFFER REMARK 220 CONTAINING 100 MM NACL, 1 MM NAN3, 1 MM EGTA, 50 MM HEPES (PD REMARK 220 7.4). THE MEMBRANE WAS COMPOSED OF 80 MOL % 1-PALMITOYL-2- REMARK 220 OLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE AND 20 MOL % 1-PALMITOYL-2- REMARK 220 OLEOYL-SN-GLYCERO-3-PHOSPHOGLYCEROL. DEPTH OF MEMBRANE REMARK 220 INSERTION WAS DETERMINED BY TRYPTOPHAN FLUORESCENCE QUENCHING REMARK 220 BY BROMINATED LIPIDS, USING LIPID VESICLES COMPOSED OF 35 MOL REMARK 220 % 1-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 40 MOL % REMARK 220 1-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOGLYCEROL, AND 25 MOL REMARK 220 % 1-PALMITOYL-2-STEAROYL(DIBROMO)-SN-GLYCERO-3-PHOSPHOCHOLINES REMARK 220 BROMINATED AT 6,7, OR 9,10, OR 11,12 POSITIONS.100% D2O WAS REMARK 220 USED IN FTIR EXPERIMENTS, AND 100% H2O WAS USED IN REMARK 220 FLUORESCENCE EXPERIMENTS. THIS ENTRY PRESENTS THE COORDINATES REMARK 220 OF A MEMBRANE-BOUND PROTEIN THAT HAVE BEEN OBTAINED BY REMARK 220 HOMOLOGY MODELING, POLARIZED INTERNAL REFLECTION FTIR AND REMARK 220 FLUORESCENCE EXPERIMENTS, AND ANALYTICAL GEOMETRY ALGORITHMS. REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 CG TYR A 25 P1 UNL 167 0.59 REMARK 500 CZ TYR A 69 P1 UNL 170 0.66 REMARK 500 CA ASP A 66 P1 UNL 162 0.69 REMARK 500 O TRP A 3 O1 UNL 190 0.71 REMARK 500 CB LEU A 65 O1 UNL 162 0.72 REMARK 500 ND2 ASN A 24 O1 UNL 158 0.74 REMARK 500 CG LYS A 121 P1 UNL 138 0.74 REMARK 500 CE1 TYR A 73 P1 UNL 191 0.77 REMARK 500 N ILE A 13 P1 UNL 198 0.80 REMARK 500 N TYR A 69 P1 UNL 171 0.80 REMARK 500 OG SER A 74 P1 UNL 202 0.80 REMARK 500 CG HIS A 71 P1 UNL 182 0.83 REMARK 500 CG LYS A 10 O1 UNL 198 0.86 REMARK 500 CD2 TYR A 25 P1 UNL 167 0.86 REMARK 500 C LYS A 121 P1 UNL 137 0.94 REMARK 500 C VAL A 2 O1 UNL 180 1.00 REMARK 500 CB SER A 74 P1 UNL 202 1.00 REMARK 500 CA CYS A 77 P1 UNL 210 1.00 REMARK 500 NZ LYS A 62 P1 UNL 163 1.03 REMARK 500 N LYS A 122 P1 UNL 137 1.03 REMARK 500 CE2 TYR A 69 P1 UNL 170 1.04 REMARK 500 NZ LYS A 10 O1 UNL 188 1.05 REMARK 500 OG SER A 78 P1 UNL 220 1.06 REMARK 500 N TYR A 75 P1 UNL 201 1.07 REMARK 500 CG ASN A 24 O1 UNL 158 1.09 REMARK 500 OG1 THR A 70 O1 UNL 172 1.10 REMARK 500 CA TYR A 73 P1 UNL 192 1.12 REMARK 500 CB SER A 76 P1 UNL 211 1.12 REMARK 500 CA ILE A 13 P1 UNL 198 1.13 REMARK 500 CE2 TYR A 75 P1 UNL 200 1.19 REMARK 500 N CYS A 77 P1 UNL 210 1.19 REMARK 500 CB CYS A 11 P1 UNL 199 1.21 REMARK 500 CG LYS A 122 P1 UNL 136 1.23 REMARK 500 CD ARG A 6 O1 UNL 179 1.24 REMARK 500 C PRO A 68 P1 UNL 171 1.25 REMARK 500 CA TYR A 75 P1 UNL 201 1.26 REMARK 500 C CYS A 77 P1 UNL 210 1.28 REMARK 500 CB ALA A 1 O1 UNL 181 1.29 REMARK 500 CD1 TYR A 73 P1 UNL 191 1.29 REMARK 500 CD LYS A 122 P1 UNL 136 1.29 REMARK 500 CD2 TYR A 111 P1 UNL 177 1.30 REMARK 500 CG2 THR A 120 P1 UNL 148 1.30 REMARK 500 NE ARG A 6 O1 UNL 179 1.31 REMARK 500 CB CYS A 29 P1 UNL 168 1.31 REMARK 500 CE2 TYR A 111 P1 UNL 177 1.36 REMARK 500 O ASN A 112 P1 UNL 166 1.36 REMARK 500 O GLY A 30 P1 UNL 159 1.39 REMARK 500 N ASP A 66 P1 UNL 162 1.44 REMARK 500 N ILE A 9 P1 UNL 189 1.45 REMARK 500 CB ASN A 23 O1 UNL 168 1.45 REMARK 500 CG TYR A 22 P1 UNL 178 1.46 REMARK 500 O VAL A 2 O1 UNL 180 1.47 REMARK 500 C ASN A 23 O1 UNL 168 1.48 REMARK 500 CZ TYR A 73 P1 UNL 191 1.48 REMARK 500 CD1 TYR A 111 P1 UNL 176 1.50 REMARK 500 CE2 PHE A 5 P1 UNL 179 1.51 REMARK 500 CD2 HIS A 71 P1 UNL 182 1.51 REMARK 500 ND1 HIS A 71 P1 UNL 182 1.52 REMARK 500 CA ASN A 23 O1 UNL 168 1.55 REMARK 500 O LYS A 121 P1 UNL 137 1.55 REMARK 500 N THR A 120 P1 UNL 147 1.56 REMARK 500 CG ARG A 6 O1 UNL 179 1.58 REMARK 500 CG LYS A 7 O1 UNL 200 1.58 REMARK 500 CA GLY A 15 O1 UNL 197 1.60 REMARK 500 C TRP A 3 O1 UNL 190 1.63 REMARK 500 OG SER A 76 P1 UNL 211 1.63 REMARK 500 CE1 TYR A 69 P1 UNL 170 1.64 REMARK 500 CB HIS A 71 P1 UNL 182 1.64 REMARK 500 CG ASN A 117 O1 UNL 157 1.64 REMARK 500 CD PRO A 18 O1 UNL 188 1.65 REMARK 500 CA GLU A 21 O1 UNL 177 1.65 REMARK 500 CA ASN A 117 O1 UNL 157 1.66 REMARK 500 CE LYS A 62 P1 UNL 163 1.67 REMARK 500 CZ PHE A 5 P1 UNL 179 1.69 REMARK 500 CA CYS A 11 P1 UNL 199 1.69 REMARK 500 ND2 ASN A 117 O1 UNL 157 1.69 REMARK 500 C ILE A 13 P1 UNL 198 1.70 REMARK 500 CB TYR A 22 P1 UNL 178 1.70 REMARK 500 CD1 LEU A 31 O1 UNL 160 1.70 REMARK 500 CD LYS A 10 O1 UNL 198 1.71 REMARK 500 C PRO A 18 O1 UNL 178 1.71 REMARK 500 N PRO A 18 O1 UNL 188 1.72 REMARK 500 CB ASN A 117 O1 UNL 157 1.73 REMARK 500 CG LEU A 65 O1 UNL 162 1.75 REMARK 500 C GLY A 15 O1 UNL 197 1.77 REMARK 500 N GLY A 26 P1 UNL 157 1.77 REMARK 500 CD1 TYR A 25 P1 UNL 167 1.78 REMARK 500 O LYS A 62 P1 UNL 173 1.79 REMARK 500 OH TYR A 69 P1 UNL 170 1.79 REMARK 500 CD2 TYR A 75 P1 UNL 200 1.79 REMARK 500 C VAL A 12 P1 UNL 198 1.80 REMARK 500 ND2 ASN A 67 O1 UNL 161 1.80 REMARK 500 NZ LYS A 10 OG SER A 16 1.81 REMARK 500 CB TYR A 75 P1 UNL 201 1.81 REMARK 500 O TYR A 22 P1 UNL 168 1.82 REMARK 500 OD1 ASN A 24 O1 UNL 158 1.82 REMARK 500 CB TYR A 25 P1 UNL 167 1.82 REMARK 500 N TYR A 73 P1 UNL 192 1.82 REMARK 500 CD LYS A 121 P1 UNL 138 1.82 REMARK 500 O ASN A 23 O1 UNL 168 1.84 REMARK 500 CA VAL A 2 O1 UNL 180 1.85 REMARK 500 N PHE A 19 O1 UNL 178 1.86 REMARK 500 O CYS A 77 P1 UNL 210 1.86 REMARK 500 C ASP A 66 P1 UNL 162 1.87 REMARK 500 C ASP A 119 P1 UNL 147 1.87 REMARK 500 N TRP A 3 O1 UNL 180 1.88 REMARK 500 CG1 ILE A 9 P1 UNL 189 1.88 REMARK 500 CE LYS A 10 OD1 ASP A 17 1.89 REMARK 500 CE LYS A 10 O1 UNL 198 1.89 REMARK 500 CA PRO A 68 P1 UNL 171 1.89 REMARK 500 C TYR A 75 P1 UNL 201 1.89 REMARK 500 CB SER A 78 P1 UNL 220 1.89 REMARK 500 CA LYS A 122 P1 UNL 137 1.89 REMARK 500 C LEU A 31 P1 UNL 159 1.90 REMARK 500 O TYR A 111 P1 UNL 176 1.90 REMARK 500 CA THR A 120 P1 UNL 147 1.91 REMARK 500 CA ILE A 9 P1 UNL 189 1.92 REMARK 500 C GLY A 30 P1 UNL 159 1.92 REMARK 500 CB PHE A 5 P1 UNL 180 1.93 REMARK 500 CG GLN A 4 O1 UNL 191 1.94 REMARK 500 CG2 ILE A 9 P1 UNL 188 1.95 REMARK 500 O CYS A 29 P1 UNL 158 1.95 REMARK 500 O THR A 72 P1 UNL 192 1.95 REMARK 500 CB LYS A 121 P1 UNL 138 1.96 REMARK 500 O GLY A 15 O1 UNL 197 1.97 REMARK 500 O PRO A 18 O1 UNL 178 1.97 REMARK 500 CG PRO A 14 P1 UNL 208 1.99 REMARK 500 CE2 TYR A 25 P1 UNL 167 1.99 REMARK 500 CE LYS A 116 O1 UNL 166 1.99 REMARK 500 C ARG A 6 O1 UNL 189 2.00 REMARK 500 CD2 TYR A 69 P1 UNL 170 2.00 REMARK 500 N HIS A 115 P1 UNL 166 2.00 REMARK 500 SG CYS A 77 P1 UNL 209 2.01 REMARK 500 CA LEU A 31 P1 UNL 159 2.02 REMARK 500 CG LYS A 116 O1 UNL 167 2.03 REMARK 500 N CYS A 11 P1 UNL 199 2.04 REMARK 500 CG GLU A 21 O1 UNL 177 2.04 REMARK 500 CD1 ILE A 13 P1 UNL 188 2.05 REMARK 500 C LYS A 113 P1 UNL 166 2.05 REMARK 500 O ALA A 114 P1 UNL 156 2.05 REMARK 500 NZ LYS A 10 C SER A 16 2.06 REMARK 500 CB ASP A 66 P1 UNL 162 2.06 REMARK 500 O MET A 8 P1 UNL 199 2.07 REMARK 500 N ASP A 17 O1 UNL 188 2.07 REMARK 500 O ARG A 6 O1 UNL 189 2.08 REMARK 500 C ASP A 17 O1 UNL 188 2.08 REMARK 500 CD GLU A 21 O1 UNL 187 2.08 REMARK 500 CA GLY A 26 P1 UNL 157 2.08 REMARK 500 CA HIS A 71 P1 UNL 182 2.08 REMARK 500 CG TYR A 75 P1 UNL 201 2.08 REMARK 500 CE1 HIS A 71 P1 UNL 182 2.09 REMARK 500 N GLY A 32 P1 UNL 159 2.10 REMARK 500 CG TYR A 73 P1 UNL 191 2.10 REMARK 500 CD1 TYR A 75 P1 UNL 201 2.10 REMARK 500 C SER A 76 P1 UNL 210 2.10 REMARK 500 CD2 TYR A 123 P1 UNL 146 2.10 REMARK 500 NZ LYS A 10 CD PRO A 18 2.11 REMARK 500 N GLU A 21 O1 UNL 177 2.11 REMARK 500 N GLY A 79 P1 UNL 219 2.11 REMARK 500 CE LYS A 7 O1 UNL 200 2.12 REMARK 500 CG ASN A 23 O1 UNL 168 2.12 REMARK 500 CA LEU A 65 O1 UNL 162 2.12 REMARK 500 CD1 TYR A 22 P1 UNL 178 2.13 REMARK 500 C THR A 72 P1 UNL 192 2.13 REMARK 500 OE2 GLU A 21 O1 UNL 187 2.15 REMARK 500 CB PHE A 63 P1 UNL 172 2.15 REMARK 500 CB GLU A 21 O1 UNL 177 2.16 REMARK 500 N PRO A 68 P1 UNL 171 2.16 REMARK 500 CG MET A 8 P1 UNL 190 2.17 REMARK 500 NE2 HIS A 71 P1 UNL 182 2.17 REMARK 500 N LEU A 31 P1 UNL 159 2.18 REMARK 500 C ASN A 112 P1 UNL 166 2.18 REMARK 500 CB ALA A 114 P1 UNL 165 2.19 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 10 CE LYS A 10 NZ 0.960 REMARK 500 CYS A 61 C CYS A 61 O 3.391 REMARK 500 LYS A 116 CE LYS A 116 NZ 0.960 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 3 CA - CB - CG ANGL. DEV. = 30.5 DEGREES REMARK 500 ARG A 6 CB - CA - C ANGL. DEV. = 50.8 DEGREES REMARK 500 ARG A 6 N - CA - CB ANGL. DEV. =-44.1 DEGREES REMARK 500 LYS A 10 N - CA - CB ANGL. DEV. = 52.8 DEGREES REMARK 500 LYS A 10 CA - CB - CG ANGL. DEV. = 29.5 DEGREES REMARK 500 LYS A 10 CG - CD - CE ANGL. DEV. =-34.8 DEGREES REMARK 500 LYS A 10 CD - CE - NZ ANGL. DEV. =-39.4 DEGREES REMARK 500 ASP A 17 CB - CA - C ANGL. DEV. = 36.1 DEGREES REMARK 500 ASP A 17 N - CA - CB ANGL. DEV. =-30.2 DEGREES REMARK 500 CYS A 29 CB - CA - C ANGL. DEV. =-31.2 DEGREES REMARK 500 LYS A 116 CG - CD - CE ANGL. DEV. =-34.8 DEGREES REMARK 500 LYS A 116 CD - CE - NZ ANGL. DEV. =-39.4 DEGREES REMARK 600 REMARK 600 HETEROGEN REMARK 600 THIS FILE CONTAINS THE COORDINATES OF A MEMBRANE- REMARK 600 BOUND PROTEIN. REMARK 600 UNL IS AN ARTIFICIALLY ADDED ARRAY OF ATOMS, REMARK 600 MEANT TO DISPLAY WHERE THE LIPID REMARK 600 TERMINAL METHYL GROUP CARBON (C) ATOMS, REMARK 600 CARBONYL OXYGENS (O), AND PHOSPHATE REMARK 600 GROUP PHOSPHOROUS (P) ATOMS ARE. REMARK 600 THE FULL NAME OF THE COMPOUND IS REMARK 600 1-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE. DBREF 1YSK A 1 124 UNP P04054 PA21_HUMAN 23 146 SEQRES 1 A 124 ALA VAL TRP GLN PHE ARG LYS MET ILE LYS CYS VAL ILE SEQRES 2 A 124 PRO GLY SER ASP PRO PHE LEU GLU TYR ASN ASN TYR GLY SEQRES 3 A 124 CYS TYR CYS GLY LEU GLY GLY SER GLY THR PRO VAL ASP SEQRES 4 A 124 GLU LEU ASP LYS CYS CYS GLN THR HIS ASP ASN CYS TYR SEQRES 5 A 124 ASP GLN ALA LYS LYS LEU ASP SER CYS LYS PHE LEU LEU SEQRES 6 A 124 ASP ASN PRO TYR THR HIS THR TYR SER TYR SER CYS SER SEQRES 7 A 124 GLY SER ALA ILE THR CYS SER SER LYS ASN LYS GLU CYS SEQRES 8 A 124 GLU ALA PHE ILE CYS ASN CYS ASP ARG ASN ALA ALA ILE SEQRES 9 A 124 CYS PHE SER LYS ALA PRO TYR ASN LYS ALA HIS LYS ASN SEQRES 10 A 124 LEU ASP THR LYS LYS TYR CYS HET UNL 125 3 HET UNL 126 3 HET UNL 127 3 HET UNL 128 3 HET UNL 129 3 HET UNL 130 3 HET UNL 131 3 HET UNL 132 3 HET UNL 133 3 HET UNL 134 3 HET UNL 135 3 HET UNL 136 3 HET UNL 137 3 HET UNL 138 3 HET UNL 139 3 HET UNL 140 3 HET UNL 141 3 HET UNL 142 3 HET UNL 143 3 HET UNL 144 3 HET UNL 145 3 HET UNL 146 3 HET UNL 147 3 HET UNL 148 3 HET UNL 149 3 HET UNL 150 3 HET UNL 151 3 HET UNL 152 3 HET UNL 153 3 HET UNL 154 3 HET UNL 155 3 HET UNL 156 3 HET UNL 157 3 HET UNL 158 3 HET UNL 159 3 HET UNL 160 3 HET UNL 161 3 HET UNL 162 3 HET UNL 163 3 HET UNL 164 3 HET UNL 165 3 HET UNL 166 3 HET UNL 167 3 HET UNL 168 3 HET UNL 169 3 HET UNL 170 3 HET UNL 171 3 HET UNL 172 3 HET UNL 173 3 HET UNL 174 3 HET UNL 175 3 HET UNL 176 3 HET UNL 177 3 HET UNL 178 3 HET UNL 179 3 HET UNL 180 3 HET UNL 181 3 HET UNL 182 3 HET UNL 183 3 HET UNL 184 3 HET UNL 185 3 HET UNL 186 3 HET UNL 187 3 HET UNL 188 3 HET UNL 189 3 HET UNL 190 3 HET UNL 191 3 HET UNL 192 3 HET UNL 193 3 HET UNL 194 3 HET UNL 195 3 HET UNL 196 3 HET UNL 197 3 HET UNL 198 3 HET UNL 199 3 HET UNL 200 3 HET UNL 201 3 HET UNL 202 3 HET UNL 203 3 HET UNL 204 3 HET UNL 205 3 HET UNL 206 3 HET UNL 207 3 HET UNL 208 3 HET UNL 209 3 HET UNL 210 3 HET UNL 211 3 HET UNL 212 3 HET UNL 213 3 HET UNL 214 3 HET UNL 215 3 HET UNL 216 3 HET UNL 217 3 HET UNL 218 3 HET UNL 219 3 HET UNL 220 3 HET UNL 221 3 HET UNL 222 3 HET UNL 223 3 HET UNL 224 3 HET UNL 225 3 HET UNL 226 3 HET UNL 227 3 HET UNL 228 3 HET UNL 229 3 HET UNL 230 3 HET UNL 231 3 HET UNL 232 3 HET UNL 233 3 HET UNL 234 3 HETNAM UNL UNKNOWN LIGAND HELIX 1 1 ALA A 1 ILE A 13 1 13 HELIX 2 2 ASP A 39 LEU A 58 1 20 HELIX 3 3 PHE A 63 HIS A 71 5 9 HELIX 4 4 LYS A 89 LYS A 108 1 20 HELIX 5 5 ASN A 112 LYS A 116 5 5 SHEET 1 A 2 TYR A 75 CYS A 77 0 SHEET 2 A 2 ILE A 82 CYS A 84 -1 O THR A 83 N SER A 76 SSBOND 1 CYS A 11 CYS A 77 SSBOND 2 CYS A 27 CYS A 124 SSBOND 3 CYS A 29 CYS A 45 SSBOND 4 CYS A 44 CYS A 105 SSBOND 5 CYS A 51 CYS A 98 SSBOND 6 CYS A 61 CYS A 91 SSBOND 7 CYS A 84 CYS A 96 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000