PDB Short entry for 1ZGK HEADER PROTEIN BINDING 21-APR-05 1ZGK TITLE 1.35 ANGSTROM STRUCTURE OF THE KELCH DOMAIN OF KEAP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: KELCH-LIKE ECH-ASSOCIATED PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KELCH DOMAIN; COMPND 5 SYNONYM: CYTOSOLIC INHIBITOR OF NRF2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KEAP1, KIAA0132; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS BETA-PROPELLER, KELCH REPEAT MOTIF, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR X.LI,C.A.BOTTOMS,M.HANNINK,L.J.BEAMER REVDAT 2 24-FEB-09 1ZGK 1 VERSN REVDAT 1 04-OCT-05 1ZGK 0 JRNL AUTH L.J.BEAMER,X.LI,C.A.BOTTOMS,M.HANNINK JRNL TITL CONSERVED SOLVENT AND SIDE-CHAIN INTERACTIONS IN JRNL TITL 2 THE 1.35 ANGSTROM STRUCTURE OF THE KELCH DOMAIN OF JRNL TITL 3 KEAP1. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 61 1335 2005 JRNL REFN ISSN 0907-4449 JRNL PMID 16204884 JRNL DOI 10.1107/S0907444905022626 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH X.LI,D.ZHANG,M.HANNINK,L.J.BEAMER REMARK 1 TITL CRYSTAL STRUCTURE OF THE KELCH DOMAIN OF HUMAN REMARK 1 TITL 2 KEAP1 REMARK 1 REF J.BIOL.CHEM. V. 279 54750 2004 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 15475350 REMARK 1 DOI 10.1074/JBC.M410073200 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 61965 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.112 REMARK 3 R VALUE (WORKING SET) : 0.111 REMARK 3 FREE R VALUE : 0.133 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3318 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3442 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.1090 REMARK 3 BIN FREE R VALUE SET COUNT : 183 REMARK 3 BIN FREE R VALUE : 0.1530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2274 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 377 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.05000 REMARK 3 B12 (A**2) : -0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.040 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.038 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.019 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.008 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.980 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.974 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2339 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2091 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3212 ; 1.392 ; 1.937 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4823 ; 0.859 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 307 ; 7.230 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;28.938 ;22.222 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 346 ;10.619 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;18.868 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 358 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2695 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 519 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 351 ; 0.197 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2216 ; 0.204 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1169 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1412 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 229 ; 0.116 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.141 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 84 ; 0.328 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 39 ; 0.145 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1533 ; 1.363 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 611 ; 0.439 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2371 ; 1.933 ; 2.500 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 980 ; 3.146 ;10.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 832 ; 4.088 ;15.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4998 ; 1.205 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 377 ; 6.332 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4365 ; 2.404 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 322 A 609 REMARK 3 ORIGIN FOR THE GROUP (A): 1.9293 31.5486 68.5818 REMARK 3 T TENSOR REMARK 3 T11: -0.0208 T22: -0.0111 REMARK 3 T33: -0.0194 T12: 0.0049 REMARK 3 T13: -0.0034 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.5263 L22: 0.1984 REMARK 3 L33: 0.3044 L12: 0.0363 REMARK 3 L13: 0.1328 L23: 0.0178 REMARK 3 S TENSOR REMARK 3 S11: -0.0131 S12: 0.0351 S13: -0.0046 REMARK 3 S21: 0.0161 S22: -0.0069 S23: -0.0014 REMARK 3 S31: 0.0122 S32: 0.0368 S33: 0.0200 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 1ZGK COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-APR-05. REMARK 100 THE RCSB ID CODE IS RCSB032695. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : CCP4 (TRUNCATE) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71295 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 17.500 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 86.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4% PEG 4000, 100 MM NA HEPES, PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 98.54533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.27267 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 73.90900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 24.63633 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 123.18167 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 98.54533 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 49.27267 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 24.63633 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 73.90900 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 123.18167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 302 REMARK 465 SER A 303 REMARK 465 SER A 304 REMARK 465 HIS A 305 REMARK 465 HIS A 306 REMARK 465 HIS A 307 REMARK 465 HIS A 308 REMARK 465 HIS A 309 REMARK 465 HIS A 310 REMARK 465 SER A 311 REMARK 465 SER A 312 REMARK 465 GLY A 313 REMARK 465 LEU A 314 REMARK 465 VAL A 315 REMARK 465 PRO A 316 REMARK 465 ARG A 317 REMARK 465 GLY A 318 REMARK 465 SER A 319 REMARK 465 HIS A 320 REMARK 465 ALA A 321 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 323 CG CD CE NZ REMARK 470 GLN A 359 CG CD OE1 NE2 REMARK 470 GLU A 444 CG CD OE1 OE2 REMARK 470 GLU A 446 CG CD OE1 OE2 REMARK 470 HIS A 451 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 528 CG CD OE1 NE2 REMARK 470 ASP A 529 CG OD1 OD2 REMARK 470 LYS A 551 CG CD CE NZ REMARK 470 HIS A 575 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 593 CG CD OE1 OE2 REMARK 470 ARG A 596 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 336 -28.48 70.79 REMARK 500 VAL A 453 -166.51 -121.74 REMARK 500 ASN A 495 60.41 60.26 REMARK 500 HIS A 516 -126.94 54.80 REMARK 500 VAL A 547 -168.95 -116.48 REMARK 500 HIS A 575 -43.58 -140.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 655 DISTANCE = 7.22 ANGSTROMS REMARK 525 HOH A 956 DISTANCE = 5.10 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1U6D RELATED DB: PDB REMARK 900 1.85 A STRUCTURE OF THE KELCH DOMAIN OF HUMAN KEAP1 DBREF 1ZGK A 321 609 UNP Q14145 KEAP1_HUMAN 321 609 SEQADV 1ZGK GLY A 302 UNP Q14145 CLONING ARTIFACT SEQADV 1ZGK SER A 303 UNP Q14145 CLONING ARTIFACT SEQADV 1ZGK SER A 304 UNP Q14145 CLONING ARTIFACT SEQADV 1ZGK HIS A 305 UNP Q14145 EXPRESSION TAG SEQADV 1ZGK HIS A 306 UNP Q14145 EXPRESSION TAG SEQADV 1ZGK HIS A 307 UNP Q14145 EXPRESSION TAG SEQADV 1ZGK HIS A 308 UNP Q14145 EXPRESSION TAG SEQADV 1ZGK HIS A 309 UNP Q14145 EXPRESSION TAG SEQADV 1ZGK HIS A 310 UNP Q14145 EXPRESSION TAG SEQADV 1ZGK SER A 311 UNP Q14145 CLONING ARTIFACT SEQADV 1ZGK SER A 312 UNP Q14145 CLONING ARTIFACT SEQADV 1ZGK GLY A 313 UNP Q14145 CLONING ARTIFACT SEQADV 1ZGK LEU A 314 UNP Q14145 CLONING ARTIFACT SEQADV 1ZGK VAL A 315 UNP Q14145 CLONING ARTIFACT SEQADV 1ZGK PRO A 316 UNP Q14145 CLONING ARTIFACT SEQADV 1ZGK ARG A 317 UNP Q14145 CLONING ARTIFACT SEQADV 1ZGK GLY A 318 UNP Q14145 CLONING ARTIFACT SEQADV 1ZGK SER A 319 UNP Q14145 CLONING ARTIFACT SEQADV 1ZGK HIS A 320 UNP Q14145 CLONING ARTIFACT SEQADV 1ZGK MSE A 399 UNP Q14145 MET 399 MODIFIED RESIDUE SEQADV 1ZGK MSE A 409 UNP Q14145 MET 409 MODIFIED RESIDUE SEQADV 1ZGK MSE A 456 UNP Q14145 MET 456 MODIFIED RESIDUE SEQADV 1ZGK MSE A 499 UNP Q14145 MET 499 MODIFIED RESIDUE SEQADV 1ZGK MSE A 503 UNP Q14145 MET 503 MODIFIED RESIDUE SEQADV 1ZGK MSE A 550 UNP Q14145 MET 550 MODIFIED RESIDUE SEQADV 1ZGK MSE A 597 UNP Q14145 MET 597 MODIFIED RESIDUE SEQRES 1 A 308 GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU SEQRES 2 A 308 VAL PRO ARG GLY SER HIS ALA PRO LYS VAL GLY ARG LEU SEQRES 3 A 308 ILE TYR THR ALA GLY GLY TYR PHE ARG GLN SER LEU SER SEQRES 4 A 308 TYR LEU GLU ALA TYR ASN PRO SER ASN GLY THR TRP LEU SEQRES 5 A 308 ARG LEU ALA ASP LEU GLN VAL PRO ARG SER GLY LEU ALA SEQRES 6 A 308 GLY CYS VAL VAL GLY GLY LEU LEU TYR ALA VAL GLY GLY SEQRES 7 A 308 ARG ASN ASN SER PRO ASP GLY ASN THR ASP SER SER ALA SEQRES 8 A 308 LEU ASP CYS TYR ASN PRO MSE THR ASN GLN TRP SER PRO SEQRES 9 A 308 CYS ALA PRO MSE SER VAL PRO ARG ASN ARG ILE GLY VAL SEQRES 10 A 308 GLY VAL ILE ASP GLY HIS ILE TYR ALA VAL GLY GLY SER SEQRES 11 A 308 HIS GLY CYS ILE HIS HIS ASN SER VAL GLU ARG TYR GLU SEQRES 12 A 308 PRO GLU ARG ASP GLU TRP HIS LEU VAL ALA PRO MSE LEU SEQRES 13 A 308 THR ARG ARG ILE GLY VAL GLY VAL ALA VAL LEU ASN ARG SEQRES 14 A 308 LEU LEU TYR ALA VAL GLY GLY PHE ASP GLY THR ASN ARG SEQRES 15 A 308 LEU ASN SER ALA GLU CYS TYR TYR PRO GLU ARG ASN GLU SEQRES 16 A 308 TRP ARG MSE ILE THR ALA MSE ASN THR ILE ARG SER GLY SEQRES 17 A 308 ALA GLY VAL CYS VAL LEU HIS ASN CYS ILE TYR ALA ALA SEQRES 18 A 308 GLY GLY TYR ASP GLY GLN ASP GLN LEU ASN SER VAL GLU SEQRES 19 A 308 ARG TYR ASP VAL GLU THR GLU THR TRP THR PHE VAL ALA SEQRES 20 A 308 PRO MSE LYS HIS ARG ARG SER ALA LEU GLY ILE THR VAL SEQRES 21 A 308 HIS GLN GLY ARG ILE TYR VAL LEU GLY GLY TYR ASP GLY SEQRES 22 A 308 HIS THR PHE LEU ASP SER VAL GLU CYS TYR ASP PRO ASP SEQRES 23 A 308 THR ASP THR TRP SER GLU VAL THR ARG MSE THR SER GLY SEQRES 24 A 308 ARG SER GLY VAL GLY VAL ALA VAL THR MODRES 1ZGK MSE A 399 MET SELENOMETHIONINE MODRES 1ZGK MSE A 409 MET SELENOMETHIONINE MODRES 1ZGK MSE A 456 MET SELENOMETHIONINE MODRES 1ZGK MSE A 499 MET SELENOMETHIONINE MODRES 1ZGK MSE A 503 MET SELENOMETHIONINE MODRES 1ZGK MSE A 550 MET SELENOMETHIONINE MODRES 1ZGK MSE A 597 MET SELENOMETHIONINE HET MSE A 399 8 HET MSE A 409 8 HET MSE A 456 8 HET MSE A 499 11 HET MSE A 503 8 HET MSE A 550 8 HET MSE A 597 13 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 HOH *377(H2 O) SHEET 1 A 4 TRP A 352 ARG A 354 0 SHEET 2 A 4 LEU A 342 TYR A 345 -1 N ALA A 344 O LEU A 353 SHEET 3 A 4 LEU A 327 ALA A 331 -1 N ILE A 328 O TYR A 345 SHEET 4 A 4 GLY A 605 THR A 609 -1 O ALA A 607 N TYR A 329 SHEET 1 B 4 ALA A 366 VAL A 370 0 SHEET 2 B 4 LEU A 373 VAL A 377 -1 O TYR A 375 N CYS A 368 SHEET 3 B 4 LEU A 393 TYR A 396 -1 O TYR A 396 N LEU A 374 SHEET 4 B 4 TRP A 403 PRO A 405 -1 O SER A 404 N CYS A 395 SHEET 1 C 2 ARG A 380 SER A 383 0 SHEET 2 C 2 GLY A 386 ASP A 389 -1 O THR A 388 N ASN A 381 SHEET 1 D 4 GLY A 417 ILE A 421 0 SHEET 2 D 4 HIS A 424 VAL A 428 -1 O TYR A 426 N GLY A 419 SHEET 3 D 4 VAL A 440 GLU A 444 -1 O TYR A 443 N ILE A 425 SHEET 4 D 4 GLU A 449 LEU A 452 -1 O HIS A 451 N ARG A 442 SHEET 1 E 2 SER A 431 HIS A 432 0 SHEET 2 E 2 ILE A 435 HIS A 436 -1 O ILE A 435 N HIS A 432 SHEET 1 F 4 GLY A 464 LEU A 468 0 SHEET 2 F 4 LEU A 471 VAL A 475 -1 O TYR A 473 N ALA A 466 SHEET 3 F 4 ALA A 487 TYR A 491 -1 O TYR A 490 N LEU A 472 SHEET 4 F 4 GLU A 496 MSE A 499 -1 O GLU A 496 N TYR A 491 SHEET 1 G 4 GLY A 511 LEU A 515 0 SHEET 2 G 4 CYS A 518 ALA A 522 -1 O ALA A 522 N GLY A 511 SHEET 3 G 4 VAL A 534 ASP A 538 -1 O GLU A 535 N ALA A 521 SHEET 4 G 4 THR A 543 VAL A 547 -1 O VAL A 547 N VAL A 534 SHEET 1 H 4 GLY A 558 HIS A 562 0 SHEET 2 H 4 ARG A 565 LEU A 569 -1 O TYR A 567 N THR A 560 SHEET 3 H 4 SER A 580 ASP A 585 -1 O TYR A 584 N ILE A 566 SHEET 4 H 4 THR A 590 ARG A 596 -1 O SER A 592 N CYS A 583 LINK C PRO A 398 N MSE A 399 1555 1555 1.33 LINK C MSE A 399 N THR A 400 1555 1555 1.32 LINK C PRO A 408 N MSE A 409 1555 1555 1.32 LINK C MSE A 409 N SER A 410 1555 1555 1.33 LINK C PRO A 455 N MSE A 456 1555 1555 1.32 LINK C MSE A 456 N LEU A 457 1555 1555 1.32 LINK C ARG A 498 N MSE A 499 1555 1555 1.33 LINK C MSE A 499 N ILE A 500 1555 1555 1.33 LINK C ALA A 502 N MSE A 503 1555 1555 1.33 LINK C MSE A 503 N ASN A 504 1555 1555 1.32 LINK C PRO A 549 N MSE A 550 1555 1555 1.33 LINK C MSE A 550 N LYS A 551 1555 1555 1.33 LINK C ARG A 596 N MSE A 597 1555 1555 1.32 LINK C MSE A 597 N THR A 598 1555 1555 1.33 CRYST1 85.745 85.745 147.818 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011662 0.006733 0.000000 0.00000 SCALE2 0.000000 0.013467 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006765 0.00000