PDB Short entry for 1Z8D HEADER TRANSFERASE 30-MAR-05 1Z8D TITLE CRYSTAL STRUCTURE OF HUMAN MUSCLE GLYCOGEN PHOSPHORYLASE A WITH AMP TITLE 2 AND GLUCOSE CAVEAT 1Z8D SEP A 14 HAS WRONG CHIRALITY AT ATOM CA COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOGEN PHOSPHORYLASE, MUSCLE FORM; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MYOPHOSPHORYLASE; COMPND 5 EC: 2.4.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PYGM; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: VIRUS; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PFASTBAC KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.M.LUKACS,N.G.OIKONOMAKOS,R.L.CROWTHER,L.N.HONG,R.U.KAMMLOTT, AUTHOR 2 W.LEVIN,S.LI,C.M.LIU,D.LUCAS-MCGADY,S.PIETRANICO,L.REIK REVDAT 8 15-NOV-23 1Z8D 1 REMARK REVDAT 7 23-AUG-23 1Z8D 1 REMARK REVDAT 6 20-OCT-21 1Z8D 1 SEQADV HETSYN REVDAT 5 29-JUL-20 1Z8D 1 CAVEAT COMPND REMARK HETNAM REVDAT 5 2 1 LINK SITE REVDAT 4 13-JUL-11 1Z8D 1 VERSN REVDAT 3 24-FEB-09 1Z8D 1 VERSN REVDAT 2 23-MAY-06 1Z8D 1 JRNL REVDAT 1 21-MAR-06 1Z8D 0 JRNL AUTH C.M.LUKACS,N.G.OIKONOMAKOS,R.L.CROWTHER,L.N.HONG, JRNL AUTH 2 R.U.KAMMLOTT,W.LEVIN,S.LI,C.M.LIU,D.LUCAS-MCGADY, JRNL AUTH 3 S.PIETRANICO,L.REIK JRNL TITL THE CRYSTAL STRUCTURE OF HUMAN MUSCLE GLYCOGEN PHOSPHORYLASE JRNL TITL 2 A WITH BOUND GLUCOSE AND AMP: AN INTERMEDIATE CONFORMATION JRNL TITL 3 WITH T-STATE AND R-STATE FEATURES. JRNL REF PROTEINS V. 63 1123 2006 JRNL REFN ISSN 0887-3585 JRNL PMID 16523484 JRNL DOI 10.1002/PROT.20939 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNX 2000.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN,MOLECULAR REMARK 3 : SIMULATIONS (BADGER,BERARD,KUMAR,SZALMA, REMARK 3 : YIP,DZAKULA) REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 3316479.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 35334 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 706 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 35334 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5734 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 1.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 107 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6707 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 369 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.95000 REMARK 3 B22 (A**2) : -1.38000 REMARK 3 B33 (A**2) : -2.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.17 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.31 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.950 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.140 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.740 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.910 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.710 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 35.48 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 4 : AMP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 4 : AMP.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1Z8D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000032426. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X8C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36521 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.280 REMARK 200 RESOLUTION RANGE LOW (A) : 76.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.20100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 7GPB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG MME 550, GLUCOSE, TRIS, SPERMINE, REMARK 280 DTT, PH 6.9, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 46.18500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 72.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.18500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 72.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE SECOND MOLECULE OF THE BIOLOGICAL ASSEMBLY IS GENERATED REMARK 300 BY THE OPERATION 1-X, -Y, Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 9600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 92.37000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 465 LEU A 18 REMARK 465 ALA A 19 REMARK 465 GLY A 20 REMARK 465 ASN A 250 REMARK 465 ASP A 251 REMARK 465 PHE A 252 REMARK 465 ASN A 253 REMARK 465 LEU A 254 REMARK 465 LYS A 255 REMARK 465 ASP A 256 REMARK 465 PHE A 257 REMARK 465 ASN A 258 REMARK 465 VAL A 259 REMARK 465 GLY A 260 REMARK 465 PRO A 837 REMARK 465 ASP A 838 REMARK 465 GLU A 839 REMARK 465 ALA A 840 REMARK 465 ILE A 841 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN A 270 ND2 ASN A 270 2655 1.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 3 109.06 -56.10 REMARK 500 ILE A 13 83.99 -66.90 REMARK 500 ALA A 129 73.15 -100.08 REMARK 500 LEU A 131 48.67 -86.98 REMARK 500 TYR A 203 -139.19 61.06 REMARK 500 PRO A 281 30.93 -74.63 REMARK 500 ASP A 339 -171.34 69.55 REMARK 500 ALA A 456 149.01 -170.27 REMARK 500 THR A 466 -105.03 -113.09 REMARK 500 ASN A 484 173.97 -55.69 REMARK 500 LEU A 492 -62.25 -157.01 REMARK 500 ASP A 514 70.65 -166.83 REMARK 500 PRO A 559 1.21 -34.38 REMARK 500 LYS A 568 166.44 172.81 REMARK 500 GLU A 593 78.07 -115.40 REMARK 500 ASP A 638 38.48 -98.58 REMARK 500 SER A 674 -59.76 -155.42 REMARK 500 PHE A 709 73.20 -111.56 REMARK 500 SER A 751 64.91 -161.66 REMARK 500 HIS A 768 59.73 -149.05 REMARK 500 ILE A 824 -53.56 -125.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GPA RELATED DB: PDB REMARK 900 RELATED ID: 7GPB RELATED DB: PDB REMARK 900 RELATED ID: 3AMV RELATED DB: PDB REMARK 900 RELATED ID: 1FA9 RELATED DB: PDB DBREF 1Z8D A 0 841 UNP P11217 PYGM_HUMAN 1 842 SEQADV 1Z8D SEP A 14 UNP P11217 SER 15 ENGINEERED MUTATION SEQADV 1Z8D LLP A 680 UNP P11217 LYS 681 ENGINEERED MUTATION SEQRES 1 A 842 MET SER ARG PRO LEU SER ASP GLN GLU LYS ARG LYS GLN SEQRES 2 A 842 ILE SEP VAL ARG GLY LEU ALA GLY VAL GLU ASN VAL THR SEQRES 3 A 842 GLU LEU LYS LYS ASN PHE ASN ARG HIS LEU HIS PHE THR SEQRES 4 A 842 LEU VAL LYS ASP ARG ASN VAL ALA THR PRO ARG ASP TYR SEQRES 5 A 842 TYR PHE ALA LEU ALA HIS THR VAL ARG ASP HIS LEU VAL SEQRES 6 A 842 GLY ARG TRP ILE ARG THR GLN GLN HIS TYR TYR GLU LYS SEQRES 7 A 842 ASP PRO LYS ARG ILE TYR TYR LEU SER LEU GLU PHE TYR SEQRES 8 A 842 MET GLY ARG THR LEU GLN ASN THR MET VAL ASN LEU ALA SEQRES 9 A 842 LEU GLU ASN ALA CYS ASP GLU ALA THR TYR GLN LEU GLY SEQRES 10 A 842 LEU ASP MET GLU GLU LEU GLU GLU ILE GLU GLU ASP ALA SEQRES 11 A 842 GLY LEU GLY ASN GLY GLY LEU GLY ARG LEU ALA ALA CYS SEQRES 12 A 842 PHE LEU ASP SER MET ALA THR LEU GLY LEU ALA ALA TYR SEQRES 13 A 842 GLY TYR GLY ILE ARG TYR GLU PHE GLY ILE PHE ASN GLN SEQRES 14 A 842 LYS ILE SER GLY GLY TRP GLN MET GLU GLU ALA ASP ASP SEQRES 15 A 842 TRP LEU ARG TYR GLY ASN PRO TRP GLU LYS ALA ARG PRO SEQRES 16 A 842 GLU PHE THR LEU PRO VAL HIS PHE TYR GLY HIS VAL GLU SEQRES 17 A 842 HIS THR SER GLN GLY ALA LYS TRP VAL ASP THR GLN VAL SEQRES 18 A 842 VAL LEU ALA MET PRO TYR ASP THR PRO VAL PRO GLY TYR SEQRES 19 A 842 ARG ASN ASN VAL VAL ASN THR MET ARG LEU TRP SER ALA SEQRES 20 A 842 LYS ALA PRO ASN ASP PHE ASN LEU LYS ASP PHE ASN VAL SEQRES 21 A 842 GLY GLY TYR ILE GLN ALA VAL LEU ASP ARG ASN LEU ALA SEQRES 22 A 842 GLU ASN ILE SER ARG VAL LEU TYR PRO ASN ASP ASN PHE SEQRES 23 A 842 PHE GLU GLY LYS GLU LEU ARG LEU LYS GLN GLU TYR PHE SEQRES 24 A 842 VAL VAL ALA ALA THR LEU GLN ASP ILE ILE ARG ARG PHE SEQRES 25 A 842 LYS SER SER LYS PHE GLY CYS ARG ASP PRO VAL ARG THR SEQRES 26 A 842 ASN PHE ASP ALA PHE PRO ASP LYS VAL ALA ILE GLN LEU SEQRES 27 A 842 ASN ASP THR HIS PRO SER LEU ALA ILE PRO GLU LEU MET SEQRES 28 A 842 ARG ILE LEU VAL ASP LEU GLU ARG MET ASP TRP ASP LYS SEQRES 29 A 842 ALA TRP ASP VAL THR VAL ARG THR CYS ALA TYR THR ASN SEQRES 30 A 842 HIS THR VAL LEU PRO GLU ALA LEU GLU ARG TRP PRO VAL SEQRES 31 A 842 HIS LEU LEU GLU THR LEU LEU PRO ARG HIS LEU GLN ILE SEQRES 32 A 842 ILE TYR GLU ILE ASN GLN ARG PHE LEU ASN ARG VAL ALA SEQRES 33 A 842 ALA ALA PHE PRO GLY ASP VAL ASP ARG LEU ARG ARG MET SEQRES 34 A 842 SER LEU VAL GLU GLU GLY ALA VAL LYS ARG ILE ASN MET SEQRES 35 A 842 ALA HIS LEU CYS ILE ALA GLY SER HIS ALA VAL ASN GLY SEQRES 36 A 842 VAL ALA ARG ILE HIS SER GLU ILE LEU LYS LYS THR ILE SEQRES 37 A 842 PHE LYS ASP PHE TYR GLU LEU GLU PRO HIS LYS PHE GLN SEQRES 38 A 842 ASN LYS THR ASN GLY ILE THR PRO ARG ARG TRP LEU VAL SEQRES 39 A 842 LEU CYS ASN PRO GLY LEU ALA GLU VAL ILE ALA GLU ARG SEQRES 40 A 842 ILE GLY GLU ASP PHE ILE SER ASP LEU ASP GLN LEU ARG SEQRES 41 A 842 LYS LEU LEU SER PHE VAL ASP ASP GLU ALA PHE ILE ARG SEQRES 42 A 842 ASP VAL ALA LYS VAL LYS GLN GLU ASN LYS LEU LYS PHE SEQRES 43 A 842 ALA ALA TYR LEU GLU ARG GLU TYR LYS VAL HIS ILE ASN SEQRES 44 A 842 PRO ASN SER LEU PHE ASP ILE GLN VAL LYS ARG ILE HIS SEQRES 45 A 842 GLU TYR LYS ARG GLN LEU LEU ASN CYS LEU HIS VAL ILE SEQRES 46 A 842 THR LEU TYR ASN ARG ILE LYS ARG GLU PRO ASN LYS PHE SEQRES 47 A 842 PHE VAL PRO ARG THR VAL MET ILE GLY GLY LYS ALA ALA SEQRES 48 A 842 PRO GLY TYR HIS MET ALA LYS MET ILE ILE ARG LEU VAL SEQRES 49 A 842 THR ALA ILE GLY ASP VAL VAL ASN HIS ASP PRO ALA VAL SEQRES 50 A 842 GLY ASP ARG LEU ARG VAL ILE PHE LEU GLU ASN TYR ARG SEQRES 51 A 842 VAL SER LEU ALA GLU LYS VAL ILE PRO ALA ALA ASP LEU SEQRES 52 A 842 SER GLU GLN ILE SER THR ALA GLY THR GLU ALA SER GLY SEQRES 53 A 842 THR GLY ASN MET LLP PHE MET LEU ASN GLY ALA LEU THR SEQRES 54 A 842 ILE GLY THR MET ASP GLY ALA ASN VAL GLU MET ALA GLU SEQRES 55 A 842 GLU ALA GLY GLU GLU ASN PHE PHE ILE PHE GLY MET ARG SEQRES 56 A 842 VAL GLU ASP VAL ASP LYS LEU ASP GLN ARG GLY TYR ASN SEQRES 57 A 842 ALA GLN GLU TYR TYR ASP ARG ILE PRO GLU LEU ARG GLN SEQRES 58 A 842 VAL ILE GLU GLN LEU SER SER GLY PHE PHE SER PRO LYS SEQRES 59 A 842 GLN PRO ASP LEU PHE LYS ASP ILE VAL ASN MET LEU MET SEQRES 60 A 842 HIS HIS ASP ARG PHE LYS VAL PHE ALA ASP TYR GLU ASP SEQRES 61 A 842 TYR ILE LYS CYS GLN GLU LYS VAL SER ALA LEU TYR LYS SEQRES 62 A 842 ASN PRO ARG GLU TRP THR ARG MET VAL ILE ARG ASN ILE SEQRES 63 A 842 ALA THR SER GLY LYS PHE SER SER ASP ARG THR ILE ALA SEQRES 64 A 842 GLN TYR ALA ARG GLU ILE TRP GLY VAL GLU PRO SER ARG SEQRES 65 A 842 GLN ARG LEU PRO ALA PRO ASP GLU ALA ILE MODRES 1Z8D SEP A 14 SER PHOSPHOSERINE MODRES 1Z8D LLP A 680 LYS HET SEP A 14 10 HET LLP A 680 24 HET GLC A 901 12 HET AMP A 900 23 HET ADE A 902 10 HETNAM SEP PHOSPHOSERINE HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM ADE ADENINE HETSYN SEP PHOSPHONOSERINE HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 1 SEP C3 H8 N O6 P FORMUL 1 LLP C14 H22 N3 O7 P FORMUL 2 GLC C6 H12 O6 FORMUL 3 AMP C10 H14 N5 O7 P FORMUL 4 ADE C5 H5 N5 FORMUL 5 HOH *369(H2 O) HELIX 1 1 SER A 5 ARG A 10 1 6 HELIX 2 2 LYS A 11 ILE A 13 5 3 HELIX 3 3 ASN A 23 THR A 38 1 16 HELIX 4 4 THR A 47 ASP A 78 1 32 HELIX 5 5 THR A 94 LEU A 102 1 9 HELIX 6 6 LEU A 104 GLN A 114 1 11 HELIX 7 7 ASP A 118 GLU A 126 1 9 HELIX 8 8 GLY A 134 LEU A 150 1 17 HELIX 9 9 PRO A 194 THR A 197 5 4 HELIX 10 10 GLY A 261 ASN A 270 1 10 HELIX 11 11 LEU A 271 ARG A 277 5 7 HELIX 12 12 LYS A 289 SER A 313 1 25 HELIX 13 13 ALA A 328 LYS A 332 1 5 HELIX 14 14 LEU A 344 LEU A 356 1 13 HELIX 15 15 ASP A 360 THR A 371 1 12 HELIX 16 17 VAL A 389 LEU A 396 1 8 HELIX 17 18 LEU A 396 PHE A 418 1 23 HELIX 18 19 ASP A 421 SER A 429 1 9 HELIX 19 20 MET A 441 GLY A 448 1 8 HELIX 20 21 ALA A 456 THR A 466 1 11 HELIX 21 22 PHE A 468 GLU A 475 1 8 HELIX 22 23 ASN A 496 GLY A 508 1 13 HELIX 23 24 GLU A 509 VAL A 525 5 17 HELIX 24 25 ASP A 527 TYR A 553 1 27 HELIX 25 26 ARG A 575 GLU A 593 1 19 HELIX 26 27 TYR A 613 ASN A 631 1 19 HELIX 27 28 VAL A 636 ASP A 638 5 3 HELIX 28 29 ARG A 649 ILE A 657 1 9 HELIX 29 30 PRO A 658 ALA A 660 5 3 HELIX 30 31 THR A 676 ASN A 684 1 9 HELIX 31 32 ALA A 695 GLY A 704 1 10 HELIX 32 33 GLU A 705 PHE A 708 5 4 HELIX 33 34 ARG A 714 GLY A 725 1 12 HELIX 34 35 ALA A 728 ASP A 733 1 6 HELIX 35 36 ILE A 735 GLY A 748 1 14 HELIX 36 37 PHE A 758 HIS A 768 1 11 HELIX 37 38 LYS A 772 LYS A 792 1 21 HELIX 38 39 ASN A 793 ALA A 806 1 14 HELIX 39 40 THR A 807 PHE A 811 5 5 HELIX 40 41 SER A 812 ILE A 824 1 13 SHEET 1 A 3 LYS A 191 ALA A 192 0 SHEET 2 A 3 GLN A 219 PRO A 231 -1 O ASP A 227 N LYS A 191 SHEET 3 A 3 LEU A 198 PHE A 202 -1 N PHE A 202 O GLN A 219 SHEET 1 B 9 LYS A 191 ALA A 192 0 SHEET 2 B 9 GLN A 219 PRO A 231 -1 O ASP A 227 N LYS A 191 SHEET 3 B 9 VAL A 238 LYS A 247 -1 O SER A 245 N MET A 224 SHEET 4 B 9 ALA A 154 ILE A 159 1 N GLY A 156 O ARG A 242 SHEET 5 B 9 ARG A 81 LEU A 85 1 N TYR A 84 O TYR A 155 SHEET 6 B 9 VAL A 333 ASN A 338 1 O ALA A 334 N TYR A 83 SHEET 7 B 9 CYS A 372 THR A 375 1 O ALA A 373 N LEU A 337 SHEET 8 B 9 ALA A 451 GLY A 454 1 O ALA A 451 N TYR A 374 SHEET 9 B 9 PHE A 479 ASN A 481 1 O GLN A 480 N VAL A 452 SHEET 1 C 2 PHE A 89 TYR A 90 0 SHEET 2 C 2 GLY A 130 LEU A 131 -1 O LEU A 131 N PHE A 89 SHEET 1 D 2 ASN A 167 SER A 171 0 SHEET 2 D 2 TRP A 174 GLU A 178 -1 O MET A 176 N LYS A 169 SHEET 1 E 2 HIS A 205 THR A 209 0 SHEET 2 E 2 GLY A 212 VAL A 216 -1 O LYS A 214 N GLU A 207 SHEET 1 F 3 ARG A 386 PRO A 388 0 SHEET 2 F 3 ARG A 438 ASN A 440 -1 O ILE A 439 N TRP A 387 SHEET 3 F 3 VAL A 431 GLU A 432 -1 N GLU A 432 O ARG A 438 SHEET 1 G 6 LEU A 640 LEU A 645 0 SHEET 2 G 6 ARG A 601 GLY A 606 1 N ILE A 605 O ILE A 643 SHEET 3 G 6 LEU A 562 VAL A 567 1 N ASP A 564 O MET A 604 SHEET 4 G 6 LEU A 662 GLN A 665 1 O LEU A 662 N PHE A 563 SHEET 5 G 6 LEU A 687 GLY A 690 1 O LEU A 687 N SER A 663 SHEET 6 G 6 PHE A 709 ILE A 710 1 O PHE A 709 N THR A 688 LINK C ILE A 13 N SEP A 14 1555 1555 1.33 LINK C SEP A 14 N VAL A 15 1555 1555 1.33 LINK C MET A 679 N LLP A 680 1555 1555 1.33 LINK C LLP A 680 N PHE A 681 1555 1555 1.33 CRYST1 92.370 144.000 59.440 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010826 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006944 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016824 0.00000