PDB Short entry for 1ZEI HEADER HORMONE 14-JUL-98 1ZEI TITLE CROSS-LINKED B28 ASP INSULIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: INSULIN; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: B28ASP-X-MCR; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823; SOURCE 5 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 6 EXPRESSION_SYSTEM_COMMON: BAKER'S YEAST; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4932 KEYWDS HORMONE, METABOLIC ROLE, CHEMICAL ACTIVITY, INSULIN MUTANT, CROSS- KEYWDS 2 LINK, GLUCOSE METABOLISM, DIABETES EXPDTA X-RAY DIFFRACTION AUTHOR J.L.WHITTINGHAM,E.J.EDWARDS,A.A.ANTSON,J.M.CLARKSON,G.G.DODSON REVDAT 3 03-NOV-21 1ZEI 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 1ZEI 1 VERSN REVDAT 1 16-FEB-99 1ZEI 0 JRNL AUTH J.L.WHITTINGHAM,D.J.EDWARDS,A.A.ANTSON,J.M.CLARKSON, JRNL AUTH 2 G.G.DODSON JRNL TITL INTERACTIONS OF PHENOL AND M-CRESOL IN THE INSULIN HEXAMER, JRNL TITL 2 AND THEIR EFFECT ON THE ASSOCIATION PROPERTIES OF B28 PRO JRNL TITL 3 --> ASP INSULIN ANALOGUES. JRNL REF BIOCHEMISTRY V. 37 11516 1998 JRNL REFN ISSN 0006-2960 JRNL PMID 9708987 JRNL DOI 10.1021/BI980807S REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.CISZAK,J.M.BEALS,B.H.FRANK,J.C.BAKER,N.D.CARTER,G.D.SMITH REMARK 1 TITL ROLE OF C-TERMINAL B-CHAIN RESIDUES IN INSULIN ASSEMBLY: THE REMARK 1 TITL 2 STRUCTURE OF HEXAMERIC LYSB28PROB29-HUMAN INSULIN REMARK 1 REF STRUCTURE V. 3 615 1995 REMARK 1 REFN ISSN 0969-2126 REMARK 1 REFERENCE 2 REMARK 1 AUTH G.D.SMITH,G.G.DODSON REMARK 1 TITL THE STRUCTURE OF A RHOMBOHEDRAL R6 INSULIN HEXAMER THAT REMARK 1 TITL 2 BINDS PHENOL REMARK 1 REF BIOPOLYMERS V. 32 441 1992 REMARK 1 REFN ISSN 0006-3525 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.8 REMARK 3 NUMBER OF REFLECTIONS : 21942 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : 5.0 REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2502 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 68 REMARK 3 SOLVENT ATOMS : 228 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.019 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.041 ; 0.040 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.044 ; 0.050 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.028 ; 0.030 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.116 ; 0.100 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.171 ; 0.300 REMARK 3 MULTIPLE TORSION (A) : 0.272 ; 0.300 REMARK 3 H-BOND (X...Y) (A) : 0.169 ; 0.300 REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 4.900 ; 7.000 REMARK 3 STAGGERED (DEGREES) : 17.900; 15.000 REMARK 3 TRANSVERSE (DEGREES) : 16.500; 20.000 REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.393 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.460 ; 3.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.252 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.944 ; 3.000 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ZEI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000177469. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 4 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX9.5 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.88 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21942 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 19.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.8 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 49.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.21600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: THE MONOCLINIC PHENOL INSULIN DIMER REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.38600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -132.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 ASP A 28 REMARK 475 LYS A 29 REMARK 475 ALA A 30 REMARK 475 ALA A 31 REMARK 475 LYS A 32 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLY A 33 N REMARK 480 GLN A 37 CG CD OE1 NE2 REMARK 480 THR B 27 CB OG1 CG2 REMARK 480 ASP B 28 C O REMARK 480 LYS B 32 CD CE NZ REMARK 480 GLU C 13 CD OE1 OE2 REMARK 480 GLU C 21 CD OE1 OE2 REMARK 480 LYS C 32 CB CG CD CE NZ REMARK 480 GLU C 36 CB CG CD OE1 OE2 REMARK 480 GLU D 21 CB CG CD OE1 OE2 REMARK 480 ASP D 28 CG OD1 OD2 REMARK 480 LYS D 29 CG CD CE NZ REMARK 480 GLU D 36 CG CD OE1 OE2 REMARK 480 GLU E 21 CD OE1 OE2 REMARK 480 GLN E 37 CD OE1 NE2 REMARK 480 TYR F 46 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU C 13 O HOH C 61 1.94 REMARK 500 O HOH F 62 O HOH F 72 2.01 REMARK 500 OE1 GLN A 37 OH TYR A 51 2.06 REMARK 500 OE1 GLU B 21 O HOH B 77 2.12 REMARK 500 O HOH C 60 O HOH C 82 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS D 29 O ASN F 53 2455 1.63 REMARK 500 NZ LYS D 29 NH2 ARG F 22 2455 1.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 THR A 27 C ASP A 28 N -0.153 REMARK 500 HIS B 10 CE1 HIS B 10 NE2 0.116 REMARK 500 TYR B 16 CD1 TYR B 16 CE1 0.094 REMARK 500 GLY C 8 CA GLY C 8 C 0.102 REMARK 500 HIS C 10 CG HIS C 10 CD2 0.102 REMARK 500 SER D 9 CA SER D 9 CB 0.092 REMARK 500 HIS D 10 NE2 HIS D 10 CD2 -0.066 REMARK 500 CYS D 38 CB CYS D 38 SG 0.127 REMARK 500 CYS D 39 CB CYS D 39 SG 0.118 REMARK 500 CYS D 43 CA CYS D 43 CB -0.117 REMARK 500 CYS D 43 CB CYS D 43 SG -0.099 REMARK 500 LEU E 6 C LEU E 6 O 0.121 REMARK 500 SER E 9 CB SER E 9 OG -0.103 REMARK 500 CYS E 19 CB CYS E 19 SG 0.120 REMARK 500 GLY E 23 CA GLY E 23 C 0.157 REMARK 500 ASN E 53 C ASN E 53 OXT 0.141 REMARK 500 GLY F 8 N GLY F 8 CA 0.092 REMARK 500 TYR F 46 CB TYR F 46 CG 0.124 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS A 10 CB - CG - CD2 ANGL. DEV. = 9.0 DEGREES REMARK 500 HIS A 10 CG - ND1 - CE1 ANGL. DEV. = 7.4 DEGREES REMARK 500 LEU A 11 CB - CA - C ANGL. DEV. = -13.6 DEGREES REMARK 500 VAL A 12 CG1 - CB - CG2 ANGL. DEV. = -13.1 DEGREES REMARK 500 LEU A 17 CA - CB - CG ANGL. DEV. = 15.8 DEGREES REMARK 500 LEU A 17 CB - CG - CD2 ANGL. DEV. = 12.6 DEGREES REMARK 500 VAL A 18 CA - CB - CG2 ANGL. DEV. = -12.9 DEGREES REMARK 500 ARG A 22 NE - CZ - NH1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG A 22 NE - CZ - NH2 ANGL. DEV. = -8.9 DEGREES REMARK 500 PHE A 24 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 PHE A 24 CD1 - CE1 - CZ ANGL. DEV. = -7.2 DEGREES REMARK 500 PHE A 25 CA - CB - CG ANGL. DEV. = 15.8 DEGREES REMARK 500 ALA A 31 O - C - N ANGL. DEV. = -12.0 DEGREES REMARK 500 SER A 41 CB - CA - C ANGL. DEV. = -12.3 DEGREES REMARK 500 CYS A 52 N - CA - CB ANGL. DEV. = 9.7 DEGREES REMARK 500 PHE B 1 CE1 - CZ - CE2 ANGL. DEV. = 12.5 DEGREES REMARK 500 PHE B 1 CZ - CE2 - CD2 ANGL. DEV. = -9.2 DEGREES REMARK 500 VAL B 2 CA - CB - CG1 ANGL. DEV. = -9.8 DEGREES REMARK 500 GLU B 13 OE1 - CD - OE2 ANGL. DEV. = 7.9 DEGREES REMARK 500 TYR B 16 CD1 - CG - CD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 TYR B 16 CB - CG - CD1 ANGL. DEV. = -7.4 DEGREES REMARK 500 TYR B 16 CG - CD1 - CE1 ANGL. DEV. = -8.2 DEGREES REMARK 500 ARG B 22 CD - NE - CZ ANGL. DEV. = 13.0 DEGREES REMARK 500 ARG B 22 NH1 - CZ - NH2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ARG B 22 NE - CZ - NH1 ANGL. DEV. = -7.8 DEGREES REMARK 500 ARG B 22 NE - CZ - NH2 ANGL. DEV. = 14.4 DEGREES REMARK 500 ILE B 34 O - C - N ANGL. DEV. = -15.3 DEGREES REMARK 500 GLN B 37 CG - CD - OE1 ANGL. DEV. = 12.5 DEGREES REMARK 500 THR B 40 CA - CB - CG2 ANGL. DEV. = -9.7 DEGREES REMARK 500 ASN C 3 O - C - N ANGL. DEV. = -11.4 DEGREES REMARK 500 LEU C 6 CB - CG - CD1 ANGL. DEV. = 15.9 DEGREES REMARK 500 VAL C 12 CA - CB - CG2 ANGL. DEV. = 9.4 DEGREES REMARK 500 ASP C 28 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ALA C 31 O - C - N ANGL. DEV. = 12.2 DEGREES REMARK 500 GLU C 36 O - C - N ANGL. DEV. = -10.1 DEGREES REMARK 500 THR C 40 CA - CB - CG2 ANGL. DEV. = -9.3 DEGREES REMARK 500 CYS C 43 N - CA - CB ANGL. DEV. = -11.8 DEGREES REMARK 500 TYR C 51 O - C - N ANGL. DEV. = -10.9 DEGREES REMARK 500 HIS D 10 ND1 - CE1 - NE2 ANGL. DEV. = -10.5 DEGREES REMARK 500 HIS D 10 CE1 - NE2 - CD2 ANGL. DEV. = 11.0 DEGREES REMARK 500 GLU D 13 OE1 - CD - OE2 ANGL. DEV. = 8.1 DEGREES REMARK 500 VAL D 18 CG1 - CB - CG2 ANGL. DEV. = 9.8 DEGREES REMARK 500 PHE D 25 CB - CG - CD2 ANGL. DEV. = -4.8 DEGREES REMARK 500 PHE D 25 CB - CG - CD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 GLY D 33 C - N - CA ANGL. DEV. = -14.2 DEGREES REMARK 500 GLY D 33 N - CA - C ANGL. DEV. = -15.3 DEGREES REMARK 500 CYS D 38 CA - CB - SG ANGL. DEV. = -10.9 DEGREES REMARK 500 CYS D 38 O - C - N ANGL. DEV. = 14.2 DEGREES REMARK 500 CYS D 39 C - N - CA ANGL. DEV. = -18.5 DEGREES REMARK 500 THR D 40 OG1 - CB - CG2 ANGL. DEV. = -14.9 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 86 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 26 60.07 -116.66 REMARK 500 LYS A 29 -70.27 -64.36 REMARK 500 TYR C 26 47.94 -144.66 REMARK 500 LYS C 32 -36.67 -168.16 REMARK 500 ASP D 28 43.96 -76.84 REMARK 500 LYS D 29 -38.42 -142.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR C 16 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LEU A 11 -12.91 REMARK 500 VAL A 18 11.99 REMARK 500 VAL B 2 -10.92 REMARK 500 GLN B 4 15.34 REMARK 500 TYR B 26 14.15 REMARK 500 GLN B 37 10.94 REMARK 500 SER B 41 19.57 REMARK 500 SER C 44 -12.50 REMARK 500 TYR C 51 -10.47 REMARK 500 VAL D 18 10.47 REMARK 500 ARG D 22 13.18 REMARK 500 ALA E 14 -11.82 REMARK 500 LYS E 29 13.31 REMARK 500 ALA E 31 -11.08 REMARK 500 SER E 44 -12.08 REMARK 500 TYR E 46 -15.98 REMARK 500 GLY F 23 -10.27 REMARK 500 VAL F 35 -16.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 54 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 10 NE2 REMARK 620 2 HIS C 10 NE2 109.1 REMARK 620 3 CL C 55 CL 114.0 110.4 REMARK 620 4 HIS E 10 NE2 107.4 105.6 109.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 54 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 10 NE2 REMARK 620 2 CL B 55 CL 107.3 REMARK 620 3 HIS D 10 NE2 105.1 107.7 REMARK 620 4 HIS F 10 NE2 118.9 111.0 106.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 54 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 55 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 54 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 55 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CRS D 54 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CRS B 56 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CRS A 54 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CRS C 56 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CRS F 54 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CRS E 54 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CRS F 55 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CRS E 55 DBREF 1ZEI A 1 53 UNP P01315 INS_PIG 1 51 DBREF 1ZEI B 1 53 UNP P01315 INS_PIG 1 51 DBREF 1ZEI C 1 53 UNP P01315 INS_PIG 1 51 DBREF 1ZEI D 1 53 UNP P01315 INS_PIG 1 51 DBREF 1ZEI E 1 53 UNP P01315 INS_PIG 1 51 DBREF 1ZEI F 1 53 UNP P01315 INS_PIG 1 51 SEQADV 1ZEI ASP A 28 UNP P01315 PRO 28 ENGINEERED MUTATION SEQADV 1ZEI ALA A 31 UNP P01315 INSERTION SEQADV 1ZEI LYS A 32 UNP P01315 INSERTION SEQADV 1ZEI ASP B 28 UNP P01315 PRO 28 ENGINEERED MUTATION SEQADV 1ZEI ALA B 31 UNP P01315 INSERTION SEQADV 1ZEI LYS B 32 UNP P01315 INSERTION SEQADV 1ZEI ASP C 28 UNP P01315 PRO 28 ENGINEERED MUTATION SEQADV 1ZEI ALA C 31 UNP P01315 INSERTION SEQADV 1ZEI LYS C 32 UNP P01315 INSERTION SEQADV 1ZEI ASP D 28 UNP P01315 PRO 28 ENGINEERED MUTATION SEQADV 1ZEI ALA D 31 UNP P01315 INSERTION SEQADV 1ZEI LYS D 32 UNP P01315 INSERTION SEQADV 1ZEI ASP E 28 UNP P01315 PRO 28 ENGINEERED MUTATION SEQADV 1ZEI ALA E 31 UNP P01315 INSERTION SEQADV 1ZEI LYS E 32 UNP P01315 INSERTION SEQADV 1ZEI ASP F 28 UNP P01315 PRO 28 ENGINEERED MUTATION SEQADV 1ZEI ALA F 31 UNP P01315 INSERTION SEQADV 1ZEI LYS F 32 UNP P01315 INSERTION SEQRES 1 A 53 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 A 53 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 A 53 THR ASP LYS ALA ALA LYS GLY ILE VAL GLU GLN CYS CYS SEQRES 4 A 53 THR SER ILE CYS SER LEU TYR GLN LEU GLU ASN TYR CYS SEQRES 5 A 53 ASN SEQRES 1 B 53 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 B 53 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 B 53 THR ASP LYS ALA ALA LYS GLY ILE VAL GLU GLN CYS CYS SEQRES 4 B 53 THR SER ILE CYS SER LEU TYR GLN LEU GLU ASN TYR CYS SEQRES 5 B 53 ASN SEQRES 1 C 53 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 C 53 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 C 53 THR ASP LYS ALA ALA LYS GLY ILE VAL GLU GLN CYS CYS SEQRES 4 C 53 THR SER ILE CYS SER LEU TYR GLN LEU GLU ASN TYR CYS SEQRES 5 C 53 ASN SEQRES 1 D 53 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 D 53 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 D 53 THR ASP LYS ALA ALA LYS GLY ILE VAL GLU GLN CYS CYS SEQRES 4 D 53 THR SER ILE CYS SER LEU TYR GLN LEU GLU ASN TYR CYS SEQRES 5 D 53 ASN SEQRES 1 E 53 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 E 53 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 E 53 THR ASP LYS ALA ALA LYS GLY ILE VAL GLU GLN CYS CYS SEQRES 4 E 53 THR SER ILE CYS SER LEU TYR GLN LEU GLU ASN TYR CYS SEQRES 5 E 53 ASN SEQRES 1 F 53 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 F 53 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 F 53 THR ASP LYS ALA ALA LYS GLY ILE VAL GLU GLN CYS CYS SEQRES 4 F 53 THR SER ILE CYS SER LEU TYR GLN LEU GLU ASN TYR CYS SEQRES 5 F 53 ASN HET CRS A 54 8 HET ZN B 54 1 HET CL B 55 1 HET CRS B 56 8 HET ZN C 54 1 HET CL C 55 1 HET CRS C 56 8 HET CRS D 54 8 HET CRS E 54 8 HET CRS E 55 8 HET CRS F 54 8 HET CRS F 55 8 HETNAM CRS M-CRESOL HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION FORMUL 7 CRS 8(C7 H8 O) FORMUL 8 ZN 2(ZN 2+) FORMUL 9 CL 2(CL 1-) FORMUL 19 HOH *228(H2 O) HELIX 1 1 ASN A 3 ARG A 22 1 20 HELIX 2 2 ASP A 28 CYS A 38 1 11 HELIX 3 3 LEU A 45 TYR A 51 1 7 HELIX 4 4 ASN B 3 ARG B 22 1 20 HELIX 5 5 ALA B 31 CYS B 38 1 8 HELIX 6 6 LEU B 45 TYR B 51 1 7 HELIX 7 7 VAL C 2 ARG C 22 1 21 HELIX 8 8 GLY C 33 CYS C 38 1 6 HELIX 9 9 LEU C 45 TYR C 51 1 7 HELIX 10 10 VAL D 2 VAL D 18 1 17 HELIX 11 11 GLY D 20 ARG D 22 5 3 HELIX 12 12 ALA D 31 THR D 40 1 10 HELIX 13 13 LEU D 45 TYR D 51 1 7 HELIX 14 14 ASN E 3 ARG E 22 1 20 HELIX 15 15 ASP E 28 CYS E 38 1 11 HELIX 16 16 LEU E 45 TYR E 51 1 7 HELIX 17 17 GLN F 4 ARG F 22 1 19 HELIX 18 18 ASP F 28 CYS F 38 1 11 HELIX 19 19 LEU F 45 TYR F 51 1 7 SHEET 1 A 2 PHE A 24 THR A 27 0 SHEET 2 A 2 GLY B 23 TYR B 26 -1 O PHE B 24 N TYR A 26 SHEET 1 B 2 PHE C 25 THR C 27 0 SHEET 2 B 2 GLY D 23 PHE D 25 -1 O PHE D 24 N TYR C 26 SSBOND 1 CYS A 7 CYS A 39 1555 1555 1.93 SSBOND 2 CYS A 19 CYS A 52 1555 1555 2.05 SSBOND 3 CYS A 38 CYS A 43 1555 1555 2.02 SSBOND 4 CYS B 7 CYS B 39 1555 1555 2.00 SSBOND 5 CYS B 19 CYS B 52 1555 1555 2.11 SSBOND 6 CYS B 38 CYS B 43 1555 1555 1.96 SSBOND 7 CYS C 7 CYS C 39 1555 1555 2.05 SSBOND 8 CYS C 19 CYS C 52 1555 1555 1.98 SSBOND 9 CYS C 38 CYS C 43 1555 1555 2.04 SSBOND 10 CYS D 7 CYS D 39 1555 1555 2.02 SSBOND 11 CYS D 19 CYS D 52 1555 1555 2.12 SSBOND 12 CYS D 38 CYS D 43 1555 1555 1.95 SSBOND 13 CYS E 7 CYS E 39 1555 1555 2.02 SSBOND 14 CYS E 19 CYS E 52 1555 1555 2.04 SSBOND 15 CYS E 38 CYS E 43 1555 1555 2.00 SSBOND 16 CYS F 7 CYS F 39 1555 1555 2.07 SSBOND 17 CYS F 19 CYS F 52 1555 1555 2.03 SSBOND 18 CYS F 38 CYS F 43 1555 1555 1.97 LINK NE2 HIS A 10 ZN ZN C 54 1555 1555 2.08 LINK NE2 HIS B 10 ZN ZN B 54 1555 1555 2.01 LINK ZN ZN B 54 CL CL B 55 1555 1555 2.22 LINK ZN ZN B 54 NE2 HIS D 10 1555 1555 2.08 LINK ZN ZN B 54 NE2 HIS F 10 1555 1555 1.95 LINK NE2 HIS C 10 ZN ZN C 54 1555 1555 1.64 LINK ZN ZN C 54 CL CL C 55 1555 1555 2.23 LINK ZN ZN C 54 NE2 HIS E 10 1555 1555 2.00 SITE 1 AC1 4 HIS A 10 HIS C 10 CL C 55 HIS E 10 SITE 1 AC2 4 HIS A 10 HIS C 10 ZN C 54 HIS E 10 SITE 1 AC3 4 HIS B 10 CL B 55 HIS D 10 HIS F 10 SITE 1 AC4 4 HIS B 10 ZN B 54 HIS D 10 HIS F 10 SITE 1 AC5 6 HIS B 5 HIS D 10 LEU D 11 CYS D 38 SITE 2 AC5 6 ILE D 42 CYS D 43 SITE 1 AC6 7 HIS B 10 CYS B 38 SER B 41 ILE B 42 SITE 2 AC6 7 CYS B 43 HIS F 5 LEU F 6 SITE 1 AC7 6 CYS A 38 ILE A 42 CYS A 43 HOH A 72 SITE 2 AC7 6 HIS C 5 LEU D 17 SITE 1 AC8 5 LEU C 11 CYS C 38 SER C 41 ILE C 42 SITE 2 AC8 5 CYS C 43 SITE 1 AC9 5 ALA F 14 CYS F 38 SER F 41 ILE F 42 SITE 2 AC9 5 CYS F 43 SITE 1 BC1 7 HIS A 5 LEU B 17 LEU E 11 CYS E 38 SITE 2 BC1 7 SER E 41 ILE E 42 CYS E 43 SITE 1 BC2 5 TYR F 16 CYS F 19 GLY F 20 GLY F 23 SITE 2 BC2 5 PHE F 24 SITE 1 BC3 3 GLY E 23 PHE E 24 HOH E 63 CRYST1 53.952 64.772 48.914 90.00 109.81 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018535 0.000000 0.006677 0.00000 SCALE2 0.000000 0.015439 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021730 0.00000