PDB Short entry for 2AJQ HEADER TRANSFERASE,TRANSCRIPTION/DNA 02-AUG-05 2AJQ TITLE STRUCTURE OF REPLICATIVE DNA POLYMERASE PROVIDES INSIGTS INTO THE TITLE 2 MECHANISMS FOR PROCESSIVITY, FRAMESHIFTING AND EDITING COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA PRIMER; COMPND 3 CHAIN: P, X; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA TEMPLATE; COMPND 7 CHAIN: T, Z; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: T7 DNA POLYMERASE; COMPND 11 CHAIN: A, F; COMPND 12 EC: 2.7.7.7; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: THIOREDOXIN 1; COMPND 17 CHAIN: B, I; COMPND 18 SYNONYM: TRX1; TRX; COMPND 19 ENGINEERED: YES; COMPND 20 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T7; SOURCE 7 ORGANISM_TAXID: 10760; SOURCE 8 GENE: 5; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 11 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) PLYS S; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PET-LIKE; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PGP5; SOURCE 14 OTHER_DETAILS: PROTEIN INDUCED AT AN OD_600 OF 0.5 BY ADDITION OF SOURCE 15 0.5 MM IPTG FOR 4 HOURS AT 37C; SOURCE 16 MOL_ID: 4; SOURCE 17 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 18 ORGANISM_TAXID: 562; SOURCE 19 GENE: TRXA, FIPA, TSNC; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) PLYS S; SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: PET-LIKE; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: P-TRX; SOURCE 25 OTHER_DETAILS: PROTEIN INDUCED AT AN OD_600 OF 0.5 BY ADDITION OF SOURCE 26 0.5 MM IPTG FOR 4 HOURS AT 37C KEYWDS POLYMERASE T7; X-RAY CRYSTALLOGRAPHY; TERNARY COMPLEX, TRANSFERASE, KEYWDS 2 TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.BRIEBA,T.ELLENBERGER REVDAT 5 14-FEB-24 2AJQ 1 REMARK REVDAT 4 20-OCT-21 2AJQ 1 SEQADV LINK REVDAT 3 17-NOV-09 2AJQ 1 REMARK TITLE REVDAT 2 24-FEB-09 2AJQ 1 VERSN REVDAT 1 26-SEP-06 2AJQ 0 JRNL AUTH L.BRIEBA,T.ELLENBERGER JRNL TITL STRUCTURE OF REPLICATIVE DNA POLYMERASE PROVIDES INSIGTS JRNL TITL 2 INTO THE MECHANISMS FOR PROCESSIVITY, FRAMESHIFTING AND JRNL TITL 3 EDITING JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 4557696.910 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 78685 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3929 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 12355 REMARK 3 BIN R VALUE (WORKING SET) : 0.3050 REMARK 3 BIN FREE R VALUE : 0.3880 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 621 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.016 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12588 REMARK 3 NUCLEIC ACID ATOMS : 1789 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 414 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.72000 REMARK 3 B22 (A**2) : -8.54000 REMARK 3 B33 (A**2) : 16.26000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM SIGMAA (A) : 0.34 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.48 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.980 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.32 REMARK 3 BSOL : 46.06 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA-TT.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2AJQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-05. REMARK 100 THE DEPOSITION ID IS D_1000033975. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X26C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.100 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : TRUNCATE, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : CCP4 (TRUNCATE) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76808 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 45.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : 0.11100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.33300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: A COMPLEX OF 1X10^-4 M T7 DNA REMARK 280 POLYMERASE 5A7A:THIOREDOXIN WAS ASSEMBLED WITH AN EQUIMOLAR REMARK 280 AMOUNT OF DOUBLE STRANDED DNA SUBSTRATE. CRYSTALLIZATION WAS REMARK 280 ACHIEVED USING A BUFFER CONTAINING 50MM HEPES PH 7.5, 10MM MGCL_ REMARK 280 2, 2MM DTT, AND 0.5 MM TERMINAL DDTTP SEED CRYSTALS WERE GROWN REMARK 280 BY HANGING DROP VAPOR DIFFUSION BY MIXING 1UL EACH OF PROTEIN- REMARK 280 DNA SOLUTION AND A RESERVOIR SOLUTIONS CONTAINING BETWEEN 16 TO REMARK 280 20% PEG 8000, 100MM ACES PH 7.5, 120 AMMONIUM SULFATE, 30MM REMARK 280 MGCL2, AND 5MM DTT. THESE CRYSTALS WERE USED TO STREAK-SEED A REMARK 280 GRID OF PROTEIN/RESERVOIR SOLUTIONS WITH CONCENTRATIONS OF PEG REMARK 280 8000 BETWEEN 13 TO 15%. PYRAMIDAL CRYSTALS APPEARED OVERNIGHT REMARK 280 AND REACHED A MAXIMUM SIZE OF ~150 X 150 X 100 UM3 AFTER 3 TO 4 REMARK 280 DAYS. CRYSTALS WERE HARVESTED OVERNIGHT IN MOTHER-LIQUOR REMARK 280 CONTAINING 10 % PEG 400, TEMPERATURE 273K, VAPOR DIFFUSION, REMARK 280 HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.89400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 89.89400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 84.15600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 84.61750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 84.15600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 84.61750 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 89.89400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 84.15600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 84.61750 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 89.89400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 84.15600 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 84.61750 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: P, T, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: X, Z, F, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DC P 801 REMARK 465 DG P 802 REMARK 465 DA T 851 REMARK 465 DT T 874 REMARK 465 DC T 875 REMARK 465 DG T 876 REMARK 465 DC X 901 REMARK 465 DA Z 951 REMARK 465 SER B 1 REMARK 465 ASP B 2 REMARK 465 ALA B 108 REMARK 465 LYS F 300 REMARK 465 PRO F 301 REMARK 465 LYS F 302 REMARK 465 ASN F 303 REMARK 465 LYS F 304 REMARK 465 ALA F 305 REMARK 465 GLN F 306 REMARK 465 ARG F 307 REMARK 465 GLU F 308 REMARK 465 GLY F 309 REMARK 465 ARG F 310 REMARK 465 GLU F 311 REMARK 465 PRO F 312 REMARK 465 CYS F 313 REMARK 465 GLU F 314 REMARK 465 SER I 1 REMARK 465 ASP I 2 REMARK 465 ALA I 108 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DA P 803 P OP1 OP2 O5' C5' C4' O4' REMARK 470 DA P 803 C3' C2' C1' N9 C8 N7 C5 REMARK 470 DA P 803 C6 N6 N1 C2 N3 C4 REMARK 470 LEU A 115 CG CD1 CD2 REMARK 470 GLU A 126 CG CD OE1 OE2 REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 LEU A 147 CG CD1 CD2 REMARK 470 GLU A 149 CG CD OE1 OE2 REMARK 470 GLU A 152 CG CD OE1 OE2 REMARK 470 GLU A 153 CG CD OE1 OE2 REMARK 470 VAL A 155 CG1 CG2 REMARK 470 ASP A 156 CG OD1 OD2 REMARK 470 LYS A 300 CG CD CE NZ REMARK 470 LYS A 302 CG CD CE NZ REMARK 470 LYS A 304 CG CD CE NZ REMARK 470 GLN A 306 CG CD OE1 NE2 REMARK 470 ARG A 307 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 308 CG CD OE1 OE2 REMARK 470 ARG A 310 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 311 CG CD OE1 OE2 REMARK 470 LYS A 536 CD CE NZ REMARK 470 GLU A 583 CG CD OE1 OE2 REMARK 470 ASP B 20 CG OD1 OD2 REMARK 470 LEU F 115 CG CD1 CD2 REMARK 470 GLU F 126 CG CD OE1 OE2 REMARK 470 LYS F 144 CG CD CE NZ REMARK 470 GLU F 149 CG CD OE1 OE2 REMARK 470 GLU F 153 CG CD OE1 OE2 REMARK 470 VAL F 155 CG1 CG2 REMARK 470 ASP F 156 CG OD1 OD2 REMARK 470 HIS F 498 ND1 CD2 CE1 NE2 REMARK 470 LYS F 508 CE NZ REMARK 470 GLU F 583 CG CD OE1 OE2 REMARK 470 ASP I 20 CG OD1 OD2 REMARK 470 LYS I 82 CG CD CE NZ REMARK 470 ASN I 83 CG OD1 ND2 REMARK 470 ASN I 106 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH F 5072 O HOH F 5072 3555 1.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA P 803 O3' DA P 804 P -0.086 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC P 820 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DA T 855 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT T 856 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG T 863 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 10 -176.05 -174.01 REMARK 500 HIS A 19 -78.47 -87.81 REMARK 500 PRO A 36 -54.44 -29.58 REMARK 500 ASN A 60 34.24 71.34 REMARK 500 TYR A 64 -77.86 -115.34 REMARK 500 HIS A 99 66.47 -113.89 REMARK 500 GLU A 149 32.56 -77.79 REMARK 500 GLN A 150 -14.89 -151.87 REMARK 500 GLU A 152 155.68 -39.95 REMARK 500 GLU A 153 -151.67 -82.02 REMARK 500 ASP A 156 106.92 -29.85 REMARK 500 GLU A 195 -7.26 -56.16 REMARK 500 ASP A 200 55.22 -142.40 REMARK 500 LYS A 302 7.79 -179.32 REMARK 500 ARG A 307 32.35 -82.97 REMARK 500 GLU A 308 -43.85 179.54 REMARK 500 ARG A 310 -115.93 -173.82 REMARK 500 CYS A 313 -101.89 -72.97 REMARK 500 ALA A 400 -46.69 -135.17 REMARK 500 ILE A 464 -65.03 -99.51 REMARK 500 ALA A 543 -159.98 -151.73 REMARK 500 HIS A 653 -102.31 61.64 REMARK 500 ASP B 10 -75.96 -87.91 REMARK 500 ASP B 15 -33.42 -172.10 REMARK 500 LYS B 18 -88.63 -57.97 REMARK 500 ALA B 19 120.27 -1.47 REMARK 500 TYR B 49 24.62 -76.86 REMARK 500 LEU B 53 145.55 179.55 REMARK 500 ASN B 83 -59.58 68.89 REMARK 500 HIS F 19 -77.49 -82.03 REMARK 500 ALA F 29 19.42 86.03 REMARK 500 PRO F 36 -45.48 -29.49 REMARK 500 TYR F 64 -78.01 -116.70 REMARK 500 HIS F 99 68.96 -107.52 REMARK 500 LYS F 103 -9.39 -56.74 REMARK 500 LYS F 114 11.69 175.16 REMARK 500 PRO F 116 33.19 -41.73 REMARK 500 GLU F 149 25.87 -75.24 REMARK 500 GLN F 150 -19.21 -158.55 REMARK 500 TYR F 154 103.01 53.82 REMARK 500 ASP F 156 108.61 -45.92 REMARK 500 ASP F 200 53.67 -141.07 REMARK 500 LYS F 268 117.47 -163.91 REMARK 500 THR F 279 -166.11 -74.57 REMARK 500 ASP F 316 134.51 -172.77 REMARK 500 ALA F 324 108.91 -59.27 REMARK 500 ALA F 400 -44.32 -137.23 REMARK 500 LEU F 437 5.41 -69.18 REMARK 500 ASP F 492 12.22 -141.79 REMARK 500 ASN F 493 75.65 38.40 REMARK 500 REMARK 500 THIS ENTRY HAS 76 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DC P 820 0.10 SIDE CHAIN REMARK 500 DA P 821 0.07 SIDE CHAIN REMARK 500 DG T 854 0.05 SIDE CHAIN REMARK 500 DA T 855 0.07 SIDE CHAIN REMARK 500 DT T 856 0.07 SIDE CHAIN REMARK 500 DG T 857 0.10 SIDE CHAIN REMARK 500 DC X 920 0.08 SIDE CHAIN REMARK 500 DA X 921 0.06 SIDE CHAIN REMARK 500 DA Z 955 0.06 SIDE CHAIN REMARK 500 DG Z 957 0.05 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1T7P RELATED DB: PDB DBREF 2AJQ A 1 704 UNP P00581 DPOL_BPT7 1 704 DBREF 2AJQ B 1 108 UNP P0AA25 THIO_ECOLI 1 108 DBREF 2AJQ F 1 704 UNP P00581 DPOL_BPT7 1 704 DBREF 2AJQ I 1 108 UNP P0AA25 THIO_ECOLI 1 108 DBREF 2AJQ P 801 822 PDB 2AJQ 2AJQ 801 822 DBREF 2AJQ T 851 876 PDB 2AJQ 2AJQ 851 876 DBREF 2AJQ X 901 922 PDB 2AJQ 2AJQ 901 922 DBREF 2AJQ Z 951 976 PDB 2AJQ 2AJQ 951 976 SEQADV 2AJQ ALA A 5 UNP P00581 ASP 5 ENGINEERED MUTATION SEQADV 2AJQ ALA A 7 UNP P00581 GLU 7 ENGINEERED MUTATION SEQADV 2AJQ ALA F 5 UNP P00581 ASP 5 ENGINEERED MUTATION SEQADV 2AJQ ALA F 7 UNP P00581 GLU 7 ENGINEERED MUTATION SEQRES 1 P 22 DC DG DA DA DA DA DC DG DA DC DG DG DC SEQRES 2 P 22 DC DA DG DT DG DC DC DA 2DT SEQRES 1 T 26 DA DT DG DG DA DT DG DG DC DA DC DT DG SEQRES 2 T 26 DG DC DC DG DT DC DG DT DT DT DT DC DG SEQRES 1 X 22 DC DG DA DA DA DA DC DG DA DC DG DG DC SEQRES 2 X 22 DC DA DG DT DG DC DC DA 2DT SEQRES 1 Z 26 DA DT DG DG DA DT DG DG DC DA DC DT DG SEQRES 2 Z 26 DG DC DC DG DT DC DG DT DT DT DT DC DG SEQRES 1 A 704 MET ILE VAL SER ALA ILE ALA ALA ASN ALA LEU LEU GLU SEQRES 2 A 704 SER VAL THR LYS PHE HIS CYS GLY VAL ILE TYR ASP TYR SEQRES 3 A 704 SER THR ALA GLU TYR VAL SER TYR ARG PRO SER ASP PHE SEQRES 4 A 704 GLY ALA TYR LEU ASP ALA LEU GLU ALA GLU VAL ALA ARG SEQRES 5 A 704 GLY GLY LEU ILE VAL PHE HIS ASN GLY HIS LYS TYR ASP SEQRES 6 A 704 VAL PRO ALA LEU THR LYS LEU ALA LYS LEU GLN LEU ASN SEQRES 7 A 704 ARG GLU PHE HIS LEU PRO ARG GLU ASN CYS ILE ASP THR SEQRES 8 A 704 LEU VAL LEU SER ARG LEU ILE HIS SER ASN LEU LYS ASP SEQRES 9 A 704 THR ASP MET GLY LEU LEU ARG SER GLY LYS LEU PRO GLY SEQRES 10 A 704 LYS ARG PHE GLY SER HIS ALA LEU GLU ALA TRP GLY TYR SEQRES 11 A 704 ARG LEU GLY GLU MET LYS GLY GLU TYR LYS ASP ASP PHE SEQRES 12 A 704 LYS ARG MET LEU GLU GLU GLN GLY GLU GLU TYR VAL ASP SEQRES 13 A 704 GLY MET GLU TRP TRP ASN PHE ASN GLU GLU MET MET ASP SEQRES 14 A 704 TYR ASN VAL GLN ASP VAL VAL VAL THR LYS ALA LEU LEU SEQRES 15 A 704 GLU LYS LEU LEU SER ASP LYS HIS TYR PHE PRO PRO GLU SEQRES 16 A 704 ILE ASP PHE THR ASP VAL GLY TYR THR THR PHE TRP SER SEQRES 17 A 704 GLU SER LEU GLU ALA VAL ASP ILE GLU HIS ARG ALA ALA SEQRES 18 A 704 TRP LEU LEU ALA LYS GLN GLU ARG ASN GLY PHE PRO PHE SEQRES 19 A 704 ASP THR LYS ALA ILE GLU GLU LEU TYR VAL GLU LEU ALA SEQRES 20 A 704 ALA ARG ARG SER GLU LEU LEU ARG LYS LEU THR GLU THR SEQRES 21 A 704 PHE GLY SER TRP TYR GLN PRO LYS GLY GLY THR GLU MET SEQRES 22 A 704 PHE CYS HIS PRO ARG THR GLY LYS PRO LEU PRO LYS TYR SEQRES 23 A 704 PRO ARG ILE LYS THR PRO LYS VAL GLY GLY ILE PHE LYS SEQRES 24 A 704 LYS PRO LYS ASN LYS ALA GLN ARG GLU GLY ARG GLU PRO SEQRES 25 A 704 CYS GLU LEU ASP THR ARG GLU TYR VAL ALA GLY ALA PRO SEQRES 26 A 704 TYR THR PRO VAL GLU HIS VAL VAL PHE ASN PRO SER SER SEQRES 27 A 704 ARG ASP HIS ILE GLN LYS LYS LEU GLN GLU ALA GLY TRP SEQRES 28 A 704 VAL PRO THR LYS TYR THR ASP LYS GLY ALA PRO VAL VAL SEQRES 29 A 704 ASP ASP GLU VAL LEU GLU GLY VAL ARG VAL ASP ASP PRO SEQRES 30 A 704 GLU LYS GLN ALA ALA ILE ASP LEU ILE LYS GLU TYR LEU SEQRES 31 A 704 MET ILE GLN LYS ARG ILE GLY GLN SER ALA GLU GLY ASP SEQRES 32 A 704 LYS ALA TRP LEU ARG TYR VAL ALA GLU ASP GLY LYS ILE SEQRES 33 A 704 HIS GLY SER VAL ASN PRO ASN GLY ALA VAL THR GLY ARG SEQRES 34 A 704 ALA THR HIS ALA PHE PRO ASN LEU ALA GLN ILE PRO GLY SEQRES 35 A 704 VAL ARG SER PRO TYR GLY GLU GLN CYS ARG ALA ALA PHE SEQRES 36 A 704 GLY ALA GLU HIS HIS LEU ASP GLY ILE THR GLY LYS PRO SEQRES 37 A 704 TRP VAL GLN ALA GLY ILE ASP ALA SER GLY LEU GLU LEU SEQRES 38 A 704 ARG CYS LEU ALA HIS PHE MET ALA ARG PHE ASP ASN GLY SEQRES 39 A 704 GLU TYR ALA HIS GLU ILE LEU ASN GLY ASP ILE HIS THR SEQRES 40 A 704 LYS ASN GLN ILE ALA ALA GLU LEU PRO THR ARG ASP ASN SEQRES 41 A 704 ALA LYS THR PHE ILE TYR GLY PHE LEU TYR GLY ALA GLY SEQRES 42 A 704 ASP GLU LYS ILE GLY GLN ILE VAL GLY ALA GLY LYS GLU SEQRES 43 A 704 ARG GLY LYS GLU LEU LYS LYS LYS PHE LEU GLU ASN THR SEQRES 44 A 704 PRO ALA ILE ALA ALA LEU ARG GLU SER ILE GLN GLN THR SEQRES 45 A 704 LEU VAL GLU SER SER GLN TRP VAL ALA GLY GLU GLN GLN SEQRES 46 A 704 VAL LYS TRP LYS ARG ARG TRP ILE LYS GLY LEU ASP GLY SEQRES 47 A 704 ARG LYS VAL HIS VAL ARG SER PRO HIS ALA ALA LEU ASN SEQRES 48 A 704 THR LEU LEU GLN SER ALA GLY ALA LEU ILE CYS LYS LEU SEQRES 49 A 704 TRP ILE ILE LYS THR GLU GLU MET LEU VAL GLU LYS GLY SEQRES 50 A 704 LEU LYS HIS GLY TRP ASP GLY ASP PHE ALA TYR MET ALA SEQRES 51 A 704 TRP VAL HIS ASP GLU ILE GLN VAL GLY CYS ARG THR GLU SEQRES 52 A 704 GLU ILE ALA GLN VAL VAL ILE GLU THR ALA GLN GLU ALA SEQRES 53 A 704 MET ARG TRP VAL GLY ASP HIS TRP ASN PHE ARG CYS LEU SEQRES 54 A 704 LEU ASP THR GLU GLY LYS MET GLY PRO ASN TRP ALA ILE SEQRES 55 A 704 CYS HIS SEQRES 1 B 108 SER ASP LYS ILE ILE HIS LEU THR ASP ASP SER PHE ASP SEQRES 2 B 108 THR ASP VAL LEU LYS ALA ASP GLY ALA ILE LEU VAL ASP SEQRES 3 B 108 PHE TRP ALA GLU TRP CYS GLY PRO CYS LYS MET ILE ALA SEQRES 4 B 108 PRO ILE LEU ASP GLU ILE ALA ASP GLU TYR GLN GLY LYS SEQRES 5 B 108 LEU THR VAL ALA LYS LEU ASN ILE ASP GLN ASN PRO GLY SEQRES 6 B 108 THR ALA PRO LYS TYR GLY ILE ARG GLY ILE PRO THR LEU SEQRES 7 B 108 LEU LEU PHE LYS ASN GLY GLU VAL ALA ALA THR LYS VAL SEQRES 8 B 108 GLY ALA LEU SER LYS GLY GLN LEU LYS GLU PHE LEU ASP SEQRES 9 B 108 ALA ASN LEU ALA SEQRES 1 F 704 MET ILE VAL SER ALA ILE ALA ALA ASN ALA LEU LEU GLU SEQRES 2 F 704 SER VAL THR LYS PHE HIS CYS GLY VAL ILE TYR ASP TYR SEQRES 3 F 704 SER THR ALA GLU TYR VAL SER TYR ARG PRO SER ASP PHE SEQRES 4 F 704 GLY ALA TYR LEU ASP ALA LEU GLU ALA GLU VAL ALA ARG SEQRES 5 F 704 GLY GLY LEU ILE VAL PHE HIS ASN GLY HIS LYS TYR ASP SEQRES 6 F 704 VAL PRO ALA LEU THR LYS LEU ALA LYS LEU GLN LEU ASN SEQRES 7 F 704 ARG GLU PHE HIS LEU PRO ARG GLU ASN CYS ILE ASP THR SEQRES 8 F 704 LEU VAL LEU SER ARG LEU ILE HIS SER ASN LEU LYS ASP SEQRES 9 F 704 THR ASP MET GLY LEU LEU ARG SER GLY LYS LEU PRO GLY SEQRES 10 F 704 LYS ARG PHE GLY SER HIS ALA LEU GLU ALA TRP GLY TYR SEQRES 11 F 704 ARG LEU GLY GLU MET LYS GLY GLU TYR LYS ASP ASP PHE SEQRES 12 F 704 LYS ARG MET LEU GLU GLU GLN GLY GLU GLU TYR VAL ASP SEQRES 13 F 704 GLY MET GLU TRP TRP ASN PHE ASN GLU GLU MET MET ASP SEQRES 14 F 704 TYR ASN VAL GLN ASP VAL VAL VAL THR LYS ALA LEU LEU SEQRES 15 F 704 GLU LYS LEU LEU SER ASP LYS HIS TYR PHE PRO PRO GLU SEQRES 16 F 704 ILE ASP PHE THR ASP VAL GLY TYR THR THR PHE TRP SER SEQRES 17 F 704 GLU SER LEU GLU ALA VAL ASP ILE GLU HIS ARG ALA ALA SEQRES 18 F 704 TRP LEU LEU ALA LYS GLN GLU ARG ASN GLY PHE PRO PHE SEQRES 19 F 704 ASP THR LYS ALA ILE GLU GLU LEU TYR VAL GLU LEU ALA SEQRES 20 F 704 ALA ARG ARG SER GLU LEU LEU ARG LYS LEU THR GLU THR SEQRES 21 F 704 PHE GLY SER TRP TYR GLN PRO LYS GLY GLY THR GLU MET SEQRES 22 F 704 PHE CYS HIS PRO ARG THR GLY LYS PRO LEU PRO LYS TYR SEQRES 23 F 704 PRO ARG ILE LYS THR PRO LYS VAL GLY GLY ILE PHE LYS SEQRES 24 F 704 LYS PRO LYS ASN LYS ALA GLN ARG GLU GLY ARG GLU PRO SEQRES 25 F 704 CYS GLU LEU ASP THR ARG GLU TYR VAL ALA GLY ALA PRO SEQRES 26 F 704 TYR THR PRO VAL GLU HIS VAL VAL PHE ASN PRO SER SER SEQRES 27 F 704 ARG ASP HIS ILE GLN LYS LYS LEU GLN GLU ALA GLY TRP SEQRES 28 F 704 VAL PRO THR LYS TYR THR ASP LYS GLY ALA PRO VAL VAL SEQRES 29 F 704 ASP ASP GLU VAL LEU GLU GLY VAL ARG VAL ASP ASP PRO SEQRES 30 F 704 GLU LYS GLN ALA ALA ILE ASP LEU ILE LYS GLU TYR LEU SEQRES 31 F 704 MET ILE GLN LYS ARG ILE GLY GLN SER ALA GLU GLY ASP SEQRES 32 F 704 LYS ALA TRP LEU ARG TYR VAL ALA GLU ASP GLY LYS ILE SEQRES 33 F 704 HIS GLY SER VAL ASN PRO ASN GLY ALA VAL THR GLY ARG SEQRES 34 F 704 ALA THR HIS ALA PHE PRO ASN LEU ALA GLN ILE PRO GLY SEQRES 35 F 704 VAL ARG SER PRO TYR GLY GLU GLN CYS ARG ALA ALA PHE SEQRES 36 F 704 GLY ALA GLU HIS HIS LEU ASP GLY ILE THR GLY LYS PRO SEQRES 37 F 704 TRP VAL GLN ALA GLY ILE ASP ALA SER GLY LEU GLU LEU SEQRES 38 F 704 ARG CYS LEU ALA HIS PHE MET ALA ARG PHE ASP ASN GLY SEQRES 39 F 704 GLU TYR ALA HIS GLU ILE LEU ASN GLY ASP ILE HIS THR SEQRES 40 F 704 LYS ASN GLN ILE ALA ALA GLU LEU PRO THR ARG ASP ASN SEQRES 41 F 704 ALA LYS THR PHE ILE TYR GLY PHE LEU TYR GLY ALA GLY SEQRES 42 F 704 ASP GLU LYS ILE GLY GLN ILE VAL GLY ALA GLY LYS GLU SEQRES 43 F 704 ARG GLY LYS GLU LEU LYS LYS LYS PHE LEU GLU ASN THR SEQRES 44 F 704 PRO ALA ILE ALA ALA LEU ARG GLU SER ILE GLN GLN THR SEQRES 45 F 704 LEU VAL GLU SER SER GLN TRP VAL ALA GLY GLU GLN GLN SEQRES 46 F 704 VAL LYS TRP LYS ARG ARG TRP ILE LYS GLY LEU ASP GLY SEQRES 47 F 704 ARG LYS VAL HIS VAL ARG SER PRO HIS ALA ALA LEU ASN SEQRES 48 F 704 THR LEU LEU GLN SER ALA GLY ALA LEU ILE CYS LYS LEU SEQRES 49 F 704 TRP ILE ILE LYS THR GLU GLU MET LEU VAL GLU LYS GLY SEQRES 50 F 704 LEU LYS HIS GLY TRP ASP GLY ASP PHE ALA TYR MET ALA SEQRES 51 F 704 TRP VAL HIS ASP GLU ILE GLN VAL GLY CYS ARG THR GLU SEQRES 52 F 704 GLU ILE ALA GLN VAL VAL ILE GLU THR ALA GLN GLU ALA SEQRES 53 F 704 MET ARG TRP VAL GLY ASP HIS TRP ASN PHE ARG CYS LEU SEQRES 54 F 704 LEU ASP THR GLU GLY LYS MET GLY PRO ASN TRP ALA ILE SEQRES 55 F 704 CYS HIS SEQRES 1 I 108 SER ASP LYS ILE ILE HIS LEU THR ASP ASP SER PHE ASP SEQRES 2 I 108 THR ASP VAL LEU LYS ALA ASP GLY ALA ILE LEU VAL ASP SEQRES 3 I 108 PHE TRP ALA GLU TRP CYS GLY PRO CYS LYS MET ILE ALA SEQRES 4 I 108 PRO ILE LEU ASP GLU ILE ALA ASP GLU TYR GLN GLY LYS SEQRES 5 I 108 LEU THR VAL ALA LYS LEU ASN ILE ASP GLN ASN PRO GLY SEQRES 6 I 108 THR ALA PRO LYS TYR GLY ILE ARG GLY ILE PRO THR LEU SEQRES 7 I 108 LEU LEU PHE LYS ASN GLY GLU VAL ALA ALA THR LYS VAL SEQRES 8 I 108 GLY ALA LEU SER LYS GLY GLN LEU LYS GLU PHE LEU ASP SEQRES 9 I 108 ALA ASN LEU ALA MODRES 2AJQ 2DT P 822 DT 3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE MODRES 2AJQ 2DT X 922 DT 3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE HET 2DT P 822 19 HET 2DT X 922 19 HETNAM 2DT 3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE HETSYN 2DT 2',3'-DIDEOXYTHYMIDINE-5'-MONOPHOSPHATE FORMUL 1 2DT 2(C10 H15 N2 O7 P) FORMUL 9 HOH *414(H2 O) HELIX 1 1 LEU A 11 VAL A 15 5 5 HELIX 2 2 ARG A 35 SER A 37 5 3 HELIX 3 3 ASP A 38 ARG A 52 1 15 HELIX 4 4 TYR A 64 GLN A 76 1 13 HELIX 5 5 PRO A 84 GLU A 86 5 3 HELIX 6 6 THR A 91 HIS A 99 1 9 HELIX 7 7 ASN A 101 GLY A 113 1 13 HELIX 8 8 PRO A 116 PHE A 120 5 5 HELIX 9 9 ALA A 124 GLY A 133 1 10 HELIX 10 10 GLU A 138 GLU A 149 1 12 HELIX 11 11 ASN A 164 SER A 187 1 24 HELIX 12 12 ASP A 197 VAL A 201 5 5 HELIX 13 13 GLY A 202 SER A 210 1 9 HELIX 14 14 LEU A 211 GLY A 231 1 21 HELIX 15 15 ASP A 235 PHE A 261 1 27 HELIX 16 16 SER A 338 ALA A 349 1 12 HELIX 17 17 ASP A 365 VAL A 372 1 8 HELIX 18 18 ASP A 376 ALA A 400 1 25 HELIX 19 19 ALA A 405 TYR A 409 5 5 HELIX 20 20 ASN A 436 ILE A 440 5 5 HELIX 21 21 TYR A 447 ALA A 454 1 8 HELIX 22 22 PHE A 455 HIS A 460 5 6 HELIX 23 23 GLY A 478 ASN A 493 1 16 HELIX 24 24 GLY A 494 GLY A 503 1 10 HELIX 25 25 ASP A 504 GLU A 514 1 11 HELIX 26 26 THR A 517 TYR A 530 1 14 HELIX 27 27 GLY A 533 GLN A 539 1 7 HELIX 28 28 ILE A 540 GLY A 542 5 3 HELIX 29 29 GLY A 544 THR A 559 1 16 HELIX 30 30 THR A 559 LEU A 573 1 15 HELIX 31 31 SER A 605 HIS A 607 5 3 HELIX 32 32 ALA A 608 LYS A 636 1 29 HELIX 33 33 THR A 662 TRP A 684 1 23 HELIX 34 34 CYS B 32 TYR B 49 1 18 HELIX 35 35 GLY B 65 GLY B 71 1 7 HELIX 36 36 SER B 95 ASP B 104 1 10 HELIX 37 37 LEU F 11 VAL F 15 5 5 HELIX 38 38 ARG F 35 SER F 37 5 3 HELIX 39 39 ASP F 38 ARG F 52 1 15 HELIX 40 40 TYR F 64 GLN F 76 1 13 HELIX 41 41 PRO F 84 GLU F 86 5 3 HELIX 42 42 THR F 91 HIS F 99 1 9 HELIX 43 43 ASN F 101 ASP F 106 1 6 HELIX 44 44 ASP F 106 GLY F 113 1 8 HELIX 45 45 ALA F 124 LEU F 132 1 9 HELIX 46 46 LYS F 140 ARG F 145 1 6 HELIX 47 47 MET F 146 GLU F 148 5 3 HELIX 48 48 GLU F 166 SER F 187 1 22 HELIX 49 49 ASP F 197 VAL F 201 5 5 HELIX 50 50 GLY F 202 SER F 210 1 9 HELIX 51 51 LEU F 211 GLY F 231 1 21 HELIX 52 52 ASP F 235 GLY F 262 1 28 HELIX 53 53 SER F 338 ALA F 349 1 12 HELIX 54 54 ASP F 365 GLU F 370 1 6 HELIX 55 55 ASP F 376 ALA F 400 1 25 HELIX 56 56 ALA F 405 VAL F 410 1 6 HELIX 57 57 TYR F 447 ALA F 454 1 8 HELIX 58 58 PHE F 455 HIS F 460 5 6 HELIX 59 59 GLY F 478 MET F 488 1 11 HELIX 60 60 MET F 488 ASN F 493 1 6 HELIX 61 61 GLU F 495 GLY F 503 1 9 HELIX 62 62 ASP F 504 GLU F 514 1 11 HELIX 63 63 THR F 517 TYR F 530 1 14 HELIX 64 64 GLY F 533 GLN F 539 1 7 HELIX 65 65 ILE F 540 GLY F 542 5 3 HELIX 66 66 GLY F 544 THR F 559 1 16 HELIX 67 67 THR F 559 LEU F 573 1 15 HELIX 68 68 SER F 605 HIS F 607 5 3 HELIX 69 69 ALA F 608 LYS F 636 1 29 HELIX 70 70 THR F 662 TRP F 684 1 23 HELIX 71 71 CYS I 32 LEU I 42 1 11 HELIX 72 72 THR I 66 TYR I 70 5 5 HELIX 73 73 SER I 95 LEU I 103 1 9 SHEET 1 A 5 SER A 33 TYR A 34 0 SHEET 2 A 5 PHE A 18 ASP A 25 -1 N GLY A 21 O TYR A 34 SHEET 3 A 5 ILE A 2 ALA A 8 -1 N VAL A 3 O TYR A 24 SHEET 4 A 5 ILE A 56 PHE A 58 1 O VAL A 57 N SER A 4 SHEET 5 A 5 CYS A 88 ASP A 90 1 O ILE A 89 N ILE A 56 SHEET 1 B 2 PHE A 232 PRO A 233 0 SHEET 2 B 2 LYS A 415 ILE A 416 -1 O ILE A 416 N PHE A 232 SHEET 1 C 3 SER A 263 PRO A 267 0 SHEET 2 C 3 THR A 327 VAL A 333 -1 O VAL A 332 N TRP A 264 SHEET 3 C 3 GLY B 74 ILE B 75 -1 O ILE B 75 N THR A 327 SHEET 1 D 2 SER A 419 ASN A 421 0 SHEET 2 D 2 THR A 431 ALA A 433 -1 O THR A 431 N ASN A 421 SHEET 1 E 4 PHE A 646 VAL A 652 0 SHEET 2 E 4 GLU A 655 CYS A 660 -1 O GLY A 659 N ALA A 647 SHEET 3 E 4 VAL A 470 ALA A 476 -1 N VAL A 470 O CYS A 660 SHEET 4 E 4 THR A 692 GLY A 697 -1 O LYS A 695 N GLY A 473 SHEET 1 F 2 VAL A 574 VAL A 580 0 SHEET 2 F 2 GLU A 583 TRP A 588 -1 O GLN A 585 N GLN A 578 SHEET 1 G 2 TRP A 592 LYS A 594 0 SHEET 2 G 2 LYS A 600 HIS A 602 -1 O VAL A 601 N ILE A 593 SHEET 1 H 4 THR B 54 ASN B 59 0 SHEET 2 H 4 ALA B 22 TRP B 28 1 N ASP B 26 O LEU B 58 SHEET 3 H 4 THR B 77 LYS B 82 -1 O PHE B 81 N ILE B 23 SHEET 4 H 4 VAL B 86 VAL B 91 -1 O ALA B 88 N LEU B 80 SHEET 1 I 5 TYR F 31 TYR F 34 0 SHEET 2 I 5 PHE F 18 ASP F 25 -1 N ILE F 23 O VAL F 32 SHEET 3 I 5 ILE F 2 ALA F 8 -1 N VAL F 3 O TYR F 24 SHEET 4 I 5 ILE F 56 PHE F 58 1 O VAL F 57 N ILE F 2 SHEET 5 I 5 CYS F 88 ASP F 90 1 O ILE F 89 N ILE F 56 SHEET 1 J 2 PHE F 232 PRO F 233 0 SHEET 2 J 2 LYS F 415 ILE F 416 -1 O ILE F 416 N PHE F 232 SHEET 1 K 3 SER F 263 PRO F 267 0 SHEET 2 K 3 THR F 327 VAL F 333 -1 O VAL F 332 N TRP F 264 SHEET 3 K 3 GLY I 74 ILE I 75 -1 O ILE I 75 N THR F 327 SHEET 1 L 2 SER F 419 ASN F 421 0 SHEET 2 L 2 THR F 431 ALA F 433 -1 O ALA F 433 N SER F 419 SHEET 1 M 4 PHE F 646 TRP F 651 0 SHEET 2 M 4 GLU F 655 CYS F 660 -1 O GLY F 659 N ALA F 647 SHEET 3 M 4 VAL F 470 ALA F 476 -1 N ILE F 474 O ILE F 656 SHEET 4 M 4 THR F 692 GLY F 697 -1 O LYS F 695 N GLY F 473 SHEET 1 N 2 VAL F 574 VAL F 580 0 SHEET 2 N 2 GLU F 583 TRP F 588 -1 O GLN F 585 N GLN F 578 SHEET 1 O 2 TRP F 592 LYS F 594 0 SHEET 2 O 2 LYS F 600 HIS F 602 -1 O VAL F 601 N ILE F 593 SHEET 1 P 4 LYS I 57 ASN I 59 0 SHEET 2 P 4 LEU I 24 TRP I 28 1 N ASP I 26 O LEU I 58 SHEET 3 P 4 THR I 77 LEU I 80 -1 O THR I 77 N PHE I 27 SHEET 4 P 4 LYS I 90 VAL I 91 -1 O LYS I 90 N LEU I 78 LINK O3' DA P 821 P 2DT P 822 1555 1555 1.60 LINK O3' DA X 921 P 2DT X 922 1555 1555 1.60 CISPEP 1 PHE A 434 PRO A 435 0 -0.62 CISPEP 2 ILE B 75 PRO B 76 0 0.00 CISPEP 3 PHE F 434 PRO F 435 0 -0.40 CISPEP 4 ILE I 75 PRO I 76 0 -0.11 CRYST1 168.312 169.235 179.788 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005941 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005909 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005562 0.00000