PDB Short entry for 2AWT HEADER PROTEIN TRANSPORT 02-SEP-05 2AWT TITLE SOLUTION STRUCTURE OF HUMAN SMALL UBIQUITIN-LIKE MODIFIER PROTEIN TITLE 2 ISOFORM 2 (SUMO-2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: SMALL UBIQUITIN-RELATED MODIFIER 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SMALL UBIQUITIN-LIKE MODIFIER PROTEIN ISOFORM 2, SUMO-2, COMPND 5 UBIQUITIN-LIKE PROTEIN SMT3B, SMT3 HOMOLOG 2, SENTRIN-2, HSMT3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET32-XA-LIC KEYWDS UBIQUITIN FOLD, HALF-OPEN BARREL, TWO HELICES, PROTEIN TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.K.CHANG,Y.H.WANG,T.L.CHUNG,C.F.CHANG,S.S.L.LI,T.H.HUANG REVDAT 3 09-MAR-22 2AWT 1 REMARK REVDAT 2 24-FEB-09 2AWT 1 VERSN REVDAT 1 24-OCT-06 2AWT 0 JRNL AUTH C.K.CHANG,Y.H.WANG,T.L.CHUNG,C.F.CHANG,S.S.L.LI,T.H.HUANG JRNL TITL SOLUTION STRUCTURE OF HUMAN SMALL UBIQUITIN-LIKE MODIFIER JRNL TITL 2 PROTEIN ISOFORM 2 (SUMO-2) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUENTERT (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 936 TOTAL RESTRAINTS, OF WHICH 856 ARE REMARK 3 NOE-DERIVED DISTANCE CONSTRAINTS, 59 ARE DIHEDRAL ANGLE REMARK 3 RESTRAINTS, 21 ARE DISTANCE RESTRAINTS FROM HYDROGEN BONDS REMARK 4 REMARK 4 2AWT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-SEP-05. REMARK 100 THE DEPOSITION ID IS D_1000034407. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 50MM SODIUM PHOSPHATE, 150MM REMARK 210 NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.8MM SUMO-2 U-15N, 13C; 50MM REMARK 210 PHOSPHATE BUFFER PH 6.0; 150MM REMARK 210 NACL; 1MM EDTA; 1MM DSS; 0.01% REMARK 210 SODIUM AZIDE; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY; HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA 1.1, CYANA 2.0 REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 7 59.61 -113.18 REMARK 500 1 ASN A 15 -74.18 -81.02 REMARK 500 1 SER A 54 79.97 -160.11 REMARK 500 1 THR A 70 34.63 -98.41 REMARK 500 1 MET A 78 68.15 -112.56 REMARK 500 1 GLN A 89 176.03 -57.60 REMARK 500 2 LYS A 5 71.74 -119.14 REMARK 500 2 ASN A 15 -75.52 -156.40 REMARK 500 2 HIS A 17 103.80 -160.54 REMARK 500 2 ASP A 26 -73.45 -79.43 REMARK 500 2 VAL A 29 112.33 -177.20 REMARK 500 2 SER A 54 80.05 -160.15 REMARK 500 2 ASP A 85 105.29 -55.15 REMARK 500 3 HIS A 17 113.11 -160.14 REMARK 500 3 ASP A 26 -73.09 -78.94 REMARK 500 3 VAL A 29 116.03 -177.65 REMARK 500 3 LYS A 35 -172.12 -62.16 REMARK 500 3 HIS A 37 59.95 -114.22 REMARK 500 3 SER A 54 80.02 -160.08 REMARK 500 3 GLN A 57 -48.15 -132.91 REMARK 500 3 MET A 78 68.25 -101.42 REMARK 500 3 GLN A 88 116.99 -160.22 REMARK 500 3 GLN A 89 -74.90 -101.93 REMARK 500 4 LYS A 5 74.36 -158.46 REMARK 500 4 ASN A 14 74.72 -114.85 REMARK 500 4 ASP A 26 -73.49 -78.95 REMARK 500 4 VAL A 29 116.15 -173.00 REMARK 500 4 LYS A 35 -175.25 -61.00 REMARK 500 4 GLU A 77 66.04 63.07 REMARK 500 4 GLU A 79 -167.15 -129.17 REMARK 500 4 GLN A 89 125.81 -174.77 REMARK 500 5 LYS A 5 72.59 -163.73 REMARK 500 5 GLU A 13 -61.59 -145.70 REMARK 500 5 HIS A 17 107.37 -160.28 REMARK 500 5 ASP A 26 -73.62 -79.50 REMARK 500 5 VAL A 29 109.81 -177.23 REMARK 500 5 LYS A 35 -179.08 -63.52 REMARK 500 5 SER A 54 87.54 -160.04 REMARK 500 5 MET A 78 52.26 -98.72 REMARK 500 5 GLU A 79 -167.67 -116.23 REMARK 500 5 GLN A 88 -74.41 -60.12 REMARK 500 6 ASP A 3 130.74 -170.06 REMARK 500 6 THR A 12 58.90 -153.66 REMARK 500 6 HIS A 17 98.64 -161.05 REMARK 500 6 ASP A 26 -73.49 -79.56 REMARK 500 6 LYS A 35 172.43 -53.22 REMARK 500 6 ARG A 50 -73.40 -80.63 REMARK 500 6 SER A 54 79.98 -150.94 REMARK 500 6 MET A 78 74.77 -104.34 REMARK 500 7 ASN A 14 -63.93 -132.11 REMARK 500 REMARK 500 THIS ENTRY HAS 182 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WM2 RELATED DB: PDB REMARK 900 RELATED ID: 1WM3 RELATED DB: PDB DBREF 2AWT A 1 95 UNP P61956 SUMO2_HUMAN 1 95 SEQRES 1 A 95 MET ALA ASP GLU LYS PRO LYS GLU GLY VAL LYS THR GLU SEQRES 2 A 95 ASN ASN ASP HIS ILE ASN LEU LYS VAL ALA GLY GLN ASP SEQRES 3 A 95 GLY SER VAL VAL GLN PHE LYS ILE LYS ARG HIS THR PRO SEQRES 4 A 95 LEU SER LYS LEU MET LYS ALA TYR CYS GLU ARG GLN GLY SEQRES 5 A 95 LEU SER MET ARG GLN ILE ARG PHE ARG PHE ASP GLY GLN SEQRES 6 A 95 PRO ILE ASN GLU THR ASP THR PRO ALA GLN LEU GLU MET SEQRES 7 A 95 GLU ASP GLU ASP THR ILE ASP VAL PHE GLN GLN GLN THR SEQRES 8 A 95 GLY GLY VAL TYR HELIX 1 1 LEU A 40 GLY A 52 1 13 SHEET 1 A 3 VAL A 29 ILE A 34 0 SHEET 2 A 3 ILE A 18 ALA A 23 -1 N ILE A 18 O ILE A 34 SHEET 3 A 3 ASP A 82 THR A 83 1 O ASP A 82 N LYS A 21 SHEET 1 B 3 GLN A 65 PRO A 66 0 SHEET 2 B 3 ARG A 59 PHE A 62 -1 N PHE A 62 O GLN A 65 SHEET 3 B 3 ASP A 85 PHE A 87 -1 O ASP A 85 N ARG A 61 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000