PDB Short entry for 1ZRP HEADER ELECTRON TRANSPORT 10-JUL-92 1ZRP TITLE SOLUTION-STATE STRUCTURE BY NMR OF ZINC-SUBSTITUTED RUBREDOXIN FROM TITLE 2 THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RUBREDOXIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 2261 KEYWDS ELECTRON TRANSPORT EXPDTA SOLUTION NMR NUMMDL 40 AUTHOR P.R.BLAKE,J.B.PARK,Z.H.ZHOU,D.R.HARE,M.W.W.ADAMS,M.F.SUMMERS REVDAT 4 29-NOV-17 1ZRP 1 REMARK HELIX REVDAT 3 24-FEB-09 1ZRP 1 VERSN REVDAT 2 01-APR-03 1ZRP 1 JRNL REVDAT 1 31-OCT-93 1ZRP 0 JRNL AUTH P.R.BLAKE,J.B.PARK,Z.H.ZHOU,D.R.HARE,M.W.ADAMS,M.F.SUMMERS JRNL TITL SOLUTION-STATE STRUCTURE BY NMR OF ZINC-SUBSTITUTED JRNL TITL 2 RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM JRNL TITL 3 PYROCOCCUS FURIOSUS. JRNL REF PROTEIN SCI. V. 1 1508 1992 JRNL REFN ISSN 0961-8368 JRNL PMID 1303769 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.R.BLAKE,M.W.DAY,B.T.HSU,L.JOSHUA-TOR,J.-B.PARK,D.R.HARE, REMARK 1 AUTH 2 M.W.W.ADAMS,D.C.REES,M.F.SUMMERS REMARK 1 TITL COMPARISON OF THE X-RAY STRUCTURE OF NATIVE RUBREDOXIN FROM REMARK 1 TITL 2 PYROCOCCUS FURIOSUS WITH THE NMR STRUCTURE OF THE REMARK 1 TITL 3 ZINC-SUBSTITUTED PROTEIN REMARK 1 REF PROTEIN SCI. V. 1 1522 1992 REMARK 1 REFN ISSN 0961-8368 REMARK 1 REFERENCE 2 REMARK 1 AUTH P.R.BLAKE,B.LEE,M.F.SUMMERS,M.W.ADAMS,J.B.PARK,Z.H.ZHOU, REMARK 1 AUTH 2 A.BAX REMARK 1 TITL QUANTITATIVE MEASUREMENT OF SMALL THROUGH-HYDROGEN-BOND AND REMARK 1 TITL 2 'THROUGH-SPACE' 1H-113CD AND 1H-199HG J COUPLINGS IN REMARK 1 TITL 3 METAL-SUBSTITUTED RUBREDOXIN FROM PYROCOCCUS FURIOSUS REMARK 1 REF J.BIOMOL.NMR V. 2 527 1992 REMARK 1 REFN ISSN 0925-2738 REMARK 1 REFERENCE 3 REMARK 1 AUTH P.R.BLAKE,J.B.PARK,M.W.W.ADAMS,M.F.SUMMERS REMARK 1 TITL NOVEL OBSERVATION OF NH...S(CYS) HYDROGEN-BOND-MEDIATED REMARK 1 TITL 2 SCALAR COUPLING IN 113CD-SUBSTITUTED RUBREDOXIN FROM REMARK 1 TITL 3 PYROCOCCUS FURIOSUS REMARK 1 REF J.AM.CHEM.SOC. V. 114 4931 1992 REMARK 1 REFN ISSN 0002-7863 REMARK 1 REFERENCE 4 REMARK 1 AUTH P.R.BLAKE,J.-B.PARK,F.O.BRYANT,S.AONO,J.K.MAGNUSON, REMARK 1 AUTH 2 E.ECCLESTON,J.B.HOWARD,M.F.SUMMERS,M.W.W.ADAMS REMARK 1 TITL DETERMINANTS OF PROTEIN HYPERTHERMOSTABILITY: PURIFICATION REMARK 1 TITL 2 AND AMINO ACID SEQUENCE OF RUBREDOXIN FROM THE REMARK 1 TITL 3 HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS AND REMARK 1 TITL 4 SECONDARY STRUCTURE OF THE ZINC ADDUCT BY NMR REMARK 1 REF BIOCHEMISTRY V. 30 10885 1991 REMARK 1 REFN ISSN 0006-2960 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DSPACE REMARK 3 AUTHORS : HARE RESEARCH INC. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ZRP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000177531. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 40 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 54 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 38 SG REMARK 620 2 CYS A 41 SG 106.6 REMARK 620 3 CYS A 5 SG 106.4 106.9 REMARK 620 4 CYS A 8 SG 106.8 122.4 106.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 54 DBREF 1ZRP A 1 53 UNP P24297 RUBR_PYRFU 1 53 SEQRES 1 A 53 ALA LYS TRP VAL CYS LYS ILE CYS GLY TYR ILE TYR ASP SEQRES 2 A 53 GLU ASP ALA GLY ASP PRO ASP ASN GLY ILE SER PRO GLY SEQRES 3 A 53 THR LYS PHE GLU GLU LEU PRO ASP ASP TRP VAL CYS PRO SEQRES 4 A 53 ILE CYS GLY ALA PRO LYS SER GLU PHE GLU LYS LEU GLU SEQRES 5 A 53 ASP HET ZN A 54 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 HC1 ASP A 13 GLY A 17 5 5 HELIX 2 HC2 ASP A 18 GLY A 22 5 5 HELIX 3 HC3 LYS A 28 LEU A 32 5 5 HELIX 4 HC4 PRO A 44 PHE A 48 5 5 SHEET 1 BSA 3 TYR A 10 GLU A 14 0 SHEET 2 BSA 3 ALA A 1 CYS A 5 -1 SHEET 3 BSA 3 PHE A 48 LEU A 51 -1 SHEET 1 BSB 2 GLY A 17 PRO A 19 0 SHEET 2 BSB 2 ILE A 23 SER A 24 -1 SHEET 1 BSC 2 TRP A 36 CYS A 38 0 SHEET 2 BSC 2 PRO A 44 LYS A 45 -1 LINK ZN ZN A 54 SG CYS A 38 1555 1555 2.31 LINK ZN ZN A 54 SG CYS A 41 1555 1555 2.30 LINK ZN ZN A 54 SG CYS A 5 1555 1555 2.31 LINK ZN ZN A 54 SG CYS A 8 1555 1555 2.30 SITE 1 AC1 4 CYS A 5 CYS A 8 CYS A 38 CYS A 41 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000