PDB Short entry for 2B4X HEADER BLOOD CLOTTING 27-SEP-05 2B4X TITLE CRYSTAL STRUCTURE OF ANTITHROMBIN-III CAVEAT 2B4X NAG A 1 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTITHROMBIN-III; COMPND 3 CHAIN: I; COMPND 4 SYNONYM: ATIII; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ANTITHROMBIN-III; COMPND 9 CHAIN: L; COMPND 10 SYNONYM: ATIII SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SERPINC1, AT3; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FRUIT FLY; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: S2; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMT/BIP/V5-HISA; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 OTHER_DETAILS: GENE SERPINC1, AT3 KEYWDS SERPIN; INHIBITOR; COAGULATION; PROTEASE, BLOOD CLOTTING EXPDTA X-RAY DIFFRACTION AUTHOR T.E.ADAMS,J.A.HUNTINGTON,D.J.D.JOHNSON,S.C.BOCK REVDAT 8 23-AUG-23 2B4X 1 REMARK REVDAT 7 20-OCT-21 2B4X 1 SEQADV HETSYN REVDAT 6 29-JUL-20 2B4X 1 CAVEAT COMPND REMARK HETNAM REVDAT 6 2 1 LINK SITE ATOM REVDAT 5 13-JUL-11 2B4X 1 VERSN REVDAT 4 24-FEB-09 2B4X 1 VERSN REVDAT 3 31-OCT-06 2B4X 1 TITLE REVDAT 2 17-OCT-06 2B4X 1 TITLE REVDAT 1 10-OCT-06 2B4X 0 JRNL AUTH T.E.ADAMS,J.A.HUNTINGTON,D.J.D.JOHNSON,S.C.BOCK JRNL TITL CRYSTAL STRUCTURE OF ANTITHROMBIN-III JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 927341.438 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 28243 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1442 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.97 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4431 REMARK 3 BIN R VALUE (WORKING SET) : 0.4220 REMARK 3 BIN FREE R VALUE : 0.4790 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 233 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.031 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6281 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 139 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 71.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -11.14000 REMARK 3 B22 (A**2) : 28.51000 REMARK 3 B33 (A**2) : -17.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -11.26000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM SIGMAA (A) : 0.70 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.55 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.79 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.850 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.670 ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.000 ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : 1.900 ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.130 ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.26 REMARK 3 BSOL : 39.03 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN.TOP REMARK 3 PARAMETER FILE 2 : WATER.TOP REMARK 3 PARAMETER FILE 3 : CARBOHYDRATE.TOP REMARK 3 PARAMETER FILE 4 : ION.TOP REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN_REP.PARAM REMARK 3 TOPOLOGY FILE 2 : WATER_REP.PARAM REMARK 3 TOPOLOGY FILE 3 : CARBOHYDRATE.PARAM REMARK 3 TOPOLOGY FILE 4 : ION.PARAM REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2B4X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-05. REMARK 100 THE DEPOSITION ID IS D_1000034679. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-APR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX10.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.488 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(III) REMARK 200 OPTICS : RH COATED COLLIMATING MIRROR, REMARK 200 DOUBLE CRYSTAL SI(III) REMARK 200 MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28263 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 86.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : 0.06500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.50800 REMARK 200 R SYM FOR SHELL (I) : 0.50800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ACCESSION: 1OYH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, SODIUM/POTASSIUM PHOSPHATE, REMARK 280 PH 6.7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.33500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, L, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA I 30 REMARK 465 THR I 31 REMARK 465 GLU I 32 REMARK 465 ASP I 33 REMARK 465 GLU I 34 REMARK 465 GLY I 35 REMARK 465 SER I 36 REMARK 465 ALA I 134 REMARK 465 ALA I 135 REMARK 465 VAL I 355 REMARK 465 ALA I 356 REMARK 465 GLU I 357 REMARK 465 GLY I 358 REMARK 465 ARG I 359 REMARK 465 GLU L 27 REMARK 465 LYS L 28 REMARK 465 LYS L 29 REMARK 465 ALA L 30 REMARK 465 THR L 31 REMARK 465 GLU L 32 REMARK 465 ASP L 33 REMARK 465 GLU L 34 REMARK 465 GLY L 35 REMARK 465 SER L 36 REMARK 465 GLU L 37 REMARK 465 GLN L 38 REMARK 465 LYS L 39 REMARK 465 ILE L 40 REMARK 465 PRO L 41 REMARK 465 GLU L 42 REMARK 465 ASN L 396 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE I 15 CG1 CG2 CD1 REMARK 470 ASN I 18 CG OD1 ND2 REMARK 470 MET I 20 SD CE REMARK 470 LYS I 28 CG CD CE NZ REMARK 470 GLN I 38 CG CD OE1 NE2 REMARK 470 LYS I 39 CG CD CE NZ REMARK 470 GLU I 42 CG CD OE1 OE2 REMARK 470 ARG I 46 CZ NH1 NH2 REMARK 470 ARG I 47 NE CZ NH1 NH2 REMARK 470 LYS I 70 CE NZ REMARK 470 GLN I 100 CD OE1 NE2 REMARK 470 ARG I 132 CG CD NE CZ NH1 NH2 REMARK 470 LYS I 136 CD CE NZ REMARK 470 LYS I 139 CB CG CD CE NZ REMARK 470 LYS I 150 CG CD CE NZ REMARK 470 LEU I 152 CG CD1 CD2 REMARK 470 PHE I 154 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN I 159 CG CD OE1 NE2 REMARK 470 LYS I 169 CE NZ REMARK 470 LYS I 176 CG CD CE NZ REMARK 470 GLU I 177 CB CG CD OE1 OE2 REMARK 470 LYS I 188 CG CD CE NZ REMARK 470 LYS I 193 CG CD CE NZ REMARK 470 LYS I 222 CD CE NZ REMARK 470 ARG I 235 NE CZ NH1 NH2 REMARK 470 LYS I 275 CD CE NZ REMARK 470 MET I 315 CB CG SD CE REMARK 470 LYS I 348 CD CE NZ REMARK 470 LYS I 350 CG CD CE NZ REMARK 470 LYS L 11 CG CD CE NZ REMARK 470 ARG L 13 CG CD NE CZ NH1 NH2 REMARK 470 ILE L 15 CG1 CG2 CD1 REMARK 470 MET L 17 CG SD CE REMARK 470 ASN L 18 CG OD1 ND2 REMARK 470 ARG L 24 CG CD NE CZ NH1 NH2 REMARK 470 ARG L 46 CG CD NE CZ NH1 NH2 REMARK 470 ARG L 47 CG CD NE CZ NH1 NH2 REMARK 470 GLU L 50 CG CD OE1 OE2 REMARK 470 LYS L 53 CG CD CE NZ REMARK 470 LYS L 70 CG CD CE NZ REMARK 470 LYS L 107 CG CD CE NZ REMARK 470 ILE L 111 CG1 CG2 CD1 REMARK 470 GLU L 113 CG CD OE1 OE2 REMARK 470 LYS L 114 CG CD CE NZ REMARK 470 GLN L 118 CG CD OE1 NE2 REMARK 470 LYS L 125 CG CD CE NZ REMARK 470 ARG L 129 CZ NH1 NH2 REMARK 470 ARG L 132 CG CD NE CZ NH1 NH2 REMARK 470 LYS L 136 CG CD CE NZ REMARK 470 LYS L 139 CE NZ REMARK 470 LYS L 150 CG CD CE NZ REMARK 470 LYS L 169 CE NZ REMARK 470 LYS L 176 CE NZ REMARK 470 GLU L 177 CG CD OE1 OE2 REMARK 470 ARG L 183 CG CD NE CZ NH1 NH2 REMARK 470 LYS L 188 CE NZ REMARK 470 GLU L 205 CG CD OE1 OE2 REMARK 470 LYS L 228 CD CE NZ REMARK 470 GLU L 232 CD OE1 OE2 REMARK 470 ARG L 235 CG CD NE CZ NH1 NH2 REMARK 470 LYS L 236 CG CD CE NZ REMARK 470 LEU L 238 CG CD1 CD2 REMARK 470 ASP L 243 CG OD1 OD2 REMARK 470 LYS L 257 CD CE NZ REMARK 470 LYS L 275 CD CE NZ REMARK 470 LYS L 287 CD CE NZ REMARK 470 GLU L 289 CG CD OE1 OE2 REMARK 470 LYS L 290 CG CD CE NZ REMARK 470 LYS L 297 CD CE NZ REMARK 470 LYS L 332 CD CE NZ REMARK 470 GLU L 333 CG CD OE1 OE2 REMARK 470 LYS L 348 CG CD CE NZ REMARK 470 LYS L 350 CD CE NZ REMARK 470 GLU L 357 CG CD OE1 OE2 REMARK 470 ARG L 393 CG CD NE CZ NH1 NH2 REMARK 470 LEU L 395 CB CG CD1 CD2 REMARK 470 ARG L 399 NE CZ NH1 NH2 REMARK 470 VAL L 400 CG1 CG2 REMARK 470 THR L 401 OG1 CG2 REMARK 470 PHE L 402 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG L 406 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO I 12 -31.60 -32.25 REMARK 500 PRO I 19 178.06 -58.82 REMARK 500 MET I 20 13.45 53.20 REMARK 500 CYS I 21 55.59 -147.70 REMARK 500 GLN I 38 94.16 -178.44 REMARK 500 ILE I 40 105.99 -17.09 REMARK 500 PRO I 41 -158.12 -75.63 REMARK 500 GLU I 42 -138.49 -57.22 REMARK 500 ALA I 43 76.01 -64.72 REMARK 500 SER I 69 4.34 -65.25 REMARK 500 PHE I 77 119.60 173.29 REMARK 500 LEU I 78 -159.78 -141.77 REMARK 500 SER I 79 83.53 -151.97 REMARK 500 SER I 82 -75.92 -54.56 REMARK 500 ALA I 86 -76.39 -68.95 REMARK 500 PHE I 87 -9.77 -53.25 REMARK 500 ASN I 96 -147.23 48.71 REMARK 500 LYS I 107 10.61 52.27 REMARK 500 SER I 112 121.60 -24.37 REMARK 500 GLU I 113 -38.61 66.37 REMARK 500 LYS I 114 136.25 -35.44 REMARK 500 SER I 116 -31.20 -37.76 REMARK 500 LEU I 130 -78.88 -62.42 REMARK 500 SER I 138 65.79 69.96 REMARK 500 LYS I 150 20.90 -71.58 REMARK 500 SER I 151 -146.41 -86.02 REMARK 500 LEU I 152 -179.83 -23.87 REMARK 500 ASN I 155 110.42 -32.05 REMARK 500 TYR I 158 -75.68 -51.64 REMARK 500 SER I 162 13.75 -67.91 REMARK 500 ALA I 168 121.24 174.76 REMARK 500 LEU I 170 -84.25 -37.65 REMARK 500 GLN I 171 94.42 83.64 REMARK 500 LYS I 176 -88.92 175.03 REMARK 500 SER I 182 -63.43 -94.06 REMARK 500 ARG I 183 54.37 -63.88 REMARK 500 ALA I 184 -29.60 -175.57 REMARK 500 ILE I 186 -72.62 -76.04 REMARK 500 SER I 191 -7.68 -53.29 REMARK 500 THR I 194 31.30 -76.32 REMARK 500 THR I 199 -78.48 -105.07 REMARK 500 PRO I 203 -174.06 -55.70 REMARK 500 ASN I 208 -134.52 -139.99 REMARK 500 GLU I 232 -14.06 -49.28 REMARK 500 ASP I 243 -87.68 -67.35 REMARK 500 GLU I 245 -162.66 -59.67 REMARK 500 ARG I 261 131.57 177.41 REMARK 500 VAL I 263 -168.82 -124.69 REMARK 500 ALA I 264 123.98 -29.38 REMARK 500 ASP I 277 -14.89 78.43 REMARK 500 REMARK 500 THIS ENTRY HAS 120 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG B 2 REMARK 610 NAG I 861 REMARK 610 NAG I 862 REMARK 610 NAG L 801 REMARK 610 NAG L 842 DBREF 2B4X I 5 431 UNP P01008 ANT3_HUMAN 37 463 DBREF 2B4X L 5 431 UNP P01008 ANT3_HUMAN 37 463 SEQADV 2B4X ALA I 135 UNP P01008 ASN 167 ENGINEERED MUTATION SEQADV 2B4X LEU I 220 UNP P01008 TYR 252 ENGINEERED MUTATION SEQRES 1 I 427 VAL ASP ILE CYS THR ALA LYS PRO ARG ASP ILE PRO MET SEQRES 2 I 427 ASN PRO MET CYS ILE TYR ARG SER PRO GLU LYS LYS ALA SEQRES 3 I 427 THR GLU ASP GLU GLY SER GLU GLN LYS ILE PRO GLU ALA SEQRES 4 I 427 THR ASN ARG ARG VAL TRP GLU LEU SER LYS ALA ASN SER SEQRES 5 I 427 ARG PHE ALA THR THR PHE TYR GLN HIS LEU ALA ASP SER SEQRES 6 I 427 LYS ASN ASP ASN ASP ASN ILE PHE LEU SER PRO LEU SER SEQRES 7 I 427 ILE SER THR ALA PHE ALA MET THR LYS LEU GLY ALA CYS SEQRES 8 I 427 ASN ASP THR LEU GLN GLN LEU MET GLU VAL PHE LYS PHE SEQRES 9 I 427 ASP THR ILE SER GLU LYS THR SER ASP GLN ILE HIS PHE SEQRES 10 I 427 PHE PHE ALA LYS LEU ASN CYS ARG LEU TYR ARG LYS ALA SEQRES 11 I 427 ALA LYS SER SER LYS LEU VAL SER ALA ASN ARG LEU PHE SEQRES 12 I 427 GLY ASP LYS SER LEU THR PHE ASN GLU THR TYR GLN ASP SEQRES 13 I 427 ILE SER GLU LEU VAL TYR GLY ALA LYS LEU GLN PRO LEU SEQRES 14 I 427 ASP PHE LYS GLU ASN ALA GLU GLN SER ARG ALA ALA ILE SEQRES 15 I 427 ASN LYS TRP VAL SER ASN LYS THR GLU GLY ARG ILE THR SEQRES 16 I 427 ASP VAL ILE PRO SER GLU ALA ILE ASN GLU LEU THR VAL SEQRES 17 I 427 LEU VAL LEU VAL ASN THR ILE LEU PHE LYS GLY LEU TRP SEQRES 18 I 427 LYS SER LYS PHE SER PRO GLU ASN THR ARG LYS GLU LEU SEQRES 19 I 427 PHE TYR LYS ALA ASP GLY GLU SER CYS SER ALA SER MET SEQRES 20 I 427 MET TYR GLN GLU GLY LYS PHE ARG TYR ARG ARG VAL ALA SEQRES 21 I 427 GLU GLY THR GLN VAL LEU GLU LEU PRO PHE LYS GLY ASP SEQRES 22 I 427 ASP ILE THR MET VAL LEU ILE LEU PRO LYS PRO GLU LYS SEQRES 23 I 427 SER LEU ALA LYS VAL GLU LYS GLU LEU THR PRO GLU VAL SEQRES 24 I 427 LEU GLN GLU TRP LEU ASP GLU LEU GLU GLU MET MET LEU SEQRES 25 I 427 VAL VAL HIS MET PRO ARG PHE ARG ILE GLU ASP GLY PHE SEQRES 26 I 427 SER LEU LYS GLU GLN LEU GLN ASP MET GLY LEU VAL ASP SEQRES 27 I 427 LEU PHE SER PRO GLU LYS SER LYS LEU PRO GLY ILE VAL SEQRES 28 I 427 ALA GLU GLY ARG ASP ASP LEU TYR VAL SER ASP ALA PHE SEQRES 29 I 427 HIS LYS ALA PHE LEU GLU VAL ASN GLU GLU GLY SER GLU SEQRES 30 I 427 ALA ALA ALA SER THR ALA VAL VAL ILE ALA GLY ARG SER SEQRES 31 I 427 LEU ASN PRO ASN ARG VAL THR PHE LYS ALA ASN ARG PRO SEQRES 32 I 427 PHE LEU VAL PHE ILE ARG GLU VAL PRO LEU ASN THR ILE SEQRES 33 I 427 ILE PHE MET GLY ARG VAL ALA ASN PRO CYS VAL SEQRES 1 L 427 VAL ASP ILE CYS THR ALA LYS PRO ARG ASP ILE PRO MET SEQRES 2 L 427 ASN PRO MET CYS ILE TYR ARG SER PRO GLU LYS LYS ALA SEQRES 3 L 427 THR GLU ASP GLU GLY SER GLU GLN LYS ILE PRO GLU ALA SEQRES 4 L 427 THR ASN ARG ARG VAL TRP GLU LEU SER LYS ALA ASN SER SEQRES 5 L 427 ARG PHE ALA THR THR PHE TYR GLN HIS LEU ALA ASP SER SEQRES 6 L 427 LYS ASN ASP ASN ASP ASN ILE PHE LEU SER PRO LEU SER SEQRES 7 L 427 ILE SER THR ALA PHE ALA MET THR LYS LEU GLY ALA CYS SEQRES 8 L 427 ASN ASP THR LEU GLN GLN LEU MET GLU VAL PHE LYS PHE SEQRES 9 L 427 ASP THR ILE SER GLU LYS THR SER ASP GLN ILE HIS PHE SEQRES 10 L 427 PHE PHE ALA LYS LEU ASN CYS ARG LEU TYR ARG LYS ALA SEQRES 11 L 427 ASN LYS SER SER LYS LEU VAL SER ALA ASN ARG LEU PHE SEQRES 12 L 427 GLY ASP LYS SER LEU THR PHE ASN GLU THR TYR GLN ASP SEQRES 13 L 427 ILE SER GLU LEU VAL TYR GLY ALA LYS LEU GLN PRO LEU SEQRES 14 L 427 ASP PHE LYS GLU ASN ALA GLU GLN SER ARG ALA ALA ILE SEQRES 15 L 427 ASN LYS TRP VAL SER ASN LYS THR GLU GLY ARG ILE THR SEQRES 16 L 427 ASP VAL ILE PRO SER GLU ALA ILE ASN GLU LEU THR VAL SEQRES 17 L 427 LEU VAL LEU VAL ASN THR ILE TYR PHE LYS GLY LEU TRP SEQRES 18 L 427 LYS SER LYS PHE SER PRO GLU ASN THR ARG LYS GLU LEU SEQRES 19 L 427 PHE TYR LYS ALA ASP GLY GLU SER CYS SER ALA SER MET SEQRES 20 L 427 MET TYR GLN GLU GLY LYS PHE ARG TYR ARG ARG VAL ALA SEQRES 21 L 427 GLU GLY THR GLN VAL LEU GLU LEU PRO PHE LYS GLY ASP SEQRES 22 L 427 ASP ILE THR MET VAL LEU ILE LEU PRO LYS PRO GLU LYS SEQRES 23 L 427 SER LEU ALA LYS VAL GLU LYS GLU LEU THR PRO GLU VAL SEQRES 24 L 427 LEU GLN GLU TRP LEU ASP GLU LEU GLU GLU MET MET LEU SEQRES 25 L 427 VAL VAL HIS MET PRO ARG PHE ARG ILE GLU ASP GLY PHE SEQRES 26 L 427 SER LEU LYS GLU GLN LEU GLN ASP MET GLY LEU VAL ASP SEQRES 27 L 427 LEU PHE SER PRO GLU LYS SER LYS LEU PRO GLY ILE VAL SEQRES 28 L 427 ALA GLU GLY ARG ASP ASP LEU TYR VAL SER ASP ALA PHE SEQRES 29 L 427 HIS LYS ALA PHE LEU GLU VAL ASN GLU GLU GLY SER GLU SEQRES 30 L 427 ALA ALA ALA SER THR ALA VAL VAL ILE ALA GLY ARG SER SEQRES 31 L 427 LEU ASN PRO ASN ARG VAL THR PHE LYS ALA ASN ARG PRO SEQRES 32 L 427 PHE LEU VAL PHE ILE ARG GLU VAL PRO LEU ASN THR ILE SEQRES 33 L 427 ILE PHE MET GLY ARG VAL ALA ASN PRO CYS VAL MODRES 2B4X ASN I 96 ASN GLYCOSYLATION SITE MODRES 2B4X ASN I 155 ASN GLYCOSYLATION SITE MODRES 2B4X ASN L 155 ASN GLYCOSYLATION SITE MODRES 2B4X ASN L 192 ASN GLYCOSYLATION SITE HET NAG A 1 14 HET NAG A 2 14 HET NAG B 1 14 HET NAG B 2 13 HET NAG I 801 14 HET NAG I 861 14 HET NAG I 862 14 HET NAG L 801 14 HET NAG L 841 14 HET NAG L 842 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 10(C8 H15 N O6) FORMUL 11 HOH *140(H2 O) HELIX 1 1 LYS I 11 ILE I 15 5 5 HELIX 2 2 ASN I 45 SER I 69 1 25 HELIX 3 3 SER I 79 LEU I 92 1 14 HELIX 4 4 CYS I 95 PHE I 106 1 12 HELIX 5 5 LYS I 107 ILE I 111 5 5 HELIX 6 6 THR I 115 TYR I 131 1 17 HELIX 7 7 ASN I 155 VAL I 165 1 11 HELIX 8 8 ALA I 184 THR I 194 1 11 HELIX 9 9 SER I 230 THR I 234 5 5 HELIX 10 10 ALA I 264 GLY I 266 5 3 HELIX 11 11 SER I 291 LEU I 299 1 9 HELIX 12 12 THR I 300 GLU I 310 1 11 HELIX 13 13 LEU I 331 MET I 338 1 8 HELIX 14 14 THR L 44 ASP L 68 1 25 HELIX 15 15 SER L 79 LEU L 92 1 14 HELIX 16 16 ASP L 97 PHE L 106 1 10 HELIX 17 17 ASP L 117 ARG L 132 1 16 HELIX 18 18 ASN L 155 TYR L 166 1 12 HELIX 19 19 ASN L 178 THR L 194 1 17 HELIX 20 20 LEU L 292 LYS L 297 1 6 HELIX 21 21 GLU L 302 LEU L 311 1 10 HELIX 22 22 LEU L 331 MET L 338 1 8 HELIX 23 23 VAL L 341 SER L 345 5 5 SHEET 1 A 6 ILE I 76 LEU I 78 0 SHEET 2 A 6 THR I 419 VAL I 426 -1 O MET I 423 N LEU I 78 SHEET 3 A 6 PHE I 408 GLU I 414 -1 N PHE I 408 O VAL I 426 SHEET 4 A 6 ILE I 279 LEU I 285 -1 N THR I 280 O ARG I 413 SHEET 5 A 6 THR I 267 PRO I 273 -1 N GLN I 268 O LEU I 285 SHEET 6 A 6 ARG I 262 VAL I 263 -1 N VAL I 263 O THR I 267 SHEET 1 B 5 PRO I 172 LEU I 173 0 SHEET 2 B 5 LYS I 139 ASP I 149 1 N GLY I 148 O LEU I 173 SHEET 3 B 5 LEU I 213 LYS I 222 -1 O VAL I 214 N PHE I 147 SHEET 4 B 5 ASP I 366 VAL I 375 1 O PHE I 368 N LEU I 215 SHEET 5 B 5 PHE I 323 SER I 330 -1 N PHE I 323 O VAL I 375 SHEET 1 C 4 ARG I 235 PHE I 239 0 SHEET 2 C 4 CYS I 247 TYR I 260 -1 O ALA I 249 N GLU I 237 SHEET 3 C 4 GLU I 312 PRO I 321 -1 O GLU I 312 N TYR I 260 SHEET 4 C 4 VAL I 400 LYS I 403 1 O PHE I 402 N HIS I 319 SHEET 1 D 3 ALA I 387 ILE I 390 0 SHEET 2 D 3 GLU L 312 PRO L 321 1 O VAL L 317 N ALA I 387 SHEET 3 D 3 MET L 251 TYR L 260 -1 N MET L 252 O MET L 320 SHEET 1 E 5 ILE L 76 LEU L 78 0 SHEET 2 E 5 THR L 419 VAL L 426 -1 O MET L 423 N LEU L 78 SHEET 3 E 5 PHE L 408 GLU L 414 -1 N PHE L 408 O VAL L 426 SHEET 4 E 5 ILE L 279 LEU L 285 -1 N THR L 280 O ARG L 413 SHEET 5 E 5 GLN L 268 PRO L 273 -1 N GLN L 268 O LEU L 285 SHEET 1 F 6 LYS L 169 LEU L 173 0 SHEET 2 F 6 LYS L 139 ASP L 149 1 N LEU L 146 O LYS L 169 SHEET 3 F 6 VAL L 214 LEU L 224 -1 O TYR L 220 N VAL L 141 SHEET 4 F 6 GLY L 379 ILE L 390 -1 O ALA L 382 N PHE L 221 SHEET 5 F 6 VAL L 364 VAL L 375 -1 N PHE L 368 O ALA L 387 SHEET 6 F 6 PHE L 323 SER L 330 -1 N ASP L 327 O ALA L 371 SHEET 1 G 2 LEU L 238 TYR L 240 0 SHEET 2 G 2 SER L 246 SER L 248 -1 O CYS L 247 N PHE L 239 SSBOND 1 CYS I 8 CYS I 128 1555 1555 2.04 SSBOND 2 CYS I 21 CYS I 95 1555 1555 2.04 SSBOND 3 CYS I 247 CYS I 430 1555 1555 2.04 SSBOND 4 CYS L 8 CYS L 128 1555 1555 2.03 SSBOND 5 CYS L 21 CYS L 95 1555 1555 2.03 SSBOND 6 CYS L 247 CYS L 430 1555 1555 2.04 LINK ND2 ASN I 96 C1 NAG I 801 1555 1555 1.45 LINK ND2 ASN I 155 C1 NAG A 1 1555 1555 1.47 LINK ND2 ASN L 155 C1 NAG L 841 1555 1555 1.44 LINK ND2 ASN L 192 C1 NAG B 1 1555 1555 1.45 LINK O4 NAG A 1 C1 NAG A 2 1555 1555 1.39 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.39 CRYST1 68.470 98.670 89.240 90.00 105.00 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014600 0.000000 0.003910 0.00000 SCALE2 0.000000 0.010130 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011600 0.00000